Kryptolebias marmoratus (mangrove rivulus): 108249527
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Entry
108249527 CDS
T05608
Symbol
si:dkey-38p12.3
Name
(RefSeq) ephexin-1 isoform X1
KO
K20687
Rho guanine nucleotide exchange factor 15
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
kmr04131
]
108249527 (si:dkey-38p12.3)
Membrane trafficking [BR:
kmr04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
108249527 (si:dkey-38p12.3)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SH3_1
SH3_2
SH3_9
PH
SOS1_NGEF_PH
RHG20_PH
Motif
Other DBs
NCBI-GeneID:
108249527
NCBI-ProteinID:
XP_017294461
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All DBs
Position
LG7:10690384..10711423
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AA seq
933 aa
AA seq
DB search
MSKQEQPTPRLRPGPVVTRRSSLLFADRDGSSEPSEGKVKEIMNKFQRRESRDLEELAAN
GYSELPICKKPPAVKPKPGRLGQSNVPQQAPPLPRKRSRFLPKKEAIVGGVEPKGTSTEG
GRSDPDGKEVEAQVAGGGVAEAEHNGEAAVPFCSNQSCGCLCHVQRPGMMLIWVPVDVEA
AEKKKKGVPEKKQTPKEAKGRKKDKEVDGGGDGDSKAKDEADAAPVKEKPLTKQIKPDFQ
EHLESLFASQHRPAEPGTHATSNHYQPSLVPLKPAPSPAAAPEPPPQDDEEENIYEVNLP
GVELFPKKTLAVSDVLKFSESNDLKPRGQPDAPGAASNAAPAAVEPGPSPGDVPPARPPK
TPKATSTPAPSRPPPPPPPAPATLPKKDLRRPSDGSVNSLKTGEENGKNEEKEAKDPRVF
ALRTHLHNEPLYQMYRKTVITKEIRRQTVNRNISKTSADFPTEWTARRKGSDASAFSDDG
NSSTLWQQLPEVRDSGVLERLSAEELKYQESMFEVLTSEASYLRSLRILTEHFLENRELN
ETLVIRDRKTLFSNILRIREVSERFLKDLDDHIYKDVVFSDICGIIHYHSQHNFPAYIDY
VRNQIYQEKTFSELKKNNVQFATVIKHLQESPQCQRLPFVSFLLLPFQRITRIKMLIENI
LKRTKQGTKEEQEASKALDSVSKIIDKCNTEVGKMRQVEELVHLFHTLDFDGKVKAIPII
SETRYLEKKGELQEMSRGKTIVSTRIKFSPVNLFLFNDLLIITAKKSGERFMVVDYAHRS
LVQVQPIDEVSSITCENCFNLVMLENCQGREIERLLKAPSQADLHRWLAAFPDSAIQDDE
ERIYEEYDCPQVQCVEQYVAEQADELNLEPTDIINIIRKTNEGWYEGSRLSDGQRGWFPV
ANVIEITNEHVRRRNLLERYRVTQAASMLSKTR
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagcaggagcaacccacgccgcgcctccggccaggacccgtggtcacccgccgc
tcgtctctgcttttcgccgacagagacggcagctcagagccttctgaggggaaggtcaaa
gaaatcatgaacaagttccagaggcgggaatccagagacctggaggagctcgccgccaac
ggctactcggagctcccgatctgcaaaaagccacctgcggtgaagcccaagccgggccgc
ctcggccagagcaacgtgccccagcaggcgccgccgctgcccaggaagagaagccgcttc
ctgcccaaaaaggaggcgattgtgggcggagtggagcccaaaggtacgagcacagaagga
gggcgatcagaccccgacgggaaggaggtggaagctcaggtggcgggaggcggcgtagct
gaggcggagcacaacggagaagcggctgtgccgttttgctccaaccagagctgcggctgc
ctgtgccacgtccagcggccgggcatgatgctcatctgggtgcccgtggacgtggaagca
