Kryptolebias marmoratus (mangrove rivulus): 108250423
Help
Entry
108250423 CDS
T05608
Symbol
syvn1
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr04120
Ubiquitin mediated proteolysis
kmr04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
108250423 (syvn1)
04120 Ubiquitin mediated proteolysis
108250423 (syvn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
kmr04121
]
108250423 (syvn1)
Enzymes [BR:
kmr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108250423 (syvn1)
Ubiquitin system [BR:
kmr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
108250423 (syvn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-RING_11
zf-RING_5
zf-ANAPC11
zf-RING-like
zf-Nse
FANCL_C
Endonuclease_7
Motif
Other DBs
NCBI-GeneID:
108250423
NCBI-ProteinID:
XP_017295787
UniProt:
A0A3Q3F405
LinkDB
All DBs
Position
LG9:complement(7682621..7696216)
Genome browser
AA seq
633 aa
AA seq
DB search
MVRAALVTATSLALTGAVVVHAYLLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKF
MRKVFFGQLRAAEMEHLIERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA
EDRVDFMERSPNISWVFHLRVLSLLGLLAAMDFLFVNHACHSIITRGASVQLVFGFEYAI
LLTMILTTFIKYILHTVDLQSENPWDNKAVYMLYTELFTGFIKVLLYIAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEDLQASDNVCIICREEMVT
GAKKLPCNHIFHSSCLRSWFQRQQTCPTCRMDVLRATNNNQTQAPAAQAPAPAPAAPANA
PAAAPVPNVAPGMLPGFPPGIFPFWGPFPAVPPPAAAAPAPAPGAADAPQSSTEATQAAG
TSQSASSSTTDTTTSSSAAAAPGSAIPGFPFSFPPPPFPTAPWLPMPPPFVSSMPPPPPS
LSRLSDEELRELEAEGRRGLEARLQCLQNIHTLLDAAMLNIHHYLSTVATLNPPRPESSA
RETSATNHSASSPTAATNTEKDTSISDEASGATVSSQPADSTSCASDTERKENLDEEALE
DEGGEPSAAELRRRRLRKLETASSSSSSPPPDN
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atggtacgagcagccttggtgaccgccaccagtctggcgctgactggagctgtggtggtt
cacgcatacttgctcaaacaccagttctacccgactgtggtgtacctcaccaagagcagc
cccagcatggcggtgttgtacattcaggcatttgtcctggtgtttcttttgggaaagttc
atgaggaaagtcttttttgggcagctgagagctgccgaaatggagcatctgatcgagcgc
tcctggtacgcggtgacggagacgtgcctggccttcactgtgttcagagacgatttctcc
cctcgattcgtcgccctcttcaccctcctgctcttcctgaagtgcttccactggctggcg
gaggatcgggtggactttatggagcggagtccaaacatatcgtgggtttttcacttaaga
gttttatctctcctgggactgctggcagccatggactttttgtttgtcaaccacgcctgt
cacagcatcatcactcgaggagcttcagttcagcttgtttttggatttgagtatgccatc
ttgctgaccatgatcctgacgaccttcatcaagtatattttgcacactgttgacctgcag
agtgagaatccctgggacaacaaggccgtctatatgctctacacagagctcttcacaggt
tttatcaaagttctcctgtacattgccttcatgaccatcatgataaaggtccacaccttc
cctctgtttgccatccgccccatgtatctggctatgaggcagtttaagaaggctgtaaca
gatgctataatgtctcggagagctatccgcaacatgaacacactatatcctgatgctact
cctgaagatctgcaggcctcggacaatgtctgcatcatctgtcgagaggaaatggtcacc
ggagccaagaaactgccttgtaatcacattttccactccagctgcctgcgctcctggttc
cagaggcagcagacgtgcccgacctgtcgtatggacgtcctcagagccaccaacaacaat
cagactcaggctccagcggcacaggctccggcccctgcccccgcggcccccgccaatgct
ccagcagcagccccggtcccaaacgtggctccgggcatgttgccaggctttcctccgggc
atcttccctttctggggtccttttcctgcagtgccgcctcctgctgcagcggctccagcc
ccagctccgggtgctgccgacgctccacagagcagcacagaggcaacgcaggcagctggc
accagtcagtctgcatcttcttctactacagacacaaccacatcatcttcagcagcagca
gctccaggatcagcaatcccaggattccccttctccttcccacctcctcccttccccact
gcaccatggctgcccatgcctccgcccttcgtgtcatcaatgcctccccctcctccgtct
ctgtctcggctgtcggacgaggagctgagggagctggaggcagaaggtcggcgaggcctg
gaggccaggctgcagtgtctccagaacatccacaccctgctggacgccgcaatgctcaat
atccaccactacctcagcactgtcgctacgctcaatccgcctcggcctgagagcagtgct
agagaaaccagtgcaacaaaccacagtgcttcgtctcctacagctgccactaacacagag
aaggacacgtccatctctgatgaggcgagcggagccacggtctcctctcagcccgccgac
tccacttcctgtgcttcggacacagaaaggaaagagaacctggacgaagaagcgctggag
gatgagggcggcgagccgagcgccgccgagctgaggcggcgccgtcttcgcaagctcgag
acggcgtcgtcctcgtcgtcgtcccctcccccggacaactga
DBGET
integrated database retrieval system
