Kryptolebias marmoratus (mangrove rivulus): 108249761
Help
Entry
108249761 CDS
T05608
Symbol
clasp1a
Name
(RefSeq) CLIP-associating protein 1a
KO
K16578
CLIP-associating protein 1/2
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
kmr03036
]
108249761 (clasp1a)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
kmr04812
]
108249761 (clasp1a)
Chromosome and associated proteins [BR:
kmr03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
108249761 (clasp1a)
Cytoskeleton proteins [BR:
kmr04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
108249761 (clasp1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
HEAT_EF3_N
XMAP215_CLASP_TOG
CEP104-like_TOG
HEAT
HEAT_EZ
Vac14_Fab1_bd
Cnd1
ParcG
Adaptin_N
HEAT_DAAF5
MMS19_C
Sec7-like_HUS
Paxt-1_C
TAN
MMS19_N
Motif
Other DBs
NCBI-GeneID:
108249761
NCBI-ProteinID:
XP_037832091
LinkDB
All DBs
Position
LG6:1885504..1941506
Genome browser
AA seq
1475 aa
AA seq
DB search
MEPSMESCLSQVLQKDVGRRLQVGQEVIDYILDRDKSHDLEQDQTALDKMVDGIASSWVN
SSNFKVALLGLDLLSALVTRLQDRFRAQVGTVLPSLIDRLGDAKDQVREQDQTLLLKIMD
QAASPQYMWDRMLGGFKHKNNRTREGVCLCLIATLNTYGAQGLTLSKIVPHVCNLLGDPT
AQVRDGAMSCLVEIYRHVGERVRLDLSKKGLPQSRLNVIFSRFDEVQRSGNMILSSGSDK
NFEDEDSVDGGRSSSSSSSKAPPGGRRTVMSSVRRPSSASSTKTTGKEAAAGAVDEEDFI
KAFEDVPSAQIYSNRELEDQLTKIREVLSDDKHDWEHRVVALKKVRSLMLAGATDYEGFP
QQLRLLEAAFKLSAKDLRSQVVREACITLGFLSRRCYEFLDLMLQEWHTNTLERHVAVLT
ETIRKGIHDADSEARSIARKCYWGFHGHYSREAEHLFQALESTYQKALQSYLKSSDSVVS
LPQSDRSSSSSQESLNRPLSVKSVIGGSITRTPGKLVGSRVSTTPGSLQRSRSDIDVNAA
SSAKSRLSTVPASSPFSSASTLPPGSYASLGRVRTRRQSSGSVGGASSSIVDSRGRSRAK
VVSQSQRSRSANPNSAGSRSSSPGKLLGQSAYGRIPRATASASSTPADKRSRIPRSQGCS
RETSPSRMGLARSRIPRPSMSQGCSRDTSRESSRDTSPARGFAPLDRYGLIHQARISASV
NAMRVLNTGTEVEAAVADALRKPLRRRYESPGMYSDDDANSDASSACSERSYSSRNGGIP
HYLRQTEDVAEVLNHCASSNWSERKEGLLGLQNLLKSQRILSRVELKRLCEIFTRMFADP
HSKRVFSMFLETLVDFITVHREDLQDWLFVLLTQLLKKMGADLLGSVQAKVQKALDITRE
SFPFDQQFNILMRFIVDQTQTPNLKVKVAILKYIETLARQMDPADFVNSSETRLAVSRII
TWTTEPKSSDVRKAAQVVLISLFELNTPEFTMLLGALPKTFQDGATKLLHNHLKNSSNTS
SNVGSPSNTIGRTPPRHTASRTSPLTSPTNCSHGGLSPSRVWGWGVNGLSKHPPAAPPPP
PPHSTPAAPSLRVLRRAFSPSMMEYDTENMNSEEIYSSLRGVTEAIQSFSYRSQEDLNDP
VRRDGKRDDEAGREGVASSPGSDARLGVDVLESGRTALDNKTSLLNTPSPRSFSGPRGRE
FSPYGYGETICSYDKSALKEAVFDDDVEQFRDFSPDHSDLVADLLKELSNHNERSEERKG
ALVELLKITREDNTAVWDEHFKTILLLLLETLCDKDHTIRALALRVLKEILRNQPARFKN
YAELTIMKTLEAHKDSHKEVVRAAEEAASTLAGSIHPEQCIKVLCPIVQTADYPINLAAI
