Kryptolebias marmoratus (mangrove rivulus): 108249966
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Entry
108249966 CDS
T05608
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 12-like isoform X1
KO
K22614
NLR family CARD domain-containing protein 3
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
kmr04054
]
108249966
Pattern recognition receptors [BR:
kmr04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
108249966
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FISNA
NLRC4_HD2
NACHT
LRR_6
NOD2_WH
LRR_4
PRY
SPRY
AFG1_ATPase
LRR_8
Vac_Fusion
Motif
Other DBs
NCBI-GeneID:
108249966
NCBI-ProteinID:
XP_037829734
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All DBs
Position
LG23:14081384..14499314
Genome browser
AA seq
1365 aa
AA seq
DB search
MDQCEDREEGVPPSKTTLCGEHESQSKNQRKNPEPEPSCVSFNSDDSKDIIVHFESDQPP
AAERVDQQSSEVPRAQSAQQHQTQLDSIFMLLEDNMVTFVKNELKNIQKVLSPDYKECLG
SQREDEELLEGENEDQRRSSREALMKITDYFLRRMKQEELADHLQSRHVAEVCQRNLKSS
LKKKFQCVFEGIAKAGNPSLLNQIYTELYITEAGTGEVSDEHEVRQIETASRKPHRPETT
IRQEDIFKLPPGRHEPIRTVMTKGVAGIGKTVLTQKFTLDWAEDKANQDIHFTFPFTFRE
LNVLKEKKFSLVELVDLFFTETKEMCSFEKFQLVFIFDGLDECRLPLDFHNNQILTDVTE
STSVDVLLTNLIRGNLLPSARLWITTRPAAANQIPAECVSIVTEIRGFTDTQKEEYFRKR
FRDEEQASSIISHIKTSRSLHIMCHIPVFCWITATVLEDVLKTREGGELPNTLTEMYIHF
LVLQTKVKNIKYDGGAETDPHWSPESRKMIESLGKLAFEQLQKGNLIFYESDLTECGIDS
KEASVYSGVFTQIFKEERGLYQDKVFCFVHLSVQEFLAALYVHLTLINSGVNLIEKQQTV
YLWFKLFQNVTLNDLHQSAVDKALQSPNGHLDLFLRFLLGLSLQTNQTLLRGLLTQTGSS
SQTNQGTVQFIKKKISENLSAEKSINLFHCLNELNDGSLVEEIQQSLSSGSLSTDKLSPA
QWSALVFFLLSSEKDLDVFELKKYSASEEVLQRLLPVVKASSKVLLTNCTLSQETCEALS
SVLSSQSSSVRELDLRIHDSRVKSLFNGLLSPNCKLETLRLSYCNLSERSCEVLSSVLSS
QSSVLTELDLSNNNLQDSGIQKLSVGLKSPHCHLETLRLSVWNLSKQSCEVLSSVLSSQS
SSLKELDLSNTNLTNSRIHLLSVGLKSPHCQLETLRLSYCNLSERSCEVLSSVLSSQSSR
LKELDLSNNNLQESEVKLLSAALRSLHCHLETLRLNCCNLSKKSCEVLSSVLSSQSSGLK
ELGLSNNNLQDLGIQLLSVGLKSPLCHLETLRLSCCNLSERSCEVLSSVLSSQSSSLKEL
DLSNNNLRDAGVKLLSAALRSPHCHLETLRLSGCLITEEGCASLASALSSNPSHLRELDL
SYNHPGDSGVKLLSAGLKDPLWRLDILRVEPAGVQWLTPGLRKYSCQLTLDKNTVSRNLK
LSDSNRKVTHVEEEQSYPNHPDRFEGYCPQLMCEDALTGRCFWEVEWQGEVDISVTYRRI
KRSGDRADSEFGRNLESWSLSCSGRGHYTAWHNEKGISIFSSSSASDRVAVYVDYPAGIL
SFYKVISDSLIHLYSFNNTFTEPLYPGFSFGFWNRTGSTVWLVSV
NT seq
4098 nt
NT seq
+upstream
nt +downstream
nt
atggatcagtgtgaggacagagaggagggagtccctccctctaaaaccactctgtgtggg
gaacatgagagccagagcaaaaatcagaggaagaatcctgaaccagaacccagctgtgtg
tcctttaacagtgatgattcaaaggatataattgttcactttgaatcagaccaacctcca
gcagcagaaagagtggaccagcagagctcagaggttcccagagctcagtctgctcagcag
catcaaacacagctggactccatatttatgctgctggaggacaacatggtcacttttgtg
aagaacgagctgaagaatatccagaaggttctgagtccagattataaagaatgcttaggg
agtcagagggaggatgaagagttgttggagggtgagaatgaggatcagaggaggagcagc
agagaggcattgatgaagatcacagattacttcctgaggagaatgaagcaggaggagctg
gctgaccatctgcagagcagacatgttgctgaagtttgtcaacgtaatcttaaatcttct
ctgaagaagaagttccagtgtgtgtttgaggggattgctaaagcaggaaacccatccctt
ctgaatcagatctacacagagctctacatcacagaggcagggactggagaggtcagtgat
gaacatgaggtcagacagattgaaacagcatccaggaaaccacacagaccagaaacaaca
atcagacaagaagacatctttaaactcccacctggaagacatgaaccaatcagaacagtg
atgacaaagggagtggctggcattgggaaaacagtcttaactcagaagttcactctggac
tgggctgaagacaaagccaaccaggacatccacttcacatttccattcactttcagagag
ctgaatgtgctgaaagagaaaaagttcagcttggtggaacttgttgatcttttctttact
