Kryptolebias marmoratus (mangrove rivulus): 108249876
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Entry
108249876 CDS
T05608
Symbol
cdhr5b
Name
(RefSeq) cadherin-related family member 5 isoform X1
KO
K16505
cadherin-related family member 5
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
kmr04515
]
108249876 (cdhr5b)
Cell adhesion molecules [BR:
kmr04515
]
Cadherins
Cadherin related
108249876 (cdhr5b)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Syndecan
Motif
Other DBs
NCBI-GeneID:
108249876
NCBI-ProteinID:
XP_017295002
UniProt:
A0A3Q3A9Z3
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Position
LG17:complement(768541..784083)
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AA seq
733 aa
AA seq
DB search
MDRIYPSFLCLLLLQTSVLANNLCTFSPSVQFAENNKVGAVVATITTQAGVQLNLSSENS
DDLPFGLEGNHLIATVELDFETMDSMFEVKFLCTLGDRKVDYEILIILENINDNHPKFDQ
KLYPASINEMSPVGATVGRFAATDADRDVLYYRLTTESSYFKLKLPTNPEILVNAHLDYE
RIREVELVLEAQDTTFGSSSGEASFTATSTILVSILDVDNRPPWYQPCRKHEVGGAVVCE
NAGYTGRVDLNEQETGVLTLKPGPLYAIDGDSGINEAITYSFLTGNGTDLFEINPNTGNI
TMKKPADVLGPISLTVLAAQRTNAYQLATTTLTISVQVKSLHVPQFQRPLYEALITSKGS
MAVDLKSSQALQILATDEDYSSTGGLNPHITYSVEDSSVFSIIGGYLFLTEDASDGTLSL
KVLAKDTSNDETATAQLRVELKLSSSTTTLPLSTTDIMTTSVGESTTNIKTTVITTNPCM
STGISTTSHSVTKISSGGFGGSDMAALGATLGVLLFVSLVVIGLLVYRMQKGKADWKKIQ
EVTMFRSSLGQNSGGQKEGIQYTNEAFQRDDDRGSMGSGGPDEADTGRFPPNTDWNNPFK
EVQQRSSAPLPSLQSDGISDNGSDKTDDEKDVKPILTKERRVEEGYKSVWFKEDIDPNAK
EEVVIIPDSREEGSKYEDNEPSSSSKVRNEDDSFQKKAPKVAFADTDLDSGLGVKMEDPE
EDSASDHNLNIDL
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atggacaggatttatccatctttcctctgcttgcttctgcttcagacgtccgtcttggca
aataacttatgtactttttctccaagtgtacaatttgctgaaaacaacaaagtgggtgct
gttgtagcaacaatcaccacccaggctggagtgcagctgaatctttcctctgaaaactct
gatgacctcccttttgggctagaaggaaaccacctgatagctacagtagagttggacttt
gagacgatggattctatgtttgaagtcaaattcctatgcacactgggcgaccgaaaagtt
gactacgaaattttaataattctcgagaatataaatgataaccacccaaagtttgaccag
aagttgtatcctgccagtatcaatgagatgtcccccgttggcgcaactgtgggtcgtttt
gctgccacagacgcagaccgagatgtgctctactacaggctgacaactgaatctagttat
tttaagctgaagttacctactaacccagaaatccttgttaatgcacatcttgactatgaa
agaatcagagaggttgaactggtacttgaagctcaagacacaacattcggttcatcctct
ggagaagcatcatttactgccacctcaaccatactggtttccatcttagatgttgataac
agacctccatggtatcagccttgcagaaaacatgaagtgggtggagctgtggtctgcgag
aatgctggctacaccggcagagttgatttaaatgaacaagagacaggggtgttaactttg
aaaccaggaccgctctatgccattgacggagactctggaataaatgaggccataacatat
tccttcctaactggaaatggaactgatctgtttgagatcaacccaaacacaggaaacatc
acaatgaagaagccagctgacgtattggggccaatcagtctaacagtcctggctgctcag
aggacaaatgcttatcagttagctacaaccactctcacaatcagtgtgcaggtgaagagc
ttgcatgtaccacagttccagaggcctctgtacgaagctctcatcacttcaaagggctca
atggcagttgacttaaagagcagtcaggcattacagatcctggccacagatgaagactac
tcttctactgggggtttaaatccccacattacttactcagtcgaagacagcagtgttttt
tccatcattggtggctacttgttcctgactgaagatgcctcagatggcacattatccctg
aaagttttggcgaaagacacatccaatgacgagacagctacagcccaactcagggtagag
ttgaagctgagttcttccaccaccactttgcccctgagcactacagatattatgaccacg
tcagtaggagaatctaccaccaacatcaagacaactgtgatcacaaccaacccctgtatg
tcaactggaatctcaaccaccagccacagtgtaacaaagatctcatcaggtggatttgga
ggatcagacatggcagcactcggcgcaaccttgggtgttctgttgtttgtttctcttgtg
gtcattgggctgcttgtttatcgcatgcagaaagggaaagcagactggaagaagatccaa
gaagtgactatgtttcgaagttctctgggtcaaaattcaggaggtcagaaggagggaatt
cagtacaccaatgaggctttccagagagatgacgatagaggcagcatgggctcaggtggt
ccagatgaggcagatactggcagattcccaccaaatacagactggaacaacccttttaaa
gaggtgcagcagaggtcttcagcaccactgccctccctacagtctgacggcatcagtgac
aacggctcggataagactgatgacgagaaagatgtgaaacccatcctgaccaaggaaagg
cgggttgaggagggatacaagtccgtctggtttaaggaggacatcgatcccaatgccaag
gaggaggtggttatcatcccagatagcagagaagaaggaagcaagtatgaggacaacgaa
ccatcatcaagcagcaaagttagaaacgaagatgacagtttccagaagaaagctccaaag
gttgcctttgctgacacagatctggacagtggtctcggggtgaagatggaagatcctgaa
gaggattcagcaagtgaccataatttgaacattgatctgtaa
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