Kryptolebias marmoratus (mangrove rivulus): 108250250
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Entry
108250250 CDS
T05608
Symbol
abca5
Name
(RefSeq) ATP-binding cassette sub-family A member 5 isoform X1
KO
K05648
ATP-binding cassette, subfamily A (ABC1), member 5
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
108250250 (abca5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
kmr02000
]
108250250 (abca5)
Transporters [BR:
kmr02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA5, 6, 8, 9, 10 subgroups
108250250 (abca5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
RsgA_GTPase
AAA_29
AAA_23
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
108250250
NCBI-ProteinID:
XP_017295530
LinkDB
All DBs
Position
LG17:complement(26643161..26679196)
Genome browser
AA seq
1706 aa
AA seq
DB search
MYFIPEASLSETTSRPYVVQMRNTGGMQLMFRRHPGVWTQTRSLLYKNLLIKWRTKQQSL
QELILPLLLLALLILISILNPHVSHEGINTVKLQSDFHFQNIKGLGYMPITNITTHIMEE
VAQEINMQNRLDLFSSEEDLENASLYEPSNYIGVVFTDGSATSYKLRFPYNKLPLPSDYI
ESVASCYSSLVNCRAANYWFSGFTRLQSLIDAAIIQMQTRRSVWSELNLNVVMMGQPGSV
EVHKFPHALISIYLVLAFTPFVTFLIVNVAAEKEHRLKDTMTMMGLYDTAFWLSWGLLYA
ALVTAMSVLMAIIATLTALFPNSNFFVIFSLIFLYGISSIFFSFMLTPLFKKPKFASTVG
SMLTVVFGCMSLFTVLMKDFPQPLVWLLCLLSPSAFSIGIAQVVYLEAQGDGAVFSSLTN
GPHPLYVPLLMLVLDCVLYLLLAIYLDQVLPGEFGSRRSLVYFLKPSYWSKRRKRYVEVS
SVYDAEVNGGPGEEECVEPVSPEFRGKEAIRISNIQKVYKDKDSAVEALRGLTFDIYEGQ
ITALLGHSGAGKSTLMNILCGICPPTNGSATIYGSPVAEIAEGCEMKQLVGICPQFNIIF
DVLTVEEHLRIFAAIKGIPPADVDAEVSKVLKDLDLEKIMTAQAKNLSGGQKRKLSVGIA
ILGDPKILLLDEPTAGMDPCSRHQVWSLLKSRRAGRVIVLSTHYMDEADILADRKAVISQ
GQLKCVGSSLYLKIKCGVGYHLRQEAPCFINTVFRFRTVVFNSRYWFVCRMSISEGCDAE
KVSSLIQHHVPKAKLSCQHEAELTFTLPFESMDTFPGLFSELDSQPQLGIINYGVSMTTL
EDVFLRLEAEAEVDQADYSVFNREQAEDECDGASLDDTDQRLLTFSDNKSDVLSGHALWR
QQFSAVAWLHMLNMRREWKAFVYTLVLFLLFVAAVLVVSLATGNIQIHSPERQFLPMYLL
KKNQAPHRYASSLLVQNASDSDISDFINNLESQDIKVELMKHRDYMSEAPHSAAINVTGS
NKGFKYILAFNSSNVHSLPMAVNILSNALLRGLNGSGLIRTWSKPFEYQIPDATSYALVY
IEAIMLGMLAAGMPAYFAMDHTRDREIKCRSTLRISGLLPSAYWCGQAAVDIPFYYVILS
CMNIILFSFHSGNLLKPSHLTSVVLCTVGFGPATILFTYVVSFGFTRVQSNRDFFSFISM
MVCVVSASIVQLSFVNDNPELTRILHNTLCLLNPLYPLMGCLNCITKATFLPTLYEENFL
WKSLLISVVAPYLQCILLLFLLRWLEIRYGGRAMKSDQLCRISSKSKSKVERVPEEGLNE
DEDVQMEKARVKEALTCQSCEEKPAVVVSNLRKQYTGRKEGFSFGKKIKMATKNISFCVR
KGEVLGLLGPNGAGKTTIMHMLSGDTAPTAGQVLMGDYSTEFRPVDSPVDHVGYCPQVNP
LWPRVTLQEHLEIYAAIKGLKGHDVPGIIKRVSDALELKDHLNKQAKTLSAGLKRKLCFA
LSMIGNPQIVLLDEPSSGMDPKSKQRMWRAMRAAFRNRQRGAVLTTHYMEEAEAVCDRVA
IMVSGQLRCIGSIQHLKGKYGRGYSLEVKLREELTGLQQVALLHKEILRIFPHAARQDSF
TTLMVYKIPMEDVRSLSQSFSQLESAKQTFNFEEFNFSQSTLEQVFLEFAKQQESDEEEV
GSLSTTFQWQRLQQDVQHADSVVHQL
NT seq
5121 nt
NT seq
+upstream
nt +downstream
nt