gaaaccaaagaaatgtgcagctttgaaaagttccagcttgtgttcatctttgatggtctg
gatgagtgtcgacttcctctggacttccacaacaatcagatcctgactgatgttacagag
tccacctcagtggatgtgctgctgacaaacctcatcagggggaacctgcttccctctgct
cgtctctggataaccacacgacctgcagcagccaatcagatccctgctgagtgtgttagc
attgtgacagagatcagagggttcactgacacacagaaggaggagtacttcaggaagaga
ttcagagatgaagagcaggccagcagtatcatctcccacatcaagacatcacgaagcctc
cacatcatgtgccacatcccagtcttctgttggatcactgctacagttctggaggatgtg
ttgaaaaccagagagggaggagagctgcccaacaccctgactgagatgtacatccacttc
ctggtacttcagaccaaagtcaaaaacatcaagtatgatggaggagctgagacagatcca
cactggagtccagagagcaggaagatgattgagtctctgggaaaactggcttttgagcag
ctgcaaaaaggaaacctgatcttctatgaatcagacctgacagagtgtggcatcgacagc
aaagaagcctcagtgtactcaggagtgttcacacagatctttaaagaggagagagggctt
taccaggacaaggtgttctgcttcgtccatctgagtgttcaggagtttctggcagctctt
tatgtccatctgaccttaatcaattctggggtcaacctgatagaaaaacaacaaacagtt
tatctgtggttcaaattgtttcaaaatgtgactcttaatgatctccatcagagcgctgtg
gacaaggccttacagagtccaaatggacacctggacttgttcctccgattcctcctgggt
ctttcactgcagaccaatcagactctcctacgaggcctgctgacacagacaggaagtagc
tcacagaccaatcagggaacagtccagttcatcaagaagaagatcagtgagaatctgtct
gcagagaaaagtatcaacctgttccactgtctgaatgaattgaatgatggttctctagtg
gaggagatccaacagtctctgagttcaggaagtctctccacagataaactgtctcctgct
cagtggtcagctctggtctttttcctactgtcatcagaaaaagatctggatgtgtttgaa
ttgaagaaatattctgcttcagaggaggttcttcagaggttgttgccagtggtcaaagcc
tccagcaaagttctcctgaccaactgtaccctcagccaggaaacctgtgaagctctctcc
tcagttcttagctctcagtcctccagcgtgagagaactggacctgagaatccatgattca
agagtgaagtctttgttcaatggactgctgagtccaaactgtaaactagaaacacttaga
ctgagttactgtaacctgtcagaaagaagttgtgaagtgctgtcctccgttctcagctcc
cagtcttctgtgctcacagaactggacctgagtaacaacaacctgcaggactcaggaatc
cagaaactttctgttggattgaaaagtccacactgtcacctggaaactctcagactgagt
gtgtggaacctctcaaaacaaagctgtgaagttctttcctcagtcctcagctcccagtcc
tccagtctcaaagaactggacctaagtaacaccaacctgacaaattcaagaatccatctg
ctgtctgttggactgaagagtccacactgtcaactggaaactctcagactgagttactgt
aacctatcagagagaagctgtgaagttctgtcctcggttctcagctctcagtccagcaga
ctcaaagaactggacctaagtaacaacaatctacaagaatcagaagtaaagctgctttct
gctgctctgaggagtctacactgtcacttggaaactctcagactgaattgctgcaaccta
tcaaagaaaagctgtgaagttctgtcctcagtcctcagctcccagtcctccggtctcaaa
gaactgggcctgagtaacaacaacctgcaggatttgggaatccagctgctgtctgttggg
ctgaagagtccactctgtcatttggaaactctcagactgagttgctgtaacctgtcagag
agaagctgtgaagttctgtcctcagtcctcagttcccagtcctcctctctcaaagaactg
gacctgagtaacaacaatctgcgggatgcaggagtgaagctgctttctgctgcccttagg
agtccacactgtcacctggaaactctcaggctgtcaggctgtctgatcacagaggaaggc
tgtgcctctctggcctcagctctgagctccaacccctcccatctgagagagctggacctg
agctacaatcatccaggagactcaggagtgaagctgctctcagcaggactgaaggatcca
ctctggagactggacattctcagggtggagcctgctggagtccagtggttgacaccaggt
ctgaggaagtattcctgccagctcacattagacaaaaacacagtgagcagaaacctcaaa
ctgtctgacagcaacaggaaggtgacacatgtggaggaggagcagtcatatcccaatcat
cccgacagatttgaaggctactgtcctcagctgatgtgcgaagatgccctgactggtcgc
tgtttctgggaggtcgagtggcagggcgaggttgatatatctgtcacttacagaagaatc
aagaggagcggagaccgagctgactctgagtttggaagaaacttggagtcttggagtctg
agctgctctggccgcggtcattacactgcttggcacaatgaaaagggaatttccatcttc
tcctcctcctctgcctctgacagagtagcagtgtatgtggactatcctgctggcatcctg
tctttctacaaagttatctctgactcactgatccacctctacagcttcaacaacacattc
actgaacctctttatcctggattttcatttggattctggaacagaacgggttccacagtg
tggctggtttcagtttag
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