Kryptolebias marmoratus (mangrove rivulus): 108249997
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Entry
108249997 CDS
T05608
Symbol
smg9
Name
(RefSeq) protein SMG9
KO
K18735
protein SMG9
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kmr03019
]
108249997 (smg9)
Messenger RNA biogenesis [BR:
kmr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
108249997 (smg9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg8_Smg9
ABC_tran
DUF6079_1st
AAA_30
AAA_22
AAA_7
AAA_16
AAA_28
AAA_29
AAA_5
AAA_14
URGCP_GTPase
NB-ARC
AAA_18
nSTAND_NTPase5
Motif
Other DBs
NCBI-GeneID:
108249997
NCBI-ProteinID:
XP_017295160
UniProt:
A0A3Q3ALD6
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All DBs
Position
LG16:complement(15322681..15329198)
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AA seq
506 aa
AA seq
DB search
MSESGHSQPGMYGQGRRRRRRRGERDGPPGQNLSGPSRDREYLPRERRDGSEDPPGPLIQ
KTPIILAKPPGERAKPPQNAPVSGAPVLEKPIMLMKARDDAGKPGTPPEAAAQSAGPGPS
KMEKEGQRPTQPVYQIQNRGMGPSASGSVVDPMVGQSKLLHPEKMKHSIKLVDDQMNWCD
SAMEYLRDQTDMLVVGVIGPQGTGKSTIMSLLSANTPEEDQRSYMFRAQTQEIKERGGNQ
STGIDFFITQERVIFLDTQPMLSPSILDHVINNDRKLPPEYNLPHTYVEMQSLQIAAFLF
TVCHVVIVVQDWFTDVNIYRFLQTAEMLKPSTPSASHDSAGSSGSDDGAEYYPHIVFVQN
KARREDFCPRNLKNMHLVVDKLMAHSHLKYKGTLSILDCNIFPGLGQEYLDTEVNMFLLP
VQENDEENLNKAGSGTYPLFSLLPGYRGHPTFSTMISKLRSQMLAMPRCQLSHTILTEKN
WFHYAARIWDGVKKSSALSEYSRLLS
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagtccggccacagtcagcccggtatgtacgggcagggacggagaaggagacga
cgccggggagaaagagatggacctccgggacaaaatctgtctggccctagtcgagatcgg
gaatatctgccgagagaacgaagggatgggagcgaggatccaccaggccctctcattcag
aagacacctattattcttgctaagcctccaggggaaagggccaaaccaccacagaatgca
cccgtcagtggcgctccagtcctggagaagcccatcatgctaatgaaagccagggatgat
gcagggaagccagggacaccgccagaggcagcagctcagtccgctggtcccgggccctcc
aagatggagaaggagggtcaacggcctactcagcctgtgtaccagatccaaaaccgagga
atgggtccatctgcttctggcagtgttgtggaccccatggttggtcagtctaaactcctt
catccagagaaaatgaagcacagcattaagcttgtggatgatcagatgaactggtgtgac
agtgccatggagtatttgagggaccagacagacatgttggtggtgggagttatcgggccg
cagggaactgggaaatctacgattatgtcgctgttatctgccaacacgcctgaggaagac
caaaggagttatatgttcagagcccagactcaagaaatcaaggaaagaggaggaaatcag
agcacgggtattgatttcttcatcacgcaggagagagtcatcttcctggatacgcagcca
atgctcagcccatctatcctcgatcacgtaatcaacaacgaccgaaagctgcctccagag
tacaaccttcctcatacatatgtagaaatgcagtctcttcagattgccgccttcctgttc
acagtgtgccatgtagtgatagtggtgcaggactggttcaccgacgtaaacatttacaga
tttctgcaaactgctgagatgctgaaaccttccactccgtctgcaagccacgacagcgcc
ggctcttcaggcagcgatgacggagcagagtactaccctcatatagtttttgtccagaat
aaagccagacgggaggatttctgtccaagaaatctgaagaacatgcatctggtggtggac
aaattaatggcacattctcatctgaaatacaaaggaacgttgtccatattggactgcaac
atctttccaggcctcgggcaggaatacctggataccgaagtcaacatgtttctgcttcca
gtccaagaaaatgacgaagaaaatctgaacaaagcaggatcaggaacatacccactgttc
tctctgctgccggggtacaggggacaccccaccttttccaccatgatctcaaaactccgc
agccagatgctcgccatgccccgctgtcagctgtcacacactattctcactgagaaaaac
tggtttcactatgcggctcgtatctgggatggtgtgaaaaagtcctcggcgctctctgaa
tacagtcgcctcctcagttag
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