KEGG   Kryptolebias marmoratus (mangrove rivulus): 108250032
Entry
108250032         CDS       T05608                                 
Symbol
dis3l
Name
(RefSeq) DIS3-like exonuclease 1
  KO
K18681  DIS3-like exonuclease 1 [EC:3.1.13.-]
Organism
kmr  Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:kmr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    108250032 (dis3l)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:kmr03019]
    108250032 (dis3l)
Messenger RNA biogenesis [BR:kmr03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Exosome cofactors
     108250032 (dis3l)
SSDB
Motif
Pfam: RNB OB_Dis3 Rrp44_CSD1 CSD2 Rrp44_S1 OB_HELZ2
Other DBs
NCBI-GeneID: 108250032
NCBI-ProteinID: XP_017295202
LinkDB
Position
LG15:complement(34315811..34345493)
AA seq 1045 aa
MIKTDKILHLKSCRGRKVRVVREHYVRERVPCFSSLCQAGCPNDGKVLPEDLTHYVVPDA
EVVLNFLEVLEVRELQGVVFTRTACQALHSKGRRYYNRLRNLLKDPRHDCVLFANEFQTY
SYCPREKGESQEAWQTRCVYAAAVWYYNHLAGVMNIVMITEDKNAVTQFSSLNSGVFVIS
LEDYLQDFWPDLKAAQDLYSSISQALQEKEAEDSQREFPEHLPAEVLEAGIKSGRYIQGS
LKVSKHRAQNEAFINNDSLFSKNTALSRGVLVFGSKSRNRAIHGDLVAVELLPKSEWKGK
VTALTEGQVDEKMGEDSKDKPMPTGRVVGILQRNWRDYVVTFPSRDKSQSQSRNSQRILA
IPWDRRIPKIRISTQQADVLQDHRVVVRIDSWESTSLYPNGHSVRVLGRAGELETEVQTI
LTENCIHVSPFSEAQLREMPVNSTEKLWTVDPAQVEKRRDLRESHLVFSIDPQGCEDVDD
TLSVRSLADGKLLELGVHIADVTHFVSEGSLTDLEARTRATTYYLADRRYDMLPAVLSSD
LCSLLGGADRYAMSVLWELDAQTLAVTKVWFGRTLIRSSYQLHYELAQALLNGEEAEVPE
LARLDSEERGIRLTELIKALETLTHVARHLRAQRDQGGALELEGVEVRAQLDEERNITAL
VPRQPLEVHETVAECMIYANHWVARKIQEAFPYQALLRRHPPPRQELFSPLVDTAKAAGF
TIDTRNNKALADSLDRAVDPQDGLVNRLLRMMATQAMSQALYFSTGSHPEDQFYHYGLAL
DRYTHFTSPIRRYADIVVHRLLTAALAVEEGAELVKPQSGNKELEELAGHINSRNKAALL
AQKSSVGVFQCLFFKERDPQKDPCCVADAIIYSIRDNGVLVFVPKYGVKGPVYMTNRDGQ
VVAVGSDGSCEWQSGSVRRYSDYISTTSCCGSASFRLFDHITIRISVTTINCHADTLNLQ
IISNKPHCSAAPQQSFSQNRNQMVQEVVRLAEEAQEKAALKPKLSKEEREFRQSRSPNLY
SLLEEVRELALMDLEAVSQICATTA
NT seq 3138 nt   +upstreamnt  +downstreamnt
atgataaagaccgacaagatcctccacctgaagagctgccggggccggaaggttcgggtg
gttcgggagcattacgtgagggagcgggttccctgcttcagctctctgtgccaggcgggc
tgtccgaacgatggcaaagtgctgcccgaggatttgacccactacgtggtgccagatgct
gaggtggtgctcaacttcctggaggttctggaggtcagggagctgcagggggtcgtcttc
acccggacagcctgccaggctctgcacagtaaaggacgcaggtattacaaccgtctgagg
aacctgctgaaggaccctcgccatgactgcgtgctctttgcgaatgagtttcagacgtat
tcatactgtccacgagagaagggtgagagccaggaggcgtggcagaccaggtgtgtatac
gccgctgcagtgtggtattacaaccacctggctggtgtgatgaacattgtgatgatcaca
gaggacaaaaacgctgtgactcaatttagcagcttgaactctggagtttttgtcatctcc
ctcgaggattatttgcaagacttctggccggatttgaaggcagctcaagacctctacagc
tccatctctcaggcgctgcaggagaaggaggctgaggactcgcagagagagtttccagaa
