Kryptolebias marmoratus (mangrove rivulus): 108250187
Help
Entry
108250187 CDS
T05608
Symbol
nlrc5
Name
(RefSeq) NLR family, CARD domain containing 5
KO
K22615
NLR family CARD domain containing 5
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
kmr04054
]
108250187 (nlrc5)
Pattern recognition receptors [BR:
kmr04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
108250187 (nlrc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_6
NACHT
LRR_4
NLRC4_HD2
LRR_8
NOD2_WH
Atypical_Card
LRR_NXF1-5
AAA_25
AAA_22
WSLR
PhoH
Motif
Other DBs
NCBI-GeneID:
108250187
NCBI-ProteinID:
XP_017295434
LinkDB
All DBs
Position
LG11:27654568..27677415
Genome browser
AA seq
1858 aa
AA seq
DB search
MDDEVDRADGNVNSILAQDSSELFEILCSQSQSVIMSLWETAPPGSGLQTPGGPAAASEH
IRAMLEHFRDGSAADCCSFLQRVCMLCENMPMHLELRLLSVAGSSFSGQENSTLCVTNQK
PSPEEQLIKRPRIDHWQQHLKAAAGVLQRRWQRRSEGLLRDVQPEKVWVSLRTANRTRDR
PDQTPGPAERGNRTPEPDVDYGSLESRLTLEAFLQGCAGKVTVLCGPAGSGKTLLTSCLG
HQWANGLGPIPSSYLFVLLEFRQLNLLSSPLSLAELLFQHYFPPQNDDNHAKKAVMDYLV
SNPEQSCWLLDGYDEFHGKLNTQNQPLDSETPVPAADLLSGLLNRQLLPGSTVLLTCRLR
DLPDLDGLTDKVGQLLPWDHQEIREYVHSFFGVKDGSLGSEAADLLFSSRHLLAMSSFPA
LCNICCVFLQHLLQEKGRKGSKNTPEVRKAAGSAQRGEETNSSNGDEVPATLTQLYLAVV
AAFLSRWPHGGEDDRTNTSTFPQSSVPALSQLSRLALEGLEKGNILFWEDDVPANVFELS
VRTGLFSQVEVRGHDGKLVSAYSFTHLTVQEFLAALRIMTSNDVSDTQLKKRFSLKTRWT
TKSDQKTVFTDSLYLYVCGLASPRCTQAVVQVAQASGLKGFQNWVLERQDLVLKLLKSLC
LSNSLTGPKVLQLCHYVQESQNQQLAHQVLSVRPTLELRNIWLLPDDIHALAFVVNAAGD
TGVGLDFGSCSMELECLEVLTRCQNIHYLSFRSRKYGDKFAGKLAAILPEFTALRKLEFW
GAALTAAGAASVASALRRCPTVTELNFSDNNLQDEGIQHMAEVFTELQNLVSVTLGRNNT
TLKAVEGLVKKMSSCLNIQRVHADGMKELTVTFSHKTNPEPTVSLLNQKWSSSDMKTLAE
SLSNCPALSVLNLSGGQWDEETLKTLTEFVPKFSVTEKIVLNGSCSSLEGLVVLTALLSD
CLSVAELHVRLQSPVLVSVVFPGGREQPAAETSKKLCLSGCNLLPGDLDKVWRSLGTSCG
LTELDLSCNRLGDNGLKKLLEVLPRLREVREVHVSENSISMNGAALLAAALCSNDSLTET
LISKRGKNQVILWFSHDTREDKLQRKLFRINSSSLLPSDVTKICKKLVQCRFFLELEFSH
CSFAEKTMEKLIQELPKMSLLQRLKMSGSVTAAADALMLLGCLTDSQRVSAVELSLQSES
FINFHGVKAEPVNCRLTGFSFEADGCVLINRLLQILQQDQQLSYLDLSGNQLEDEGVKCL
LDSLPRLHISSYMNLSKNRLTQRGLLDVVSTLSTCARVSQVDISLGEAQRCLIWFRQNGG
GEQTLRVSSSNLELHHLLRLAEILSKCPSLTRLQLKNNSLQSEWIQNFVKVLTCGGRGRA
VSVEESWIGSEEAVTLLRRCLELNRNIQTIRIQQTTLHLTLKNPEPTAITCEAELPAQLM
ATSISLVDCSVDGNQFASLRNVILQCPSLTDLELGAGGAEFLSFLLPLLPNLASLSLGVK
ERSVSAVEELSQVFHMSTSIQSLNLSGHLISDAAAQSLSDLLPRLRSLNLARCVWSAEGG
RRLIGALNQAGRLEDLCLDAAAQLDRNSWTCLAQALRNLTSVRSLKLNEIVKTSEEDGVL
DVLAGLEGLTQIKEIELDGWRMADQGIKQLIKFLPSWKELRKISLSKNLISDPSGEKLLD
ALRSCFHLEELHLSSNRLGDVSAARMALILPSMTHLSVLDISENQITKEGAISLSAAIMS
LKKLKRIHLTSVGTSELSAVVASLGHCAFIQDVGLGWNNCGDDVALQLTEVLPFCPRLTR
IDLECNRVSAVGVEKLVGALRSCPALQIIRLWRNRVSAGEAHSFSLREVRLNFSSTIM
NT seq
5577 nt
NT seq
+upstream
nt +downstream
nt
atggatgacgaggtcgaccgagccgatggaaatgtgaactccatcttggctcaggactcc
tccgaactgtttgagatcctctgcagtcagtcgcagtcagtcatcatgtctctgtgggag
