Kryptolebias marmoratus (mangrove rivulus): 108250318
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Entry
108250318 CDS
T05608
Symbol
smyd1a
Name
(RefSeq) histone-lysine N-methyltransferase Smyd1 isoform X2
KO
K11426
[histone H3]-lysine4/36 N-trimethyltransferase SMYD [EC:
2.1.1.354
2.1.1.357
]
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr00310
Lysine degradation
kmr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
108250318 (smyd1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
kmr03036
]
108250318 (smyd1a)
Enzymes [BR:
kmr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
108250318 (smyd1a)
2.1.1.357 [histone H3]-lysine36 N-dimethyltransferase
108250318 (smyd1a)
Chromosome and associated proteins [BR:
kmr03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
108250318 (smyd1a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SET
zf-MYND
TPR_12
TPR_10
TPR_NPHP3
Motif
Other DBs
NCBI-GeneID:
108250318
NCBI-ProteinID:
XP_017295634
UniProt:
A0A3Q3EPI6
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Position
LG14:26832256..26838997
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AA seq
475 aa
AA seq
DB search
MTGGNMELFESEKKGRGLRATRELQTGEVVLAEPSYSAVVFDSLAYQVCHSCFRRQAKLH
RCTQCRFAHYCDRTCQTACWEEHKQECAAIRTLGFPPNQNVRLAARMMWRRKKDQGLASD
GQLVAADLLQDHLGDLPEEELKKLQSDVDNLLKFCSIAAKHHSVEDIRHIFGVIRCNRLP
LTDQRGRQDVGWGVFPSLSLVNHDCWPNCAVTFNHGNQSAVSSALHSKMRMELRALRKIS
EGEELTFGYVDLLNLSADRQQQLKERFHFDCSCQRCSQHAGDDLMSAAAESKPPADKVKE
VTAFSKESLQKIEKAGTDGDYREALKLSHECLEKQENVLADTHLLRLRVFGVATEALSHL
KKFSEAAEVARRMVEGYEKLLQPNNAQLGMAMMKAGVVHWHAGQVEAGHNLICKAYRILM
ATHGPNHSVTKDLEAMRSQTEKELKMLKEIDAGKKQPMAASSSAEETAKGFLRKQ
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgaccgggggcaacatggagctgtttgagtcggagaagaaaggtcgaggtctgagggcc
accagggagctgcaaaccggggaggtggtcctggctgagcccagttactctgcggtggtc
ttcgacagcctggcctaccaggtgtgccacagctgtttccgccgtcaggccaagctgcac
cgctgcactcagtgccggttcgcccattactgcgaccgcacctgccagacggcgtgctgg
gaggagcacaagcaggagtgcgccgccatcaggactttaggcttccctcccaaccagaac
gtccgcctggcagctcggatgatgtggcgcaggaagaaggaccagggtctggcctcagac
gggcagttagtggctgcagacctgctgcaggaccacctgggggatctgcctgaagaagag
ctgaagaagctccagagcgacgtggacaacctgctgaagttctgctccatcgcagccaag
caccactccgtggaggacatccgtcacatcttcggtgtgatcagatgtaacagacttcct
ctgaccgatcagagaggtcggcaggacgtcggttggggcgtttttcccagtctgagcctc
gtcaaccacgactgctggcccaactgcgccgtcaccttcaaccacgggaaccaatcagct
gtgagttctgctcttcactccaagatgaggatggagctgcgagctctgaggaagatctcc
gagggcgaggagctgaccttcggctacgtggacctcctgaacctgtcggctgatcgccag
cagcagctgaaggagcgtttccacttcgactgcagctgccagcgctgcagccagcacgcc
ggcgatgacctgatgtcagcggcggcagaaagcaagcctccggctgataaggtcaaagag
gtgacggccttcagcaaggagagtctgcagaagattgaaaaagctggaaccgatggagat
tacagagaggcgctgaagctgagccacgagtgtctggagaagcaggagaacgttttggcc
gacacgcacctgctcaggctccgggtgttcggcgtggccaccgaggcgctgtcgcacctg
aagaagttttctgaggctgcagaggtcgcccgcaggatggtggagggatacgagaagttg
ttgcagcccaacaacgcccagctggggatggccatgatgaaggcaggggtcgtccactgg
cacgcggggcaggtggaggcggggcataacctgatctgtaaggcgtaccggatcctgatg
gcgacccacggaccgaaccactccgtcaccaaagacctggaggccatgcggtcgcagacg
gagaaggagctgaagatgctgaaggagatcgatgctgggaagaagcagccgatggccgcc
agcagctctgctgaagaaacagctaaaggtttcctccgcaagcagtaa
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