Kryptolebias marmoratus (mangrove rivulus): 108249750
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Entry
108249750 CDS
T05608
Name
(RefSeq) 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-1 isoform X3
KO
K05858
phosphatidylinositol phospholipase C, beta [EC:
3.1.4.11
]
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr00562
Inositol phosphate metabolism
kmr01100
Metabolic pathways
kmr04020
Calcium signaling pathway
kmr04070
Phosphatidylinositol signaling system
kmr04081
Hormone signaling
kmr04082
Neuroactive ligand signaling
kmr04261
Adrenergic signaling in cardiomyocytes
kmr04270
Vascular smooth muscle contraction
kmr04310
Wnt signaling pathway
kmr04371
Apelin signaling pathway
kmr04540
Gap junction
kmr04621
NOD-like receptor signaling pathway
kmr04912
GnRH signaling pathway
kmr04916
Melanogenesis
Module
kmr_M00130
Inositol phosphate metabolism, PI=> PIP2 => Ins(1,4,5)P3 => Ins(1,3,4,5)P4
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00562 Inositol phosphate metabolism
108249750
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
108249750
04371 Apelin signaling pathway
108249750
04020 Calcium signaling pathway
108249750
04070 Phosphatidylinositol signaling system
108249750
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
108249750
04081 Hormone signaling
108249750
09140 Cellular Processes
09144 Cellular community - eukaryotes
04540 Gap junction
108249750
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
108249750
09152 Endocrine system
04912 GnRH signaling pathway
108249750
04916 Melanogenesis
108249750
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
108249750
04270 Vascular smooth muscle contraction
108249750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
kmr04131
]
108249750
Enzymes [BR:
kmr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.11 phosphoinositide phospholipase C
108249750
Membrane trafficking [BR:
kmr04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
108249750
Endocytosis
Macropinocytosis
Phospholipase C
108249750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PI-PLC-X
PLC-beta_C
PI-PLC-Y
PH_14
PLCB1-4-like_EFh
EF-hand_like
C2
DUF4277
Motif
Other DBs
NCBI-GeneID:
108249750
NCBI-ProteinID:
XP_017294815
LinkDB
All DBs
Position
LG22:1853141..1908770
Genome browser
AA seq
1161 aa
AA seq
DB search
MASAQPGVHALKLQPPSVSHTLRNGSNFIKWDEDLSTVTPVTLHVDPHGFYLYWTDQNKD
TELLDLTFVKDVRTGRSTKTAKEAKLRELLDVGNLVGRLENRMVTVVTASDVVNVTPLNF
IASQEDEAKLWCENLFSLSSNLLSYNLNRDHSLLKAYVRLTLQPNAEGRIPVKNFVRLFS
TDRKRVENALESCKLPYGRGDSIKLEDFTQDVYRNFLDSLCPRPELNNIFKIQGGDGGTI
SVDQMTEFINNKQRDPRLNEILYPPLRPTQTHSLMERYQQDQAQLKQGVISLQAFSSYLS
SDENGVIPPEKLDQSEDMSFPLSHYFINSSHNTYLTAGQLAGSSSVEMYRQVLLAGCRCV
ELDVWKGRTAEEEPVITHGFTMTSEISFKEVIEAIAECAFKTSPFPVILSFENHVDSLKQ
QAKMAEYCRTIFGDALLIDPLDKYPLEHGVPLPSPQELMGKILIKNKKSHKPSNNTDTKR
LIDQPANQSNEPVSPSNTTGEMEAESEEDDDDEDDDGKKGSAEREAVATEEMSTLVNYVQ
PTKFNSFEASKKAARCYHMSSFVETKALEHLTKSPVEFVEYNKSQLSRIYPKGTRVDSSN
FMPQLFWNAGCQLVALNYQTIDLSMQLNLFMFEYNGRSGYRLKPEFMRRPDKHFDPFTEN
TVDGIVANTLSVKVISGQFLTERRVGVYVEVEMFGLPVDTRRKALKTKTSQNNNAINPVW
DEEPIIFKKVILPTLASLRIAAFEEGGKFIGHRIIPVSAIRPGYRYIGLRSEKNLCLILP
AIFVYIEVKDYVPDTFADVIEALSNPIRYVNLLEQRSKQLAALTLEDGEEETQAEEETDN
GAERKNDHRPAPLENGLSPTSGPAGHTPIATTPKASAANQQAATTDGGKPAAKTEDLVLS
VLIEIPACTLESLQQSKAYQKEQRRQFKELKELVRRHQKKTSELLRDFGNKYKKTARQCS
KSRGSGSDREKDERLEQLKDEQQQQLLTLRQEQYYSQKYLQREHIKTLTERLTSLAEESH
NLQIKKLKDICDKEKKELKRQMDRRRTEKINQAKTKEKHLAEEEKIEINKSYVNEVVQNI
KRLEETQAKRHDQLVEQHNDLLQEIQDQRLKLQAAVDSEFQEKFQRLPGEIHDFLQDRKM
EGRARSKSRPTTPHETLSEED
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtgctcagccgggggtccatgccttgaaactccagcctccctcggtctcacac