catcttcctgctgaagtcctagaagctggaatcaaatctggacgctacattcaggggtct
ctgaaagtgagcaaacatcgagcacagaatgaagctttcatcaacaatgacagtttgttc
agcaagaacactgctctcagtagaggggtgctggtgtttggctctaagagccgtaatagg
gccatacacggtgatctggttgcagtggagctgctgccaaagagtgaatggaagggaaag
gtcacagctctgactgagggacaggtggacgagaagatgggggaggacagcaaggataaa
cccatgccgacaggtcgtgttgtggggatcctgcaaagaaactggagggactatgtggtg
acattcccctccagggacaagtctcagtctcaaagcagaaattcccagcgtatcctggca
ataccctgggatcgacgcatcccaaaaatccggatcagcacccagcaggctgatgttttg
caggaccacagagtggtggtgcgcatcgactcgtgggaaagcacgtcgctctatcccaac
ggccacagtgtacgcgttctgggtcgagctggagagctggagactgaggtccagaccatc
ctcacagagaactgcatccacgtgtctccgttttctgaagcccagctgagagagatgccg
gtgaactcgacagaaaagctgtggacggtggacccagctcaggtggagaagcggcgtgac
ctcagggagtctcacctggtgttcagcatcgacccacagggctgcgaggacgtcgacgac
acgctgtcggtgcgcagccttgctgatgggaagctgctggagctgggggtccacatcgcc
gacgtcactcacttcgtctctgagggatcgctcactgacctggaggcccgaaccagagcc
accacgtactacctggcagaccgcaggtatgacatgctgccagctgtcctcagctcagac
ctctgctcgctgctggggggagccgacaggtatgccatgagcgttctgtgggagcttgac
gctcagaccctcgctgtcaccaaggtgtggttcggtcgcacactgatccgctcctcctac
cagctgcactatgagctggcccaggcacttctgaacggggaggaggccgaggtaccagag
ctggctcggcttgactctgaggagaggggcatcaggctgactgagctcatcaaggcactg
gagacattgacgcatgtagcgagacaccttcgagctcagagggaccaaggaggagcgctg
gagctggagggggtggaggtgagagctcagctggatgaggaaagaaacatcacggcgctg
gtccccaggcagcctctcgaggtccacgagaccgtggcagagtgcatgatatacgccaac
cactgggtggcgcgcaagatccaggaagcttttccttatcaggccctgctgaggcgccac
ccgccgcctcgacaggagctgttcagcccgttggtggacacggctaaggccgcgggcttc
accatcgacaccaggaacaacaaggccttagctgactctttggacagggctgtggacccc
caggacgggctggtgaacaggctgctcagaatgatggccacccaagccatgtcccaggct
ttgtacttctccactggttctcatcctgaagaccagttctaccattatggtctggctctg
gatcgctacacccactttacttcaccgatccgtcggtatgccgacatagtggtgcaccgc
ctgctaactgcagctctggcagttgaagaaggggcggagcttgttaaaccacagagcggt
aataaagagttggaggaactggctgggcacattaacagcaggaacaaggcagctctgctg
gcccagaaatcatctgtcggggtgtttcagtgtcttttcttcaaagaacgagatcctcag
aaggacccgtgctgcgtggccgacgccatcatctactccatccgagacaatggtgtgctg
gtgttcgtcccaaagtatggtgtgaaaggtccggtgtatatgacaaacagagatggtcag
gtggtggcagtggggtcagacggcagctgtgagtggcagagcggctcagttcgacgatac
tcagactacatcagcaccacgtcctgctgcggcagcgccagcttcaggctcttcgatcac
atcacaattcgtatttctgtcaccacaataaactgccacgctgacaccctgaacctgcag
atcatcagcaacaagccacactgcagtgcagcgccacagcagtccttctcgcagaaccgg
aaccagatggtccaagaggtggtgcggctcgctgaggaggcgcaggagaaggcagccctg
aaacccaaactgtccaaagaggagagggagttcaggcagagcagaagtcctaatctgtac
tctctcctggaggaggttcgagagctggccctgatggacctggaggcggtctcacagatc
tgtgcaacaacagcttag

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