KMQTKVIERIAKESLLQLLPDIIPGLLQGYDNTESSVRKASVFCLVAIYSVIGEELKPHL
AQLTGSKMKLLNLYIKRAQTTNSNSSSSSDVSSHS
NT seq
4428 nt
NT seq
+upstream
nt +downstream
nt
atggagcccagcatggagagctgcctgtcccaggtcctgcagaaggatgtgggccggcgg
ctgcaggtgggacaggaggtcatcgactacatcctggacagggacaagtcccacgacctg
gagcaggaccagacggcactggacaagatggtggacggcatcgccagctcctgggtcaac
tccagcaacttcaaggtggctctgctgggtttggacctcctgtcagccttagtgacgagg
ttacaggaccgcttcagggctcaggtgggaacagttctgcccagcctcatcgatcggtta
ggagacgccaaggaccaagtccgagaacaggaccagacgctgctgctgaagatcatggac
caggctgcgtctccacagtacatgtgggaccgaatgttgggaggattcaaacataaaaac
aaccgaaccagagaaggagtgtgcctttgcctcatcgccacgctgaacacatatggagct
caaggcctgacgttgagtaaaatcgttcctcacgtgtgtaacctcctgggtgatccgacg
gctcaggtgcgggacggagcgatgagctgtctggtggagatctacagacacgtgggggag
agggtgaggctggacctcagcaagaaaggccttcctcagtcacggttgaatgtaatcttc
agcaggttcgatgaagtccaaagatctgggaacatgatcttgtcctcgggctcagataag
aactttgaggatgaagactcggtggatggaggcaggtcctcctcctcctcctcctccaaa
gctccccctggtggcaggaggactgtgatgagctccgtcaggagacccagctccgcctct
tccacaaagaccacaggtaaagaagccgcagccggggccgtcgatgaagaggatttcatt
aaagccttcgaagacgtgccctcagctcagatctactcgaacagggagctggaggaccag
ctgaccaagatcagagaagttctgtctgacgataaacatgactgggagcaccgggtggtt
gctctgaaaaaggtccgctcgctcatgttggccggagctacggactacgaaggtttccct
cagcagctgcgcctcctggaggccgccttcaagctgtcggccaaagacctgcggtcccag
gtggtccgggaggcctgcatcactctgggtttcctctccagacgctgttatgagttcctg
gatctaatgctgcaggagtggcacacaaacacgctggaaagacacgtcgccgtcctgacg
gagaccatcaggaaggggatccacgacgccgactctgaggccaggtccatcgccaggaag
tgctactggggtttccacggccactacagccgggaggcggagcatctgtttcaggcgctg
gagtccacctatcagaaggctctgcagtcgtacctgaagagctcggacagcgtggtgtcc
ctgcctcagtccgaccgctcgtcttcgtcttcgcaggagagtctgaaccgaccgctgtct
gtgaagagcgtcatcggtgggagcataacccggactcctggtaaactggtgggctccagg
gtctccacgactccgggctcgctccagcgttcccgtagcgacatcgacgtgaacgccgcc
tccagcgccaagtctcgcctgtccacggttcccgcctcctcgccgttcagctctgcgtcc
accctgccgccgggatcgtacgcctcgttgggtcgtgttcgcaccagaaggcagagttca
ggcagtgtgggcggagccagctcgtcgatcgtggacagcagggggcggagccgagccaaa
gtggtctcccagtcccagcgatccagatcagccaatcccaacagtgccggcagtcgctcc
agttctccggggaagctgctgggtcagagcgcctacggtcggatcccccgagccacggcg
tcggcctccagcacgccggcggacaaacgcagcaggatccctcgcagccagggctgcagc
cgggagaccagcccgagccgaatgggcctcgcccggagccgcattccccgccccagcatg
agtcagggttgcagtcgcgacacgagtcgcgagagcagccgtgacaccagccccgctcgg
ggcttcgctcctctggatcgttacggtttgatccaccaggcgaggatttctgcgtcggtg
