Kryptolebias marmoratus (mangrove rivulus): 108249931
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Entry
108249931 CDS
T05608
Symbol
depdc5
Name
(RefSeq) GATOR complex protein DEPDC5 isoform X3
KO
K20404
SEA/GATOR complex protein SEA1/DEPDC5
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
108249931 (depdc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
kmr04131
]
108249931 (depdc5)
Membrane trafficking [BR:
kmr04131
]
Autophagy
Other autophagy associated proteins
SEACIT/GATOR1 complex
108249931 (depdc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEPDC5_CTD
IML1
IML1_N
DEP
Motif
Other DBs
NCBI-GeneID:
108249931
NCBI-ProteinID:
XP_017295083
LinkDB
All DBs
Position
LG20:complement(24901987..24979798)
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AA seq
1620 aa
AA seq
DB search
MKTNKSYKLVLHKKGFGGSDDELVVNAKVFPQVNLGDIIEIAHPTDEYSPLLLQVKSLKD
DLQKETISVDQTVAQAFKLRAYQDVIVNTVDPKEVTLDLVELTFKDQYIGRGDMWRLKKS
LVSTCAYVTQKVEFAGIRAQASELWVKGEKVTCGYISEDTRVVFRSTSAMVYIFIQMSCE
MWDFDIYGDLYFEKAVNGFLSDLFAKWKEKNCSHEVTVVLFSRTFYNAKTLEEFPEILRG
SIRQNHEGRFYEDFYRVVAQNERRDEWTPLLVTIKKLFIQYPVLVRLKEADGFPVGSNST
AVQGNYLEAINLSFNVFDKHYINRNFDRTGQMSVVITPGVGVFEVDRLLMILTKQRMIDN
GIGVDLVCMGEQPLHAVPLFKLHNRMTPGDFSVGDDYNLPHWINHSFYTSKSQNSCSSFT
PRIKLAGRKLHAEKYKSCKDHTLCAPKDSDNSLPIQVDYNAYDTQVFRLPGPSRIHRSTN
FRICRDRETSGRKSWGSVDVSAGTSTSPPVRSEEQRSLASDDSLGPVSNMLLIPRLPQPQ
YEVSSSLGYTSSRELLEKMIDSQRDSSAPGRFTVGSAESTLHIRPGGYTPQRALINPFTP
SRMPMKLTSNRRRWMHTFPVGPSGEAIQIHHQTRQNMAELQGNQQRDPTHTSAELLELAY
HEATGRQTTSRQGGENGLYTCVGTEFTGSPGSNNSSGPLTSNSSSFQEFSNGADPKNDPN
CWNNYARGMCGAVKLPEKYTRNKKQDVELVHRAYMPALLLSAPPTVPSFCCTVGVDWKSL
TTPACLPLTTDYFPDRQTLQNDYTEGCYDLLPHGDLERRDDEAPVMTASQVFEEFICQRL
MQGYQIIVQSNNRKPPPAVATPLGSSPQYTRGLVSLRRTDEEEIVYWLSMGRTFHKVCLR
DKIITVTRYLPKYPYESTLIQYSYNLCPSHSDAQFVSCWVEFGHERLEEYKWNYLDQYIC
SAGSEDFSLIDSLKFWRTRFLLLPAGGARRMADGEGHWDVYREGAGVGTGDWVLLDGFIR
FLEGLNRIRRRHRSDRIIRKGTSLKGLQVTSPLPPYPTEPVVPPQGKRGTSALSALLEME
QNQKTLEEQQPQQAKPSAAVSDLSGVTTAPTCVDSPRKDAAFILDLIRSPRSSYIYHFQL
PAETTEAAERTQFGVLAGAPTNPSGDAVTSSTDTSGQSTAGALCLSSSSTLLEILEAIKH
STDGVQLLPEQKGLPLNCFISAEVVHWLVINVEGVATQGIAVDIMQKMLDEGLVAHASGE
AMRTFVYGFYFYRIVAEKDGLTPQLQTTAAGGWSTAALEDFALFQRKWFEVAFVLEEQRP
CDLPAFLLPWLPSRPASYASRHSSFSRSFGGRSQAAALLAATVPEQKTVTLDVDVNNRSD
RTEWCSCYYHGNFSPNAAFEIKLHWMAVTAAVLFEMVQGWHRKAASCGFLLVPVLEFPFA
LTSHLYGDPLRAQLFIPLNIQCVLKNGSDNLFEGFEPETYWDRMQLFQEAILYRFGFVHD
KFSSSTFNFPAENKPQYIHVTGTVFLQLPYSKRKYSSGQTRRRRNSTTSNSQGPFGGEER
VGYYWAYNTMLTKAWRTGVLGDERLADRLLKDFTDFCSNRDNRLVTFWDSCQEKMHASAP
NT seq
4863 nt
NT seq
+upstream
nt +downstream
