Kryptolebias marmoratus (mangrove rivulus): 108250562
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Entry
108250562 CDS
T05608
Symbol
tnpo3
Name
(RefSeq) transportin-3
KO
K15436
transportin-3
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr03013
Nucleocytoplasmic transport
kmr03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108250562 (tnpo3)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
108250562 (tnpo3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
kmr03016
]
108250562 (tnpo3)
Transfer RNA biogenesis [BR:
kmr03016
]
Eukaryotic type
tRNA transport factors
tRNA import factors
108250562 (tnpo3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_TNPO3_IPO13_4th
TPR_TNPO3_IPO13_3rd
TPR_TNPO3_IPO13_2nd
Xpo1
IBN_N
KAP122_middle
Motif
Other DBs
NCBI-GeneID:
108250562
NCBI-ProteinID:
XP_017295996
UniProt:
A0A3Q3AD46
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All DBs
Position
LG18:20936077..20949219
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AA seq
923 aa
AA seq
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MEGGKPSLALVYQAVQALYHDPDPAGKERASLWLGELQRSMFAWEISDQLLQLKQDVESC
YFAAQTMKMKIQMSFYELPPETHNALRDSLLTHIQNLKDLSPIIVTQLALAIADLALQMA
SWKGCVHTLIEKYNNDISSMPFLIEILTVLPEEVHSRSLRIGANRRTEIIEDLAFYSTTM
VTLLTSCVEKTGTDEKMLIKVFRCLGSWFNLGVLDSNFMASNQLLMVLFQILQRDETSTN
LHEAASDCVCSALYAIENVDTNIPLALQLFQGVLTLETAYHMAVAREDLDKVLNYCRIFT
ELCETFLETTVRSPGQGMGDLRTLELLLICAGHPQYEVVEISFNFWYRLGEHLYKINDAN
LHSIFRPYIQRLLHCLARHCQLDPDHEGIPEETDDFGEFRMRVSDLVKDVIFLVGSMECF
SQLYSTLKDGNPPWEVTEAVLFIMASIAKSVDPENNPTVAEVLQQVVLLPESVHMAVRYT
SIELVGEMSDVVDRNPRFLDPVLNYLMKGLREKPLASAAAKAIHNICSVCRDHMAQHFQG
LLDIARSLDSFALSTEAAVGLLKGTALVLARLPLEKIAECLSDLCAVQVMALKKLLSEQS
ANGKSADPTVWLDRLAVIFRHTNPIVENGQTHPCQKVIQEIWPVLSETLNAHQADNRIVE
RCCRCLRFAVRCVGKGSASLLQPLVTQMVNVYQVYPHSCFLYLGSILVDEYGMEEGCRQG
LLDMLQALCMPTFQLLEQPNSLRNHPDTVDDLFRLATRFVQRSPVTLLSSSIVIHIIQCA
IAATSLDHRDANCSVMKFIRDLIHTGVSNDHEEDFEVRKRLIGQAMEQHGQQLISQLVHS
CCFCLPPYTLPDVAEVLWEVMLFDRPIFCRWLENALKSLPKETSGGAVTVTHRQLTDFHK
QVTSAEECKQVCWAIREFTRLFR
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atggagggcggtaaaccgagcctggcgctggtctaccaggcggtccaggccctgtaccac
gacccggacccggctgggaaggaacgagcctcgctttggctcggagagctccagagatcg
atgtttgcctgggagatctcagaccagctcctgcagctcaaacaggatgtcgagtcatgt
tattttgctgctcagacaatgaagatgaagatccagatgtccttctacgagcttccacct
gagacccacaatgcactgcgagactccctgctgacccacatccaaaacctcaaagacctg
tcgcccatcattgtcacacagctggcgctagcgatcgctgatctcgctcttcagatggcc
tcatggaaaggatgtgttcacacgctcatagaaaagtacaacaatgacatcagttcaatg