gccgagaagaagaagaagggcgtacccgagaaaaaacagacgccgaaggaggcgaagggc
cgcaagaaggacaaggaggtagatggggggggggacggggacagcaaggccaaagacgag
gcggacgccgctcccgttaaggagaaaccgctgacgaaacagataaaaccagatttccag
gagcatttggaaagtttgttcgcatcgcagcacaggccggcggagccaggcactcatgcc
accagtaaccactatcagccgtctctggttcctctgaaacccgcgccgtcgccggcagct
gcgcccgagccacccccgcaagacgacgaagaggaaaatatctacgaggtcaatctcccc
ggggttgagctgttcccgaaaaaaacactcgcggtcagcgacgtgctgaagttctccgaa
agcaacgacctgaagccccgcggtcagcccgacgcgcccggcgccgcatcaaacgccgcg
cctgctgcggtggagcccggcccgagtcccggcgacgtccctcccgcccgcccgcccaag
actcccaaggcgacgagcaccccggcgccgagcagaccccctccgccgccgccgccagca
ccagcaacgctaccgaagaaagacctcaggaggcccagcgacggttctgtgaactccctg
aaaacaggagaggagaacggaaagaacgaggaaaaagaggccaaagacccgagggtgttt
gcgttaaggacccacctccacaacgagcctctgtatcagatgtaccgcaagaccgtgatc
acaaaggagatccgtcggcagactgtgaaccgcaacatcagtaaaaccagcgccgacttc
cccacggagtggacggcccgcaggaagggctccgacgcgtcggctttcagcgacgacggc
aacagcagcactctgtggcagcagctccccgaagtccgggacagcggcgtgctggagcgg
ctctccgccgaagagctgaagtaccaggagagcatgttcgaggttctgacctcggaggcc
tcttacctgcgatccctccgcatcctgaccgaacacttcctggagaaccgggagctgaac
gagacgttggtcatcagagacaggaagaccctcttctccaacatcctgaggattcgcgag
gtcagcgagaggttcctgaaagacctggacgaccacatctacaaggacgtagtcttctcg
gacatctgcggcataatccactaccactcgcagcacaactttcccgcctacatcgactac
gtccgcaaccagatctaccaagagaagaccttctccgagctcaagaagaacaacgtgcag
ttcgccacggtgatcaaacacctccaagagtcgcctcagtgccagcggctgcccttcgtc
tccttcctgctgcttcccttccagcgaataacccgcatcaaaatgctcatcgagaacatc
ctgaagagaacaaagcaggggacgaaagaggagcaggaggccagcaaggctctggattca
gtgtccaagattatcgacaagtgtaacacggaggtggggaagatgagacaggtggaggag
ctggttcacctctttcacacgctggactttgatggtaaagtcaaggccatcccaatcatc
tcggagactcggtacctggagaagaagggcgagcttcaggagatgtccagagggaagacc
attgtcagcacgaggataaagttcagccctgtgaacctcttcctgttcaacgacctgctc
atcatcactgccaagaaaagcggggagcgtttcatggtggtggactacgctcaccgctct
ctggtgcaggtgcagccgatagacgaggtcagcagcatcacctgtgagaactgcttcaac
ttggtcatgctggagaactgccagggacgcgagattgagcggctcctcaaagcgccttcc
caggctgacctgcacaggtggctggcggcttttccggactccgccatccaagacgacgag
gagaggatttacgaggaatacgactgtcctcaggtgcagtgcgtggagcagtacgtcgca
gagcaggcggacgagctcaacctggagcccacggacatcatcaacatcatccgcaaaacc
aacgaaggttggtacgaagggagccgcctgtccgacggtcagaggggttggttccccgtc
gccaacgtcatagagatcaccaacgagcacgtgcggagaaggaacctcctggagcgctac
agggtcactcaggccgcgagcatgctcagcaagacccgctga
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