nt
atgaagacaaataagtcatacaagcttgttctccacaaaaaagggtttggtggaagcgat
gatgagttagttgtcaacgctaaagttttccctcaggtaaacttgggtgatataattgaa
atcgcacaccctacagatgaatacagtcctctcctgctgcaagtgaaaagtttaaaagac
gatcttcagaaagagacaatcagtgtggaccagactgttgctcaagcttttaagcttcgt
gcataccaagatgtaattgttaacacagttgacccaaaggaagtaaccctagaccttgtg
gagctgacttttaaagatcagtacattggcagaggagacatgtggaggctaaagaagagt
ctggtgagcacatgtgcttatgtgacccagaaggtggaatttgctggaatcagagctcag
gccagtgaactatgggtgaaaggagagaaagtgacatgtggctacatcagtgaagatacc
agagtggtgttcagatcaacatctgcaatggtgtacatcttcatccagatgagttgtgaa
atgtgggactttgatatatatggtgatctctactttgagaaggctgtaaatggtttcctg
tctgacctctttgccaaatggaaggagaagaactgcagccatgaggtgacagttgtgctt
ttttcacgcacattctacaatgctaaaacattagaggaatttccagagattctgagaggg
tccatcagacagaatcatgagggacgcttctatgaagacttctacagggttgtggctcag
aatgagagacgggatgagtggacaccattgctggtcaccattaagaagctctttatccag
tacccggtcctggtgcggctaaaagaagctgatggttttcctgtgggttctaactccact
gctgtccaaggaaactacctggaggccattaacctttcttttaatgtttttgacaagcac
tacatcaaccgaaactttgaccgcaccggccagatgtcagtggtcatcacacctggcgta
ggcgtatttgaagtcgaccgcctgcttatgattctcaccaagcagcgtatgattgacaac
gggattggtgtggatttggtgtgcatgggagagcagccattgcacgcggtaccgttattc
aagctgcataacaggatgactccgggagatttcagtgtgggagacgactacaaccttcca
cactggatcaaccatagcttctacacctcaaagagtcagaattcttgcagctctttcact
ccacggatcaaactggctggacgtaagcttcatgctgaaaaatacaaaagctgcaaagat
cacactctttgtgcaccaaaggactcagacaacagtctgcccatacaagtggactacaat
gcctatgacactcaagtgtttcgacttccaggtccttcacgaattcatagaagcactaac
ttcagaatttgtagagaccgagaaacaagtgggagaaagagctggggatcagtggatgtt
agcgcaggcaccagtacgtctcctcctgttcgctccgaggaacaacgaagcctggcctcc
gatgacagtctgggccctgtgtccaacatgctgctgattccccggcttcctcagcctcag
tatgaagtcagcagctctttgggctacaccagcagcagagagttattggagaagatgatt
gactctcagcgggactccagtgccccaggcaggttcactgtgggcagtgctgagtccacc
ctgcacatccgtccaggaggctacaccccacagagagctcttattaaccccttcacacca
tccaggatgcccatgaaactcacttccaaccgccggcggtggatgcacacctttcctgtt
ggtccttctggagaagcaatccagatccatcaccagacccgacagaacatggcagagctt
caggggaaccaacagagagatccaacacacacgtctgcagagttgctggagctggcttat
catgaagccactggaaggcaaacaacttctagacaaggtggtgaaaatggcctctacaca
tgtgtaggaacagagttcactggaagccctgggagcaacaacagcagtggacctcttacc
agcaacagctcttcatttcaagagttttccaacggtgcagatccaaaaaatgacccaaac
tgttggaacaactatgccaggggtatgtgtggtgctgtaaagctgccagaaaaatacact
agaaacaagaaacaagatgtggagctcgtgcatagagcttacatgccggccctgctactg
tctgcacccccaacagtgcccagcttttgctgcacagtgggggtggactggaagtccctg
accacaccagcctgcctccccctcaccaccgactactttcccgaccgacagactctgcag
aacgactacactgaaggctgctatgacctgctgccacatggcgacttggaaaggcgagac