atgtatttcatacctgaggccagccttagcgagacgacctcccgtccgtacgtcgtccag
atgaggaacaccggcggcatgcagctgatgttcagaagacatcctggagtctggacccag
accagaagcctcctctacaagaacctgctcatcaaatggagaaccaagcagcagagcctc
caggaactgatcctccccttgctgctcctggctctcctgattctcatcagcatcctgaat
cctcatgtcagtcatgaaggcatcaacacggtgaagctgcagagtgacttccacttccag
aacatcaagggtctgggctacatgcccatcaccaacatcaccacgcacatcatggaggag
gtggcccaggagatcaacatgcagaaccgtctggatctgttttccagcgaggaggatctg
gagaacgccagcctctatgagccctccaactacatcggcgtggtgttcacggacggctct
gccacgtcgtacaaactgcgctttccgtacaacaagctgcccctgcccagtgattacatc
gagtctgttgccagctgttacagcagcttggtgaactgcagagctgctaactactggttc
tctggtttcacccgcctccagtctctgatcgacgcagccatcatccagatgcagaccaga
cgctcggtgtggagcgagctgaacctgaacgttgtcatgatgggccagccgggctcggtg
gaggtgcacaagttcccccatgcactcatctccatctacctggtcctggccttcacgccg
ttcgtcaccttcctcatcgtcaacgtggccgctgagaaggagcaccgcctcaaagacacc
atgaccatgatggggctttacgacacggccttctggttgtcatgggggcttctgtacgct
gctctggtgaccgccatgtccgtcctgatggccatcattgccacgctcacagctctgttc
cccaacagcaacttcttcgtcatcttttccctcatcttcctctacgggatctcctctatc
ttcttctccttcatgttgacgccgttgtttaagaagccgaagtttgcgagcaccgtgggc
tccatgctgacggtggtgttcggctgcatgtcgctcttcaccgtgctgatgaaggacttc
ccgcagccactggtctggctgctctgcctgctctcccccagcgccttctccatcgggatc
gcacaggtggtttacctggaggcgcagggagacggcgccgtgttttcctctctgaccaac
ggtcctcatcctctctacgtccctctgctcatgctggtcctggactgcgttctctacctt
ctgttggcgatttacctggaccaggtgcttccaggtgagtttggatcgaggagatccctg
gtctacttcctgaagccgtcctattggtccaagcgcaggaagcgttacgttgaagtgagc
tccgtttatgatgctgaagtgaacggcggtcctggtgaggaggaatgtgtcgagcccgtt
tcccccgagttcagagggaaagaagccatccgcatcagcaacatccagaaagtctacaaa
gacaaggacagcgcggtggaggctctgagaggcctgacctttgacatctacgagggtcag
atcacggctctgctggggcacagtggcgctggaaagtccacgctcatgaacatcctgtgt
ggcatctgcccgcccaccaacggctcggccaccatatacggctctcccgtggcagagatc
gccgagggctgcgagatgaagcagctggtgggaatctgccctcagttcaacatcatcttc
gatgtgctcaccgtggaggagcacctccggatctttgctgccattaaagggatccccccg
gctgacgttgatgctgaggtctccaaagtgctgaaggatctggacctggagaagatcatg
acggctcaggccaagaacctgagcggaggccagaagaggaaactgtcggtgggcatcgcc
atcctcggggatccaaagattctgctcctggatgaacccaccgctggaatggacccctgc
tccagacatcaggtctggtctctgctgaagagccggcgagcgggaagagttatcgttctc
agcactcactacatggacgaggcggacatcctcgctgatcgtaaagctgtgatctctcag
gggcagctgaagtgtgtcggctcttctctgtatctgaagatcaagtgtggcgttggatat
catctcaggcaagaagctccttgtttcataaacacagtgttcaggttcaggacagtagtc
tttaactccaggtattggtttgtctgcaggatgtcgatcagcgagggatgtgacgcagaa
aaggtctcgtctctgatccagcatcacgttcccaaagcaaagctgtcctgccagcacgag
gcggagctgaccttcacgctgcccttcgagagcatggacacgtttccaggcttgttttcg
gagctcgactcgcagccacagttggggataattaattacggggtttccatgacgacgttg
gaggatgttttccttcgtttggaggcagaagctgaagtggatcaagctgactacagtgtg