accctgaggaatggaagcaacttcattaaatgggatgaggatttatccactgttactcca
gtgactctacacgtagatcctcatggattttacctctactggaccgaccagaacaaggac
acagaactgttggacctaaccttcgtgaaggatgtcagaacggggagaagcaccaaaaca
gcaaaggaagctaagctgcgggagctgctcgatgtcgggaaccttgttggacggctggag
aaccgcatggttaccgtggttacggcctcggacgttgtaaacgtaaccccactgaacttc
attgcttcacaggaggacgaagccaagttgtggtgtgagaacctgttttctctgtcttcc
aacctgttgagctacaatctcaacagagaccacagtctgctgaaagcgtacgtcaggtta
actcttcagcccaacgcagaaggaaggattcctgtcaaaaactttgttcgactgttttca
acagacagaaagagagtggagaatgccctggagagctgcaagctgccttacggacggggc
gacagtattaaactggaggacttcactcaggacgtttaccggaacttcttggacagtctg
tgtcctcgtcctgagctcaacaacatcttcaaaatacaaggaggtgacggcgggacaata
tcagtggatcagatgacagaattcatcaacaacaagcagagagacccaaggctcaatgaa
atcctctaccctcctcttcgtcctacacagacacactctctgatggagaggtaccaacaa
gaccaagcacaactaaagcaaggtgtcatatctctgcaggctttttccagttatctgtcc
agtgatgagaacggagtcatcccaccggagaaactggaccagtctgaagacatgagcttc
cctctgtcccactatttcatcaattcatcacacaatacatacctcacagcgggccagctg
gcgggcagctcctcagtagagatgtacaggcaggtgttgctggcagggtgtcgttgtgtc
gaattagacgtgtggaaaggacgaacagctgaggaggaacctgtcataacccacggcttc
accatgacatcagaaatctcctttaaggaggtgattgaagccattgcggagtgcgcgttc
aagacttccccgttcccggtcatcctgtcatttgaaaaccacgtggactctttgaagcag
caggctaaaatggctgaatattgtcgaaccatttttggggacgcgctgctaattgaccct
ctggacaaataccctctggagcacggtgtcccccttcccagtcctcaggagctgatgggc
aaaattctcatcaagaataagaaatctcacaaaccctccaacaacacggacaccaagaga
ctaattgaccaacctgccaatcagagcaacgaaccagtgtctcctagcaacaccacagga
gagatggaggctgagagtgaggaagatgatgatgacgaagatgatgatggtaaaaagggc
tctgcagagcgagaggcagtggccacggaggaaatgtcaactctggtaaactacgtccag
ccaaccaagttcaactccttcgaagcatcaaagaaggcagcccgctgttaccacatgtcg
tcttttgtggaaaccaaagctttggagcacctcacaaagtcaccagtggagtttgtggaa
tataacaaatctcagctgagtcgtatttaccccaaaggaaccagagtggactcgtccaac
tttatgcctcaactattctggaatgctggttgtcaactggtggctctcaactaccaaact
attgatttgtccatgcagctgaacctcttcatgtttgagtacaatggtcggagcggctac
aggctgaaacccgagttcatgaggcgtccagacaaacactttgacccgttcacagaaaac
acagtggacggcatcgtagctaacactctgtccgtgaaggtgatctctgggcagtttctg
actgaacggagagtgggggtatatgtggaggtggagatgtttggacttcctgtggacacc
aggaggaaagctctgaagactaaaacctcccagaacaacaacgccatcaatccagtgtgg
gatgaagagccaatcatcttcaagaaggtgattctacccactctggcctcactgagaatt
gctgcttttgaggaaggagggaagtttataggccaccgaatcatcccagtgtctgccatc
agaccaggttatcgttacatcggcttgaggagtgagaaaaacctgtgtctaattttgccg
gccatctttgtttacattgaagtcaaagactacgttccagatacttttgcagatgtgatc
gaggctctgtccaaccccatccgatacgtcaacctcctggagcagagatccaagcagctg
gcagctctgactctggaggacggcgaggaggagacccaggcggaggaggagactgataac
ggcgcagagcgtaaaaacgatcacagaccagctccactggaaaatgggctcagccccacc
tctggtcctgcaggccacacccccatcgctacaacgccaaaggcctccgcagccaatcag
caagcagcaaccacagatggaggcaaaccagcagcaaaaactgaagacctggtgttaagt
gttttaattgagatcccagcatgcaccttggagagcctgcagcagtccaaggcttaccag
aaggagcagagacgtcagtttaaggagctgaaggagctggtgaggagacatcagaaaaaa
acctctgagcttctccgagacttcggcaacaagtacaagaagacggccaggcagtgtagc
aagagcaggggttcaggttcggaccgagagaaggacgagcgtctggagcagctgaaagac
gagcagcagcagcagctcctgactctgaggcaggaacagtactacagtcagaaatatctg
cagagagaacacattaaaacgctgacagagcgactgaccagtttagctgaggagagtcac
aacctgcagataaagaaactcaaagacatctgtgacaaggagaagaaggagctgaagagg
cagatggatcgtagaagaactgagaagatcaaccaggcgaagactaaagagaaacatcta
gctgaggaggagaaaattgaaattaataagtcctacgtcaacgaagtggttcagaacatt
aaacggctggaggagactcaggcgaagcgccacgatcagctggtggagcagcacaacgac
ctcctgcaggagatacaagaccagagactgaagctgcaggcggccgtggactcagagttc
caagagaagttccagcgtttgcctggagagattcacgacttcctgcaggacaggaagatg
gagggcagagctcgcagcaagtcccgccccaccactccgcacgaaaccctgtcagaggag
gactga
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