Kryptolebias marmoratus (mangrove rivulus): 108249777
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Entry
108249777 CDS
T05608
Symbol
ptchd4
Name
(RefSeq) patched domain-containing protein 1
KO
K24682
patched domain-containing protein
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
kmr04990
]
108249777 (ptchd4)
Domain-containing proteins not elsewhere classified [BR:
kmr04990
]
Other domain-containing proteins
Patched domain-containing proteins
108249777 (ptchd4)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Patched
Sterol-sensing
Motif
Other DBs
NCBI-GeneID:
108249777
NCBI-ProteinID:
XP_017294858
UniProt:
A0A3Q2ZX71
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All DBs
Position
LG19:complement(21537107..21604365)
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AA seq
925 aa
AA seq
DB search
MCFIGGDGASASRILWRMLRQVIHRGLKASFYWLGLFVSRHPVFFLTVPAVLTIIFGSTV
LSRFKPERDLEVLVAPTHSLAKIERSLANSLFPIDQSKHKLYSDLHTPGRYGRLILLARS
GGNILELADQVLQVHKQVLDLRVNYKGFNYTFAHLCVLSHRDMRCLLDDIITIFEDIRQA
VLSNSTFHKVPLSYPNTTLKNGRVSFIGHQLGGVSFSPNSRDQQVKFARAVQITYYLRDH
GPVVQDAIAERWENEFCALVNRLSTAEAPHATDQLHIHSLTSFSLWRDFHQTGILAKGEV
LVSLVLVLLAATISSSMRDCLRGKPFLGLLGVLTICIANVTAAGIFFISDGKFNSTLLGI
PFFAMGHGTKGVFELLAGWRRTRENLPFKERVADAFADVMVCYTMTSSLYIITFGMGASP
FTNIESVKIFCQSMCVAILVNYFYVFSFYGSCLVFAGQLEQNRYHSVFCCKIPSVEYLDR
QPTWFKTMMSDGHDLSTHHDSVPYQNHFIQHFLREHYTEWITNTYVKPFVVILYLIYASF
SFMGCLQISDGSNIVNLLASNSPSVSYALTQQKYFSNYSPVIGFYIYEPIEYWNSTVQEH
LKTLSHGFNKISWMDNFFHYLRVVNVSASTKSDFINILKGSFLRSLEYQHFTEDIIFSKN
RETDEYDIIASRMYLVARTTEKKREEVVELLEKLRPLMLINSIKFIAFNPTFVFMDRYSS
SVISPILTSGFSVLTILILTFFLVINPLGNFWLILTVTSVELGVLGLMTLWNVGMDSISI
LCLIYTLNFAMDHCAPHLYTFVLATEHTRTQCIKLALEEHGAAILQNTSCFVIGIMPLVF
VPSNLTYTLFKCSLLTAGCTLLHCFVILPVFLTFFPPSKKRHKKKKRAKRKERERERERE
REREREREEIECIEIRENPDHVTNV
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atgtgcttcatcggaggagacggggcatctgcgagccggattctgtggaggatgctgcgg
caagtgattcacagagggctcaaggcttccttctactggctgggcttattcgtcagcagg
caccccgtcttcttcctcaccgtccccgccgtgctcaccatcatcttcggctccacggtg
ctgagccgattcaagccggagcgggacctggaggtgctggtggcgccgacccacagcctt
gccaagatcgagcgcagcctcgccaacagcctgttccccatcgaccagtccaagcacaag
ctgtactcggatctgcacacgccgggcaggtacggcaggctcatcctgctggccaggtcc
gggggcaacatcctggagctggccgaccaggtcttgcaggtccacaagcaggtgctggac
ctgcgcgtcaactacaaggggttcaactacacattcgcgcacctgtgcgtgctgagccac
cgggacatgcgctgcctgctggatgatatcatcaccatcttcgaggacattcggcaggct
gtgctgtccaacagcaccttccacaaggtgcccctcagctaccccaacaccaccctgaag
aatggacgagtgtccttcatcggacaccaactgggcggtgtgtccttctcgcccaacagc
cgcgaccagcaggttaagtttgcccgcgcggtccagatcacctactacctccgtgaccac
ggacctgtggtgcaggatgccatcgcagagcgctgggagaatgagttctgcgctctggtg
aacaggttatccacggccgaggcgccacatgctactgaccagctccacatccattctctt
acctccttcagcctgtggcgggacttccaccagaccgggatactggccaaaggggaagtc
ctggtcagcctggttctggtgcttctggctgccaccatttccagctctatgcgtgactgc
ctgaggggaaagcctttccttggcctcctgggggtgctgaccatttgcatcgccaacgtg
acggctgcagggatcttcttcatatcggatgggaagttcaactccaccctactggggatc
ccgttctttgccatgggtcatggaaccaaaggtgtctttgaactgctggcaggctggagg
agaacaagagaaaacctccccttcaaggagcgtgtggctgatgcgtttgcagatgtaatg
gtgtgctacactatgaccagttcactctacatcatcacctttggcatgggagctagccct
ttcactaacattgagtcagtgaaaatcttctgccagagcatgtgtgtggccatcctggtg
aattatttctatgtattctctttctatggctcctgcctggtatttgcaggacagcttgag
cagaaccgctaccacagtgtcttctgttgtaagatcccctcagtggagtacttagaccgc
cagccgacatggtttaaaaccatgatgagtgatggccatgacctgtccacacatcatgac
agtgtaccgtaccagaatcacttcatccagcacttcctacgagagcattacacggagtgg
attaccaacacctatgtgaaaccatttgtggttattctatatctcatctatgcctcattt
tcgttcatgggatgtttacaaatcagcgatggatcaaacatagtgaaccttttggccagt
aactcaccgagtgtttcctatgctctgacccaacagaaatatttcagtaattatagtcct
gtgattgggttttacatttatgaacccattgagtactggaactccacggtgcaggagcac
ctgaagactctgagtcacggcttcaacaagatctcctggatggataactttttccactac
ctgcgggtggtaaatgtgagtgcatcaacaaagagtgacttcatcaatattttaaagggt
tctttcctgcgcagcctggagtaccaacatttcacagaggatattatcttttccaagaac
cgcgagactgacgaatatgacataattgcctcacggatgtacttggtagcacggaccaca
gagaagaagcgtgaggaagtggtggagcttttggaaaagctccgccccttgatgctaatc
aacagcatcaaattcattgccttcaatcccacatttgtttttatggaccgctatagctcg
tctgtcatctcacccatcctgacctcaggtttcagtgtactcaccatcctcatcctcact
ttcttcctggtcatcaatcctttggggaacttctggctcattctcacagtgacatctgtg
gagctgggtgtcttaggtttgatgaccctctggaatgtcggcatggacagcatttccatc
ctgtgccttatttacactctcaattttgccatggatcactgtgcaccacacttgtacact
tttgtgcttgccacagagcacacaaggacacagtgcatcaagttggcactggaggagcac
ggggcagccatcttacagaacacatcctgctttgtgatcgggatcatgcctctagtgttt
gtgccttccaatttgacctacacactgttcaagtgctcccttctcactgcaggctgcact
ttgctgcactgcttcgtcatcctgcctgtcttcctgaccttcttcccgccatccaaaaag
agacataagaaaaaaaaaagagccaagcggaaagagcgggagagggaaagggagcgagag
agggagagggaaagagaaagggaggagatagagtgcattgaaatcagggagaatcctgat
catgtgacaaatgtttga
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