Kryptolebias marmoratus (mangrove rivulus): 108250132
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Entry
108250132 CDS
T05608
Symbol
nedd1
Name
(RefSeq) protein NEDD1 isoform X1
KO
K16547
protein NEDD1
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
kmr03036
]
108250132 (nedd1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
kmr04812
]
108250132 (nedd1)
Chromosome and associated proteins [BR:
kmr03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Other PCM proteins
108250132 (nedd1)
Microtubules and associated factors
gamma-tubulin ring complex
108250132 (nedd1)
Cytoskeleton proteins [BR:
kmr04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Gamma-tubulin complex components
108250132 (nedd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
WD40
WD40_WDHD1_1st
WDR55
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
ANAPC4_WD40
EIF3I
WD40_RFWD3
Beta-prop_HPS5
WD40_MABP1-WDR62_2nd
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
Beta-prop_EIPR1
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_Vps41
Beta-prop_NWD2_C
Beta-prop_SPT8
Beta-prop_DCAF4
Beta-prop_NUP159_NUP214
Beta-prop_LRRK2
Beta-prop_IFT122_1st
KNTC1_N
Beta-prop_VPS8
Runt
DUF4979
Motif
Other DBs
NCBI-GeneID:
108250132
NCBI-ProteinID:
XP_017295352
LinkDB
All DBs
Position
LG11:26680011..26686032
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AA seq
660 aa
AA seq
DB search
MEEVTRLVSTGDCVKIWDAVTMAPLEQFNPHSISHPVAQACWSSNNQYLVSASSSGDKLV
VSSLKSSPVLVVELADGKKQTRVCLSSSSQFLVSGGLDHCVHIWDLKTKRLHRSLKDHKE
EVTCVSFNANDSCVASGSTSGDLVLHSLTTNLSSRAFGHGSNQPIHDLRLSSVKRSLLGS
VSDSGTVVLWDSNTQRELHVFDGAHKAPGSGLAFSPTSDLLVVSVGLDKKIVCYDTASKI
VLRSIRVDSPLTAVDFTMDGTGLVVGSTQGKIYQYDLRNTSTPTKTTVAHKTSVTCLRFQ
SNTSRHKSSKLGATKISSTKRSSSKLPSSHSDSAPSTGPAPHRQVTGTAGGAGVETVSRE
AEGQQGAGQGAEPVPAVGRNSLDIFSPTREGPDSGNQGRTGETLFGRTNVTSLETLSRED
GGQQLVGRGSLDIFSPVREDSGTGSQRKTPLGNQLGASAGRCYSSLSIFQSPPPIREEEP
ISAEACDSRKSDEASGYSLEGEAQTPPTTSQQTNQSQAAPPFFTPEPGLRRANGVQSQLS
YDSPVFGTPPPSAAASGPAAAAAVSSSLSQNIADVVGQGGSAPLTSLQIHFIQNMIHETL
EEFRTACHQDIINLQVEMIRQFYIQLTDIHGLIEKYSVNESLVEEIEKLREENRRLRANY
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggtgacacgcctggtgtccaccggagactgtgtgaagatctgggatgcggtt
accatggcgccgctggagcagtttaacccccacagcatcagtcaccccgtcgctcaggcc
tgctggagctccaacaatcagtacctggtgagcgccagcagcagcggggacaaactggtg
gtctccagtctgaagtccagcccggtgctggtggtggaactggctgacgggaaaaaacag
acccgtgtgtgtctgagctcctcgtctcagtttctggtcagtggaggtctggatcactgc
gtccacatctgggacctgaagaccaagaggctgcaccgctccctcaaagaccacaaagag
gaggtgacctgtgtgtcctttaacgccaatgacagctgcgtggcctcgggctccaccagc
ggggacctggtcctccacagtctgaccaccaacctgtccagcagggcgttcggccacggc
agcaaccagcccatccacgacctgcggctgtcctcggtgaagcgctccctgctgggcagc
gtctccgacagcggcaccgtggtcctgtgggactccaacacccagagggagctgcacgtg
ttcgacggcgcccacaaggccccgggctccggcctggccttctcccccaccagcgacctg
ctcgtcgtcagcgtcggcctcgacaagaagatcgtctgctacgacacggccagcaagata
gtcctgaggtccatccgtgtggacagtcctctgaccgcggtggacttcaccatggacgga
accggtctggtggtcggctccactcaggggaagatctaccagtacgacctgaggaacacc
agcacccccaccaagaccaccgtggcccacaaaacctccgtcacctgcctgcgtttccag
agcaacaccagccgacacaagtccagtaaactgggagccaccaagatctccagcaccaag
agatccagctccaaactgcccagcagccactcagactccgcccccagcacaggccccgcc
ccccacagacaggtgaccggcacagcaggaggcgccggcgtggagacggtgagccgcgag
gctgagggccaacagggggcggggcaaggggcggagcctgtccctgccgtggggcgaaac
agtctggacatcttctctccgactcgcgaaggtccagactcggggaaccaggggaggacc
ggagagaccctgtttggaagaacgaatgttaccagtttggagacgctgtccagagaggac
gggggtcagcagctggtgggtcggggcagtctggacatcttctccccggtccgagaagac
tcaggtaccggatcacagcgtaagacccccctgggaaaccagctgggggcgtctgcaggc
cgctgctacagctcgctgtccatcttccagtccccgccgcccatcagagaggaggagccg
atcagtgctgaagcatgtgactccagaaagtccgatgaggccagcggctacagtctggag
ggagaggctcagactccgcccaccacatcccaacaaaccaatcagagtcaggcggccccg
cccttcttcaccccggagccaggcctccgcagagcgaacggcgtccagtctcagctgagc
tacgactcacctgtcttcgggactccgccccccagcgcagcagcttcaggtccagctgcg
gcagccgccgtgtcctcttctctgtcccagaacatcgcagacgtggtcggacagggaggc
tccgccccgctgacatcgctgcagatccacttcatccagaacatgattcacgagactctg
gaggagttcaggaccgcgtgtcatcaggacatcatcaacctgcaggtggagatgatccga
cagttctacatccagctgacggatatccacggcctgatagagaaatattcagtcaacgag
tctctggtggaggagatcgagaagctgcgagaggagaaccggcgcctgcgagctaactac
tga
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