Kryptolebias marmoratus (mangrove rivulus): 108250551
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Entry
108250551 CDS
T05608
Symbol
vldlr
Name
(RefSeq) very low-density lipoprotein receptor isoform X1
KO
K20053
very low-density lipoprotein receptor
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
kmr04131
]
108250551 (vldlr)
Membrane trafficking [BR:
kmr04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
108250551 (vldlr)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
SGL
EGF
Motif
Other DBs
NCBI-GeneID:
108250551
NCBI-ProteinID:
XP_017295978
UniProt:
A0A3Q3ABG3
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Position
LG14:complement(25607703..25631331)
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AA seq
840 aa
AA seq
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MVSSTPGILLLLMCLQHCGTGHGTKTECEASQFQCGNGRCIPSVWQCDGDEDCTDGSDES
ACVKKTCAEVDFVCRSGQCVPKRWHCDGEPDCEDGSDESLEICHMRTCRVNEFSCGPGTT
QCIPFFWKCDGEKDCDNGEDEVDCGNVTCALNEFTCASGRCISRNFVCNGEDDCGDGSDE
LDCAPSSCGPSEFQCGNSSCIPASWVCDDDVDCQDESDESPTRCGRHPTPPAKCSPSEMQ
CASGECIHKKWRCDGDPDCKDGSDEANCPFRTCEEDQFKCDSGGCVPGNRQCNGVRDCAD
GSDEASCRNVTQCNGPEKFKCRSGECIEMSKVCNKIRDCPDWSDEPLKECNLNECLLNNG
GCSHICKDMAIGFECDCTPGLQLLDHKTCGDINECMNPGICSQICINLKGGYKCECHNGY
QMDPTTSVCKAVGKEPCLIFTNRRDVRRLGLERKEYTQMVEQQRNVVALDADFKQQTLFW
ADLGQKAIFSTVLDKRDAGAHKKVIDVQSPVGVAVDWIYKNLYWSDLGTRTISVANFNGT
KQKVLFSRGLKEPASIAVDPLSGFLYWSDWGEPAKIEKSGMNGVDRQVLVATDIQWPNGI
TLDLIKGRLYWVDSKLHLLCSVDLNGDNRKKVLQSADVLAHPFALTVFEDRVFWTDGENQ
AIYGANKFSGSDVVTLASNLNAPQDVIVYHELIQLSGTNWCAEKGENGGCSYLCLPAPQI
NKHSPKYTCVCPEGQELAADGLRCRPEANVSTSIQVDSAARGSAAAWAVLPVLLLAMAGA
GGYLVWRNWQLRNQKSMNFDNPVYLKTTEEDLNIDITRHGANVGHTYPAISIVSTEDDLS
NT seq
2523 nt
NT seq
+upstream
nt +downstream
nt
atggtgtcgtccacaccggggatcctgctgctgctaatgtgtctccagcactgcggtacc
ggccacggcacaaagacggaatgtgaagccagccagttccagtgcgggaacggccgctgc
atcccgtccgtctggcagtgcgacggagacgaggactgcaccgacggcagcgacgagagc
gcctgcgtgaagaagacgtgcgccgaggtggacttcgtgtgtcgcagcggtcagtgcgtc
ccgaagcgatggcactgcgacggcgagccggactgcgaggacggctccgacgagagcttg
gagatctgccacatgaggacgtgccgcgtgaacgagttcagctgcggcccgggaaccact
cagtgcatccccttcttctggaagtgtgacggagaaaaggactgcgacaacggcgaggac
gaggtcgactgcggtaacgtcacctgtgcgctgaacgagttcacgtgcgccagcggccgc
tgcatctcccgcaacttcgtgtgcaacggcgaggacgactgcggcgacggctcggacgag
ctggactgcgccccgtcctcctgcggccccagcgagttccagtgtgggaactcgtcgtgc
atcccggccagctgggtctgcgacgacgacgtggactgccaggacgagtcggacgagtct
ccgactcgctgcggccgccacccgacgccgccggcgaagtgttcgcccagcgagatgcag
tgcgcctcgggggagtgtatccacaagaagtggaggtgcgacggagaccctgactgcaag
gacggcagcgacgaggccaactgtccgttccgtacctgcgaggaggaccagtttaagtgc
gactccggcggctgcgtcccggggaacagacagtgtaacggcgtcagggactgcgccgac
ggatcggacgaagccagctgcagaaacgtgactcagtgcaacgggccggagaagttcaag
tgtcgcagcggcgagtgcatcgagatgagcaaagtgtgcaacaagatccgagactgtccg
gactggagcgacgagccgctgaaggagtgcaatctgaacgagtgtctcctgaacaacggc
ggctgctctcacatctgtaaggacatggcgatcggcttcgagtgcgactgcacgcccggc
ctgcagctcctcgaccacaagacctgcggagacatcaacgagtgcatgaatcctggcatc
tgcagtcagatctgcatcaacctgaagggcggctataagtgcgaatgtcacaacggctac
cagatggatccgaccaccagcgtgtgcaaggctgtggggaaggagccgtgcctgatcttc
accaaccggcgtgacgtccggcgcctgggcctggagaggaaggagtacacgcagatggtg
gagcagcagaggaacgtggtggcactggacgcagacttcaagcagcagacgctgttctgg
gccgacctgggtcagaaggccatattcagcacggttctggacaaacgggacgccggcgcc
cataagaaggtgatagatgtccagtcgccggtcggggtcgctgtggactggatctacaag
aacctgtactggtccgacctcggaaccaggaccatttctgtcgccaacttcaacgggacc
aagcagaaggttctgttcagcagaggcctgaaggagcccgcgtccatcgctgtggatccc
ctgtccgggttcctgtactggtccgactggggcgagccggcgaagatcgagaagtctggc
atgaacggagtggaccggcaggttctggtggcgaccgacatccagtggcccaatgggatc
acactcgatctgatcaaaggtcggctctactgggttgactcgaagctccacctcctctgc
agcgtcgacctgaacggagacaacaggaagaaggtccttcagtccgcagacgtcctcgct
caccccttcgctctcacagtctttgaggaccgggtcttctggacggacggggagaaccag
gcgatctacggcgccaacaagttcagcggttctgacgtggtgacgctggccagcaacctg
aacgccccgcaggacgtcatcgtgtaccacgagctgatccagctgtccggaacgaactgg
tgcgcagaaaagggcgaaaatggcggctgcagctacttgtgcctgcccgctccacagatc
aacaaacactcccccaaatacacctgcgtgtgtccggagggccaggagctggcggccgac
gggctgcgctgccgacccgaggccaacgtcagcacctccatccaggtggactcggcggcc
cgaggttctgccgccgcctgggcggttctgcccgtcctgctgctggcgatggcgggcgcc
ggaggctacctggtgtggaggaactggcagctgaggaaccagaagagcatgaacttcgac
aaccccgtctacctgaaaaccaccgaagaagacctgaacatcgacatcacccgacacggc
gccaacgtgggacacacctaccccgcgatctctatcgtgagcacagaggatgatttatcc
tga
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