ccattcctcatagagattctgacagttttaccggaggaagttcacagccgatctctgagg
atcggagctaatcggaggacagaaatcatcgaggacctggcattttactccaccaccatg
gtcacactgctgacgtcctgcgtggagaagactgggactgatgagaaaatgctcatcaaa
gtgtttcggtgtctcggcagctggttcaacctgggagtcctggacagtaacttcatggcc
agtaatcagctgctgatggtcctcttccaaatcctgcaaagggatgaaacctcaactaat
ttacatgaagcagcatcggactgtgtctgctcagctctctacgccatagagaacgtggac
accaacatacctttggctttgcagctcttccagggtgtcctgacgctggagacggcctat
cacatggctgtggctcgagaagacctggacaaggtgctgaactactgcaggatctttact
gagctctgtgagacatttctagaaaccacagtcaggagtccaggtcagggtatgggagac
ctgaggacactggagctgctgctgatctgtgcaggacacccacagtacgaggttgtggag
atttcttttaacttctggtatcgtctgggagaacatctgtataaaataaacgatgcaaac
cttcacagcatcttcagaccgtacatacagagactgctccactgtttggcccgacactgc
cagcttgatccagaccatgaaggaatcccagaggaaacagacgactttggggagttcagg
atgagagtgtcagatctcgttaaagatgttatttttcttgttggatccatggagtgcttc
tcccagttgtattccactttaaaagatgggaaccccccctgggaggtgacagaggctgtt
ctttttatcatggcttccattgctaaaagtgttgacccagaaaacaaccccactgtggca
gaggttcttcagcaggttgtcttacttcctgagagtgtccacatggcagttcggtacact
agcatcgagctggttggagagatgagcgatgtcgtggacagaaacccgagattcctggac
ccagtgttgaactacctgatgaaaggtctcagagagaaacctctggcgtctgcagcagcg
aaggcgatccacaacatctgttcagtgtgcagggatcacatggctcaacacttccagggc
cttctggacattgctcgctcccttgactctttcgctctgtccacggaggctgctgtcgga
ctgctgaaaggtacggctctggtcctggctcgtcttcctctggagaagatcgcagaatgt
cttagtgatctttgtgctgttcaggtgatggctctgaaaaagcttctgtcagaacaatct
gcaaacggtaaatcagctgatccgactgtgtggctcgacagactagctgttatcttcaga
cacacaaaccccatcgtagagaacggacagacacatccctgtcagaaggtcatccaggag
atctggccggtgctgtcagagacactgaacgctcaccaggccgataaccggattgtggag
cggtgctgccgctgcctccgcttcgctgtgcgatgcgtcggaaaagggtccgcctccctt
ctgcagcctctcgtcactcagatggtgaatgtgtaccaggtgtatccacactcttgcttc
ctgtacctgggcagcatcctggtggatgagtatggcatggaggagggctgcaggcaggga
ctgcttgacatgctgcaggctctgtgcatgccaactttccagctgctggagcagcctaac
agcctgagaaaccatcctgacacggtggacgacctgttcagactggccacaagattcgtc
cagaggagtcctgtcactttactgagcagcagcatcgtcattcatatcattcagtgcgcc
atcgccgccacctcattggaccacagagacgccaactgcagtgtcatgaagttcatccgt
gacctaatccacactggagtctccaatgatcacgaggaggactttgaggtgcggaagcgg
ctgattggtcaggccatggagcagcacggtcagcagctcatcagtcagctggtgcactcg
tgttgtttctgcctgccgccgtacacgctgccggacgtcgccgaggttctgtgggaggtc
atgctgttcgacaggcctatattttgccgctggttggaaaatgctctaaaaagtttacca
aaggagacatcaggaggagccgtgacggtcactcacaggcagctgaccgacttccataaa
caggtcaccagtgctgaggagtgtaaacaggtgtgttgggccatcagagagttcaccaga
ctatttcgatag
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