Kryptolebias marmoratus (mangrove rivulus): 108250534
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Entry
108250534 CDS
T05608
Name
(RefSeq) tripartite motif-containing protein 54-like isoform X1
KO
K10654
tripartite motif-containing protein 55
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
108250534
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
kmr04121
]
108250534
Ubiquitin system [BR:
kmr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
108250534
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
RING_XB3-XBAT31
zf-RING_5
zf-C3HC4_4
zf-C3HC4_3
zf-RING_6
zf-RING_2
Exonuc_VII_L
ADK_lid
DUF7605
MRP-S23
Motif
Other DBs
NCBI-GeneID:
108250534
NCBI-ProteinID:
XP_017295944
UniProt:
A0A3Q3AAF2
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All DBs
Position
LG8:3697173..3748950
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AA seq
505 aa
AA seq
DB search
MSLSADLRCLQASQGAEREAVLTQLEKQLMCPICQEIFNKPVVILPCQHNLCRKCANELY
KPSLFHARTTMLVNSGHFRCPSCRREVVLDRHGVYGLQRNLLVENIIDVYNQEINSVPSP
LSPSQTQATCSDHEGEKLNIYCLTCQLPTCSLCKVFGDHQSCLVVPLADIYQQQKDELSE
VVTSLVAFSDRVQSVINKLEEMHRKIEENYTTQKQSVCDKFNQMFSILEDKRKIMTQEIS
SEEEQNINRTQMLVHCCGNIMEANRKLLENAESSMEELDMAAFVENSRVLITRVMAATSS
CPSETLKPNLENMSTYKFNFSRQERALKNIDFIKVVEDVPEELEVSPEPEEPKYIFIQST
ELEQCQEPSVKNLDVAVEPTQMWISAPVSSPLKPVQIMEQKVAQVLSVPPLERDTIESEW
ELVQLDTYEPGLNDEEPAFFNVEKEKEREETHKTKKAPYPMKEENRSDDQEGMSMQQAVM
LFFYLLAFLVILQRIWAYIGCFFCT
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgtcagcagacctgagatgtctgcaggccagccagggagcagaacgggaggca
gtgctcacacagctagagaaacagctgatgtgtcccatctgccaggagatctttaacaag
ccagtggtcatcctgccgtgccaacacaacctctgcaggaagtgtgctaatgagctttac
aagccgtctctgttccatgctcgaaccacaatgctggtgaatagtggccatttcagatgt
ccttcctgcagacgtgaagtggtgctggatcgtcatggtgtctacggtctgcaaagaaac
ctgctggtagagaatattattgatgtttacaaccaggaaatcaacagtgttccaagcccg
ctctctccttctcaaacgcaggcaacatgttctgaccacgaaggtgaaaagctgaacatc
tactgcctcacctgtcagcttcctacatgttctctctgcaaagtgtttggggatcatcag
tcctgtctggtggttcctctggcagacatctatcagcagcagaaggatgaactaagtgaa
gttgtaacttccctggtggccttcagtgacagagtccagtctgttatcaacaagctggag
gaaatgcatagaaagatagaggagaactatacaactcagaaacagagtgtgtgtgacaaa
ttcaaccagatgttttctattctggaggacaaacgcaagataatgacccaagaaatcagc
tctgaggaggaacaaaacataaatcgaacccagatgttagttcattgctgtggtaacatc
atggaggccaacaggaaattgctggagaacgcagagagcagcatggaagagctggacatg
gctgcttttgttgagaattcacgagtgctgataacaagagtgatggcagctaccagctcc
tgtccatcagagacactgaaaccaaatttagaaaatatgagcacctacaaatttaacttt
agcagacaagagagagctctaaaaaacatagatttcatcaaggttgtagaggatgttcct
gaagaactagaggtcagtccagagccagaagaacccaaatatatttttatccagagcaca
gaactggaacagtgtcaagaaccttcagtaaagaacctggatgttgctgtggaaccaact
cagatgtggatttcagccccagtatcttcaccactgaaaccagtacaaataatggaacaa
aaagtagcacaagtactttcagttccacctctagagagagacactatagagtctgagtgg
gaacttgtgcagctagacacttatgagccaggcttaaatgatgaagaaccagcttttttt
aatgtggaaaaggaaaaagagagggaggagacacataaaacaaagaaggcaccatatccc
atgaaagaggagaacagaagtgatgaccaggaaggaatgagcatgcagcaggctgtcatg
ctgttcttctatctgctggccttcctggtcatcctacagagaatctgggcttacattggc
tgtttcttttgcacataa
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