Kryptolebias marmoratus (mangrove rivulus): 108250410
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Entry
108250410 CDS
T05608
Name
(RefSeq) protocadherin-1-like isoform X1
KO
K16498
protocadherin delta 1
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
108250410
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
kmr01009
]
108250410
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
kmr04515
]
108250410
Protein phosphatases and associated proteins [BR:
kmr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
108250410
Cell adhesion molecules [BR:
kmr04515
]
Cadherins
Protocadherins
108250410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Cadherin_CELSR2_9th
PepSY
Fibulin_C
Syndecan
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
108250410
NCBI-ProteinID:
XP_037833212
LinkDB
All DBs
Position
LG9:30407663..30583433
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AA seq
1214 aa
AA seq
DB search
MAALRWDVVALVAVALMVSCGAAPTDILYRVPEEQPPNTLIGSLAADQGLPDTGHLYKLE
IGAPYLRVDGKTGDIYTTEIPIDRERLRDCRNLFEDDKCFLEFEVSITDMVKGIGSGPRL
IEGRIEVLDINDNTPQFSSPILTLAIPENTHIGTLFPIAMATDRDSGSNGVAEYSLSAGL
DADQLFSLQVALDTDEKQPQLVVMGNLDREKKDSYDLNIRVVDGGKIPRASSALLRVTVT
DQNDNPPKFERNHYEAELPENSPLGHSVLQVRANDADTGINGEIDYSLHQASETVQRLLR
IDRATGVIYVKGLVDREEETFLKFFVVARDRGPNAKSSKVLVTISVMDQNDNSPAIEIRG
IGLVIHQEGVANISEDMPIGTPVALVQVSDRDEGENAVVTCVVAGDVPFQLRPASESASD
RKRKYFLQTTTLLDYERIKDYRIEIVAVDSGNPALSSTNSLKVQVTDINDNTPSFSPPLL
EVDFAEGNQPGDKVLDVVASDADSSSNAELVYSIIELSAARLFEVDANTGEVRVKNMLDR
EDKERYEFRVAAADKGVTSKTGTATVVVNVLDRNDNDPKFTLNGYSFSVIENMPPLNPVG
VVTVNDADKGENSRVTLFVEPDNGKFIIQNGTGTILSSISFDREKESTYTFRLKAVDSGE
PPRSSFVGVTINVLDENDNAPYVTKPSNSSFIYLQPVTPPDTRIEVVKAEDMDAGPNAEL
LYSITGGNPYGLFQISPSSGEITLTQPLPGKHNGLHRLVVRVSDRGKPPRHTTTLVHVFI
NETKSNVSLIEALVGHSLYTPLDRDIAGDPDYSYSQQRNNFLYAILAGASVVILVIIAVV
VIRYWLQKDTKSGYQAGKKESKDLYAPKQGPKNGKVKKNKKNKAPKPTKPLEEDEEASLQ
KGLKFNLINDVNDSPRIHLPLNYPPGSPDLGRHYRSNSPLPSIQLQPQSPSASKKHQAVQ
DLPATNTFVGTGDNNSTGSDQYSDYSYKANPPKYSNKQLPHRRVTFSTSNQAQDLQDASQ
HSYYDSGLEESETPSSKSSSGPRIGPLALPEDHYERTTPDGSIGEMEHPENDLRPLPDVA
MTGNCTRECTEFGHSDSCWMPGQPSPNRKVSKSAPKLSTFVPYQEMDGQEHLMANGSPKP
MMAEERGTGGGGAGGSSSKVANMRFMTPYSSAYPGSGDSSGKDCGLEEIPLSQAAEYHSA
TTPTGQTSKREIYL
NT seq
3645 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgctgaggtgggatgtcgtggcgctcgtggccgttgccctgatggtttcgtgc
ggcgctgcgcccacagacatcctgtaccgggttcctgaggagcagccgcccaacacactg
attggcagcctggcggcggatcagggcctgcccgacaccgggcatctctacaagctggag
atcggcgctccgtacctgagagtggatgggaaaaccggagacatctacaccactgagatc
cccatcgaccgcgagagactcagagactgccgtaacctgtttgaggacgataaatgcttc
ctggagttcgaggtgtccatcacggacatggtgaagggaatcggctcagggccgcggctc
atcgaaggacgcatcgaggttctggacatcaatgacaacacgccacagttctcctcaccg
atcctcaccctggccattcctgagaacacccacattggcaccctcttccccatcgccatg
gcgaccgacagagactccggctccaacggcgtggccgagtactctctgagcgctggcctg
gacgctgaccagctcttcagcctgcaggtcgccctggacacggacgagaagcagccgcag
ctggtcgtcatgggcaacctggaccgggagaagaaagactcgtacgacctgaacattcga
gtcgtggatggcgggaagataccgagggcgagcagcgctctgctgcgggtcactgtgacg
gatcagaacgacaacccgccaaagttcgagaggaaccactacgaagccgaacttccggag