tttaatcgagagcaggcagaggatgaatgtgacggcgcctctctggatgatacggaccag
cgcctgctcaccttctcagacaacaagtccgatgtcctgtcgggccacgctctgtggcgg
cagcagttcagcgccgtggcgtggctgcacatgctcaacatgcgccgcgagtggaaggcc
ttcgtttacaccctggtcttgttcctgctgtttgtcgcggccgtcctcgtcgtctctctg
gccacaggaaacatccagattcactctccagagcgtcagttcctgcccatgtacctcctg
aagaagaaccaggcgccccacagatacgcctccagcctcctggttcagaacgcctcagac
tctgacatttctgacttcatcaacaacctggagtctcaggacatcaaagtggagctgatg
aaacacagagactacatgtctgaagctcctcacagcgctgccatcaacgtcacaggatcc
aacaaggggtttaaatacatcctggccttcaacagctccaacgttcactccttacccatg
gctgtgaacatcctgagcaacgctctcctcagaggcctgaatggttcggggctgatcaga
acctggtccaaaccctttgaatatcaaatcccagatgcaacatcttacgctctggtctac
atcgaggccatcatgctggggatgctggcagctgggatgcccgcttactttgccatggat
cacactcgagatcgagagattaagtgtcgttccacgctgcggatctctggcctcttgccg
tcagcctactggtgcggccaggcggccgtggacatccccttctactacgtcatcctgtcc
tgcatgaacatcatcctgttctccttccactcaggaaacctgctgaagcccagccacctc
acctctgtggttctctgcaccgtcggcttcggcccagccacgatcctcttcacatacgtg
gtttcttttgggttcacccgagtccagagcaacagggacttcttctccttcatctccatg
atggtgtgtgtggtgtccgcctccatcgttcagctgtcgtttgtgaacgataatcctgaa
ctgaccagaattctgcacaacacgctgtgtctcctgaacccgctgtatcctctgatgggc
tgcctgaactgcatcacgaaggccaccttcctgccgactctgtacgaggagaacttcttg
tggaaaagtctcctcatctcagtcgtagctccgtatctgcagtgcatcctgctgctcttc
ctgcttcggtggctggagatccgttacggaggacgggcgatgaagagcgatcagctctgc
aggatctcatccaaatctaaatccaaagtggagcgggtcccggaggaagggctgaacgag
gatgaggatgttcagatggagaaggcccgcgtgaaggaggcgctcacctgtcagtcctgt
gaggagaaaccggctgtggtcgtcagtaacctgaggaagcagtacacaggcaggaaagaa
ggtttttcttttggcaagaagatcaaaatggccacaaagaacatctcgttctgtgttcgc
aaaggtgaagtcctcgggctgctgggccccaacggagccgggaagaccaccatcatgcac
atgctgtcaggagacaccgcccccacggcaggacaggttctgatgggagactacagcacc
gagttccgtccagtggacagtcctgtggaccacgtgggttactgtccacaggtcaaccct
ctgtggccccgggtcactctgcaggaacacctggagatctacgccgccatcaagggtctg
aaaggacacgacgtccccggcatcatcaaacgggtgtcggacgctctggagctgaaggat
catttgaacaaacaggccaagactctttcagcaggactcaaacggaagctgtgcttcgct
ctcagtatgatcgggaacccgcagatcgttttactggatgaaccctcgtcaggaatggat
cctaaatccaagcagcgcatgtggagggccatgcgtgctgcgttcaggaaccgtcagcga
ggagccgtcctcaccacgcactacatggaggaggccgaggccgtgtgcgaccgcgtcgcc
atcatggtttcgggccagctgaggtgcatcggctccatccagcacctgaaggggaagtac
ggccgaggctacagcctggaggtgaagctccgggaggagctgacgggcctccagcaggtg
gcactgctgcacaaagagatcctccgaatcttccctcacgccgcgcggcaggacagcttc
accactctgatggtttataagatccccatggaggacgtcaggtccctgtcccagagcttc
tcccagttagagagcgccaaacaaacgttcaactttgaggagttcaacttctcccagtcg
accttagagcaggtgttcctggagttcgccaagcagcaggagtccgatgaagaggaggtg
ggctccctcagcaccaccttccagtggcagcggctgcagcaggacgtccagcacgctgac
agcgtcgtccatcagctctaa
DBGET
integrated database retrieval system