aacgccatgagggtcctgaacaccggcaccgaggtggaggcagccgtggccgacgctctg
aggaagccgttgaggcggcgctacgagtctcccgggatgtactcggacgacgacgctaac
agcgacgcctccagcgcctgctcggagcgctcgtacagctcgcggaacggcggcatcccg
cactacctgcggcagacggaggacgtggccgaggtcctgaaccactgcgccagctccaac
tggtccgagaggaaggagggcctgctgggtctccagaacctcctgaagagccagaggatc
ctgagccgagtggagctgaagagactctgtgagatcttcacacggatgtttgcagatcca
cacagtaagagagtgttcagcatgttcctggagactctggtggacttcatcacggtccac
agggaggacctgcaggactggctgtttgtcctgctcacacagctgctgaagaaaatggga
gcggatctcctgggctcagtccaggccaaagtccagaaggccctggacatcaccagggag
tcgtttccgtttgaccagcagttcaacattctgatgaggttcatcgtggaccagacccag
accccaaacctgaaggtgaaggtggccattctgaagtacatcgagactctggcccggcag
atggatccggcggacttcgtcaactccagcgagacccggctggcagtgtcgcggatcatc
acttggaccaccgagcccaaaagttctgacgtcaggaaggcggcccaggtggttctgatc
tcgctgttcgagctgaacacgccggagttcaccatgctgctgggagcgctccccaaaacc
ttccaggacggagccaccaagctgctccacaaccacctgaagaactccagcaacaccagc
agcaacgtgggatctccgagcaacaccatcggccggacgccgccgcgccacacggccagc
aggacgagccccctgacctcgcccaccaactgctcccacggcgggctttccccaagtcgg
gtttggggttggggggtcaacgggctgtcaaagcacccccccgccgctcctccaccccct
ccgcctcactccacccctgctgccccctccctcagggtcctgcgcagagcgttttcaccc
agcatgatggagtacgacaccgagaacatgaactcggaggagatctacagctcgctccga
ggcgtcaccgaggccatccagagcttcagctaccggagccaggaggacctgaacgacccg
gtccggcgggacgggaagagggacgatgaagcaggacgagaaggcgtcgcatcgtctccc
ggttctgacgcccgtctgggtgtggacgtgttggaaagcggccgcacggcgttggacaac
aagacctccctgctgaacacgccgtcgccgcgctccttctccggcccgcgcggccgggag
ttttcgccgtacggatacggagagaccatctgcagctacgacaagagcgccctgaaggag
gccgtgttcgacgacgacgtggagcagttcagagacttcagtccggaccactcggacctg
gtggccgacctgctgaaggagctgtccaatcacaacgagcgctccgaggagcgtaaaggc
gccctggtggagctgctgaagatcacgcgagaggacaacacggcggtgtgggacgagcac
ttcaaaaccatcctcctcctcctcctggagacgctgtgtgacaaagaccacaccatccga
gctctggctctacgcgtgttgaaggagatcctgaggaaccagccggcccggttcaaaaac
tacgccgagctgaccatcatgaagaccctggaggctcacaaagactctcacaaggaggtg
gtgcgagcggccgaggaggcggcgtccacgctggccggatccatccacccggagcagtgc
atcaaggttctgtgtcccatcgtccaaacggccgactaccccatcaacctggctgccatc
aagatgcaaactaaggtcattgaacgcatcgccaaggagtctttactgcagctgctgccg
gacatcatcccaggactgctgcagggctatgacaacacggagagcagcgttcgcaaggcc
agcgtgttctgtttggtggccatctactctgtcattggagaggagctcaaaccccacctg
gcacagctcacgggcagcaagatgaagctgctgaacctttacatcaaacgagcccaaacc
accaacagcaacagcagcagctcctcagacgtgtcctcccacagttaa
DBGET
integrated database retrieval system