gatgaagctccagtgatgactgcctcacaagtgtttgaagagtttatctgccagaggttg
atgcagggatatcagattatagtccaatcaaataacaggaaaccaccccctgctgtggcc
acaccccttggcagtagtcctcaatacaccagaggtctggtctcgctccggcgaacagat
gaggaggagattgtttactggctcagcatgggccggaccttccataaagtctgtctcaga
gacaagatcatcactgttactcgctacttaccaaagtatccatatgagtccactctgatc
cagtacagctacaatctgtgtccttcacactctgatgctcaatttgtttcgtgctgggtg
gagtttggacacgagagattggaggaatataagtggaactacctggaccagtatatctgc
tctgcaggctcagaggacttcagtctgattgactcgctgaaattctggaggacgcggttc
ttgttgctgccagctggtggggctcggcggatggcagatggggaggggcactgggacgtg
taccgtgagggtgctggtgttggaacgggagactgggttttgttggatggcttcattcgc
ttcctggagggccttaatcgcattcgacgacgtcatcgctccgatagaatcatcaggaag
ggcacatcattaaaaggactgcaagttaccagtcctctccctccatacccaacagagcct
gtagtgccaccacaaggaaagagaggcacatcagctttgtcagctctgctagaaatggag
cagaaccagaagacactggaggaacagcagccgcaacaagccaagccttcagcagctgta
agtgacctgtcaggtgttactacagctcccacatgtgtagacagtccgcgcaaggatgct
gcctttattttggatttaattcgtagccctcgctcctcctacatctatcactttcagctg
cctgctgaaaccactgaagctgcagagagaacacaatttggagtgctggctggcgcacca
acaaatccttcaggagacgctgtaaccagtagcactgacaccagtgggcagtccacagca
ggggccctctgtctgtcctcctcttcaacacttttagagatccttgaggccatcaaacat
tccacggatggtgtacagctgctcccggagcagaagggtctaccactgaactgctttatc
agtgcagaagtggttcattggctggttatcaatgtggagggtgtggctacacaaggaata
gctgtggatatcatgcagaaaatgctagatgaaggtttggtggctcacgcttcaggagag
gccatgcgcacttttgtctacggcttctacttctacagaatagtagcagaaaaagatggc
ctcacccctcagcttcagactacagctgctgggggttggtcgactgcagcactggaggat
tttgccctgttccagaggaagtggttcgaggtggcttttgtgctggaggagcagcgtccc
tgtgacctcccagcattcctcctgccctggctgcccagccggcctgcctcctatgcaagt
aggcacagctccttcagccgcagctttgggggacgcagccaggctgctgcactgctagct
gctacagtcccagagcagaagaccgttacactggatgtggatgtcaataaccgcagtgac
cgaaccgaatggtgcagctgttattatcatggcaacttctctcctaatgctgcttttgag
atcaagctgcactggatggctgtcactgctgcagtgcttttcgagatggtccaagggtgg
cacagaaaagcagcctcttgtggcttcctgttggttcctgttctggagttcccttttgct
ctaacatctcatttgtatggagacccactgagagcccagctcttcatccccctcaacatc
cagtgtgtgctgaagaacggcagtgacaacctatttgaagggtttgaaccagagacgtat
tgggataggatgcaactctttcaagaggctattctctacaggtttgggtttgtacatgat
aagttttcttcatcaacttttaatttccctgcagagaacaagcctcagtacatccatgtt
acaggcacggtgttcctgcagctgccatattccaagaggaagtattccagtggtcagacc
cggagacgaagaaactccaccacctccaacagccaggggccatttggtggtgaggagagg
gtgggctattattgggcctacaacaccatgctgactaaagcatggaggaccggtgtgctg
ggtgatgagaggctggctgaccgcctgctcaaagacttcacagacttctgctcaaaccgg
gacaacagacttgtgactttctgggacagctgccaggagaaaatgcatgccagtgccccc
tga
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