aacagtcctctgggacactcggtgctgcaggtccgagccaatgatgcagacacaggcatc
aatggggagatagactacagccttcatcaggcgtccgagactgtccagaggcttctgcgc
atcgatcgggctacaggggtcatttacgtcaaaggcctggtggatagagaggaagagacc
ttcctgaagttctttgtcgttgccagagatcgtggacccaatgcgaagagttccaaggtt
ctggtgactatcagtgtcatggaccagaacgacaattctccagctatcgagatccgtggt
attggtttggtaatccaccaggaaggtgtggcaaacatctctgaggacatgccaatcggt
accccggtggcgctggtccaagtgtcggaccgtgacgagggggaaaacgctgtggtgaca
tgtgtggttgctggagacgtaccgtttcagctccgacctgcgagcgagtcagccagcgat
cggaagagaaaatacttcctgcagacaacaaccctgctggattatgaacgcattaaggat
tacaggattgaaatcgttgctgtggattctggaaacccagctctatctagcaccaactcc
ctcaaagtccaggtcacagacataaacgacaacacaccaagtttttctcctccgttgctt
gaagtggactttgcagagggcaaccagccaggtgacaaagtgcttgatgttgtggcctcg
gacgcagacagcagcagcaacgcagagctggtttatagcatcattgagctctcggctgcc
aggctctttgaggttgatgccaacaccggggaggttcgtgtgaagaacatgctggatcga
gaggacaaagagcgttatgagtttcgcgttgcagcagcagacaaaggtgttacaagtaaa
actggaactgctacagtggtggtaaatgttcttgaccgcaatgacaatgatcccaaattc
acactgaatggctacagcttctctgtcatcgagaacatgcctccactaaatcctgtcgga
gtagtaactgttaatgatgctgataagggggagaactcccgagtgacactgtttgtggaa
ccggacaatggaaagttcatcatccagaacggcacaggaaccatcctgtccagcatttca
tttgatcgtgagaaggagagcacctacaccttccgtctaaaagctgtggattctggtgaa
ccccctcgatcctcctttgtaggagtcaccatcaatgtcctggacgagaatgacaatgcc
ccctatgtcaccaaaccttctaactcttccttcatttacctgcagcccgtcacgcctcca
gacacacgaatcgaggtagtgaaggccgaggacatggatgctgggccgaatgctgagttg
ctgtactccatcacgggcggaaacccttatggcctgttccaaatatcacccagcagtggg
gagatcacactgacacagcctttaccggggaagcacaatggcctccaccggctggtggtg
agggtcagcgatcgaggcaaacctcctcgccacaccactacgctggttcacgtctttata
aacgaaaccaaatccaatgtgtccctcattgaggcgctggttggccacagtctctacaca
cctctggacagagacatagcaggggatccggactactcctacagccaacaacgcaataac
tttttgtatgccatccttgcaggcgcttctgttgtgatcctggtaattatagctgtggtg
gttatcagatactggctgcagaaggataccaagagtggttaccaagctggcaagaaggag
agtaaggacctgtatgctcccaaacagggtccaaaaaatggcaaagtgaaaaagaacaag
aaaaacaaagctccaaaacccactaaaccactggaggaggacgaggaggccagtctgcag
aaaggcctcaagtttaacctcatcaatgacgtcaatgacagccccagaatccacctgccc
ctgaattaccccccaggaagtcccgatctgggccgacactaccggtccaactctcccttg
ccatctatccaactgcagccacagtcaccctctgcgtccaagaagcaccaggccgttcag
gacctccctgctaccaacaccttcgtagggacgggcgacaataactccacgggctccgac
caatattcggattacagctacaaggccaatccacccaaatacagcaacaaacagctaccc
caccgacgagtcaccttctccacgtccaatcaggcgcaggatctgcaggacgcctcccag
cacagctactacgacagcggcctggaggagtcggagacccccagctccaagtcgtcatca
gggccgcgaatcggaccgctggctctgccggaggaccactacgagagaaccacacctgac
ggcagcatcggtgagatggaacacccggagaacgacctcaggcctcttcccgacgtggcg
atgactggtaactgcacccgcgagtgcaccgagttcggccactccgactcctgctggatg
cccggacagccttcccctaaccgcaaggtgtccaagagtgcccccaagctctccaccttc
gtgccttaccaggagatggacggacaggaacacctgatggcgaacggcagccccaagccc
atgatggcagaggagcgtgggacgggcggcggcggcgccggtggcagcagctccaaagtg
gccaacatgaggttcatgaccccctacagcagtgcctaccccgggagcggagactcatct
gggaaagactgtggtctggaggaaatccctctgagccaggcagcagagtaccactcagct
accacccccaccggccagacctcaaagagggagatctacctgtga
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