acggcgccccctggaagcggcctgcagacgcccggcggtcctgctgcagcatcggagcac
atcagggccatgctggagcacttcagagacggcagtgctgcagactgctgcagcttcctg
cagagggtctgcatgctgtgtgagaacatgcccatgcacctggagctgaggctcctgtct
gtggctggaagctccttcagtgggcaggagaactcgactctctgtgtaacgaatcagaaa
ccgtcgccggaggagcagctcatcaaacgcccacggatcgatcactggcagcagcacctt
aaagcagcggcaggcgtcctgcagcggcggtggcagagacggtccgaaggcctgctgagg
gacgtgcagccggagaaagtctgggtcagcttaagaaccgcaaacagaaccagggaccgg
cccgatcagaccccaggccctgcagagcgtggaaacaggacaccggagcctgatgtggat
tacgggagtctggagtccagactgactctggaggctttcctgcagggatgtgcaggaaaa
gtcacggttctgtgcggcccagccggatcaggaaaaactctgctgacgtcttgcctcggt
catcagtgggcgaatggattaggccccatcccttcatcctacctgttcgtcctgctggag
tttcgtcagctcaacctgctgtcctcccccctgtccctcgccgagctgctctttcagcac
tacttcccccctcagaacgacgataatcacgcaaagaaagctgtcatggactacctcgtc
tccaacccagagcagagctgctggcttctggacggctacgatgagtttcacgggaaactc
aacacacaaaaccagccgttggactccgaaacgcctgtacctgcggcagacctcctctca
gggttgttgaaccgccagcttctcccaggaagcaccgtgctgctcacctgtcgactgcgg
gacctcccagatttggacggcttgacggacaaagtgggacagctgctgccgtgggaccac
caagaaatcagggaatatgtgcacagtttctttggtgttaaagatggaagtcttggatct
gaggcagcagatctccttttctccagtcgacacctcctcgccatgtcgtccttccctgcc
ctgtgcaacatctgctgcgtcttcctgcagcatttactgcaagaaaaagggcgtaaagga
agcaaaaacactccagaagtaagaaaggcagcaggcagtgcacaaagaggagaagaaacg
aactcttcaaacggagacgaagttcccgccactcttactcagctctacctcgctgttgtt
gctgcgtttctcagccgatggcctcacggaggagaagatgaccgaacaaacacctcaaca
tttcctcagagttctgttcctgcactgagtcagctgagccggctggcgttggagggtttg
gagaaaggcaacatcctcttttgggaagacgacgttccggcgaatgttttcgagttatca
gtcagaacaggactcttctcacaggtggaggtcagaggtcacgatggaaagctcgtcagc
gcgtacagtttcactcacctgactgtgcaggagttcctggctgctttaagaatcatgacg
agtaacgatgttagtgacacacaactcaagaagaggttcagtctgaagactcgctggacc
accaagtcggaccagaagactgtgttcacggactccctgtacctgtacgtgtgcggcctg
gcgtcgccgcgctgcacccaggcagtggttcaggtcgcccaggcgtcgggtctgaaaggg
ttccagaactgggttctggagcgtcaggacctggttctgaagttactgaagtctctgtgt
ctcagcaacagtctgactggaccgaaggtcttacagctttgccactacgtccaggagagt
cagaaccaacagctggcccatcaggttctcagtgtgagaccgaccctggagctgaggaac
atctggctgctacccgacgacatccatgctttggcctttgtggtgaacgcagcgggagac
accggcgtcgggttggacttcggttcctgttcgatggagctggagtgtttagaggttctg
acccggtgtcagaacattcattacctcagctttcgcagcagaaaatatggtgacaagttt
gcagggaagctggcagcgattttaccagagttcacagccctgaggaagctcgagttctgg
ggtgccgccctgacggctgcaggcgcagcgagcgtggcctcggctctacgacgctgtccc
accgtcacagagctgaattttagtgacaacaatctgcaggacgaaggaatccaacacatg
gctgaggtttttaccgaacttcagaacctggtttctgtaacgctgggacgaaacaacacg
actctgaaagctgtggaaggtctcgtgaagaaaatgtcttcctgtctgaacatccagaga
gttcatgcagacgggatgaaagagttgacagtgacgttcagccataaaacgaatcctgag
ccaacagtcagcttgctgaatcagaagtggagcagctcggacatgaagacgctcgccgag
tctctgtccaactgtcccgctctgtctgtcctgaatttgtctggaggtcagtgggatgaa
gaaactttgaagactctgactgagtttgttccgaagttcagcgtcacagaaaagatcgtg
ctgaatggcagctgctcgtctctggagggtctggtggttctgaccgcgctgctgtccgac
tgcctctctgtggcagagctgcacgtcagactgcagagcccggttctggtgtctgtcgtg
tttcctggaggcagagaacaacctgcagctgaaacatctaaaaaactctgcctcagcggc
tgtaatctgctgcccggggacctggacaaagtctggagaagtttaggaacttcctgtggc
ctcactgagttggacttgtcctgtaatcgtttaggggacaacggtctgaagaagctgttg
gaggttctgcctcggctcagagaagtccgggaggttcatgtcagtgagaacagcatcagc
atgaacggcgccgccctgctggctgcagctttgtgctccaatgacagcctgacagaaacc
ctcatcagcaaaagaggcaaaaaccaggtgatcctgtggttcagccatgacaccagggaa
gacaaacttcagagaaagttgttcagaataaacagcagcagcctcctgccgtctgatgtg
accaaaatatgtaaaaagctggtccagtgtcgcttctttttggagttagagttctcccac
tgctccttcgctgagaaaacgatggagaaactgatccaagagttaccgaagatgtctttg
ctgcagagactaaagatgagcggcagcgtcacggccgcagccgacgctctgatgctgctc
ggctgtttgacggacagccagcgggtctcagcggtggagctcagcctgcagagtgaatcc
ttcatcaacttccatggagtcaaagcagaaccggtgaactgcaggctaacaggcttcagt
ttcgaagcagacggctgtgttttaatcaaccggctgcttcagatcctgcagcaggaccag
cagctttcttatctcgatttgtcagggaaccagctggaagacgaaggagtgaaatgtttg
ctggattctctcccgagacttcacatcagcagctacatgaacctcagtaagaaccggctg
acgcagcgggggctgctggacgtggtcagcaccctctctacctgcgctcgtgtttctcag
gtggacatcagtctgggagaagctcagcggtgtctgatctggttcagacagaacggaggc
ggcgaacaaactctcagagtcagcagcagcaatctggagctccatcatctcctcagatta
gcagagattttatccaaatgtcccagtttgaccagattacaattaaagaacaactcgctg
cagtcggagtggatccaaaactttgtgaaagttttaacctgcggtgggagaggacgcgcc
gtcagcgtggaggagagctggattggatctgaggaagctgtgactttactgcgtcgctgt
ctggagctgaacagaaacattcaaactatcaggatccaacaaaccacactacatctgact
ctgaagaacccggagccgaccgccatcacgtgtgaagctgaacttcctgctcagctcatg
gccacaagcataagcctggtggattgttctgtggatggaaaccagtttgcatctctgagg
aacgtcatccttcagtgtccgtcgctgacagacctggagctgggtgccggtggagcggag
ttcctctcctttctgctgcccttgttgccaaatctggcctccctcagtcttggagtcaaa
gagaggtctgtgtctgcggtggaggagctctctcaggtcttccacatgtccacatccatt
cagtccttgaacctctcgggtcacctgatcagtgacgctgcagctcagagtttgtccgac
ctgctgcctcgtcttcgatcactgaatctggcccggtgtgtgtggtccgcagagggaggc
cggcggctcatcggagctctgaaccaggcgggacgtttggaggatctgtgtctggatgca
gcggcgcagctggacaggaacagctggacgtgtttggctcaagctttaaggaatctaacc
tcggttcgaagtctaaagctaaatgagattgtaaaaacctctgaagaggacggggtcctg
gacgtcctggctggtttggagggactcacacagataaaggagatagagctggatggctgg
aggatggctgaccaggggataaaacagctgattaaattcctcccgagctggaaggagctc
aggaagatcagcctctcgaagaatctcatcagtgacccgtcgggagagaagctgctcgac
gcgttgaggagttgtttccacctggaggagctccacctgtccagtaaccgcctcggtgac
gtctctgcagccaggatggctctcatccttccatcgatgactcacctctcagtgttggat
atttcagaaaaccagattacaaaggaaggagccatcagtctgtctgcagcaataatgagc
ctaaagaagctgaagaggattcatctgacctccgtcgggacctcagagctgagcgccgtc
gtggccagtttgggtcactgtgccttcatacaggatgtgggtctgggctggaataactgc
ggcgacgacgttgccctgcagctgaccgaagttctccctttttgcccccgactgactcgc
atcgatctggagtgcaacagagtgagtgcggtcggggtggagaagctggttggagcgctg
aggtcctgccccgccctgcagatcattaggttgtggaggaacagagtgtcggcgggtgaa
gctcacagcttcagtctgagggaggtgaggctgaacttctcctccaccatcatgtga
DBGET
integrated database retrieval system
