Kryptolebias marmoratus (mangrove rivulus): 108250589
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Entry
108250589 CDS
T05608
Name
(RefSeq) protocadherin-20
KO
K16498
protocadherin delta 1
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
108250589
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
kmr01009
]
108250589
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
kmr04515
]
108250589
Protein phosphatases and associated proteins [BR:
kmr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
108250589
Cell adhesion molecules [BR:
kmr04515
]
Cadherins
Protocadherins
108250589
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
DUF6899
TM_ErbB1
Motif
Other DBs
NCBI-GeneID:
108250589
NCBI-ProteinID:
XP_017296031
UniProt:
A0A3Q3BJ74
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All DBs
Position
LG15:2984974..2988614
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AA seq
887 aa
AA seq
DB search
MSNSRQLSQKGRIWGFCILLLSTTPLSCLANFSQAKELIYKIKEGLPKGTFIGAIGVDLH
LDFTVDPPFLFSLSQKKVSEQYVDLNNTTGELFTSATEIDRETLCPYSSEGQACVLSLDV
IVLPQQYFQLVKVKISIEDVNDSRPKFPTDEICMSIPENAQINARYAVEQSAVDPDFGIY
GVQTYWLVNDFGVFTLDVEENEGGELTPFLIVTESLDRETQEEYITDIIAEDGGTPPLLG
AATLKIVITDVNDNCPKFTESQINVTLHGNSTKGKPLARLHAFDSDLGANAQISYAYSDR
VPRDTRSLFHLDKLTGAIKLARNIDTVTATFYKLTVLANGPGCIPAVATVTVHIIKVVTG
PPAVVPRYIATEKDGVVTIKESEPAFSPIAFFTVKNIGKNQRVDCYLEGSGPFRLVPYQG
LKNEYLLETTEALDYEKTQDYELILAANNTQGIVTKTFLKVQVLDENDNAPVFQQSLVEI
SLEENNPPNTFLTQFQASDEDGGIQGEVFYLLGGDAPGIFVVDRVTGVLTVTTSLDREEK
EKYRFIVRAVDQGTPRRESIATVVLTVEDRNDNSPRFINKDFTFFVPENFPGFGEIGVLS
VTDADAGENGWIALSILNGSDIFMIDTGRGALRARTSLDREQQGTYQLWIEAVDGGEPAL
SSVTMVTVLLLDVNDNPPVVLFPQSNQSYMLVLPDTTPGTSITEVYAVDKDTGMNAVIAY
SIIKRKGGEPGSFAIDPETGNITLKRELNNRGLYSLLVKVSDHGQPEPLYSTVMVNFFVN
ETVSNESYIQSLLTREADIEVEEKPWFVGQMKDGPERYELIPCRLILIVLSVTCLGLFFL
VVVLTSYICCKRYKKIRKKTSDVEVPLKNKNDSGHFLNRKLRQISNI
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacagcagacaacttagccaaaaaggaagaatatggggattctgcattctcttg
ctgtccaccacccccctttcctgtctggcaaatttcagtcaagcaaaagagctcatctat
aagataaaggagggattaccaaaagggactttcatcggggctattggagtagacttacat
ttggatttcacagttgatcccccctttttattcagtctttcgcaaaagaaggtcagtgaa
caatatgtggacctaaataacaccaccggggagcttttcacgtctgccactgagatcgac
agggagaccctctgtccttacagctcggagggacaggcatgcgtcctctcgctggatgtg
attgtgttgcctcagcagtactttcagctcgtcaaagttaagatctcgattgaggacgtg
aacgacagcaggcccaagttcccaacagatgaaatctgtatgtccatcccggaaaacgcg
caaatcaacgctcgctacgcggtggagcagtccgccgtcgacccagactttggtatttac
ggagttcagacttactggctggttaatgactttggtgtgttcacactggacgttgaggag
aatgaaggcggcgagctgacaccgttccttattgtgacagagagtttggacagagagaca
caggaagaatacatcacggatattatagcagaggacggagggacccctcccctacttgga
gcggctactttaaaaattgtcatcacagatgtgaacgacaactgccccaaatttacagag
tcacaaattaatgtgactctgcatggaaattccaccaaagggaaacctttggcacggctt
catgcttttgactctgaccttggagctaatgctcagatcagctatgcttacagtgaccgg
gtgccgagggatacccgcagcttgttccatttggacaaactcacaggagcgatcaagcta
gcccgaaacatagacacggtcacagccacgttttacaaactcaccgttctggccaacggt
cccggttgtatccccgcggttgcaactgtaactgtccacatcatcaaagtggttacagga
ccccctgctgtcgtacctcggtacattgcaacagaaaaggacggcgtggtgacaataaag
gagtctgagccagctttctctccgatcgcttttttcaccgttaaaaacattggcaagaac
caaagggtggattgttacttggaagggtctggtcccttccggctcgtcccttaccaagga
ctcaaaaacgaatacctcctagaaactacagaggccttggactacgagaagacacaggat
tatgagctaattttggcggctaacaatactcaaggaatagtcaccaaaacatttctgaag
gtgcaggttttggatgagaacgacaacgctcctgtgtttcagcagtctttggtggaaata
tcgcttgaagaaaataatccaccaaacacttttctaacccagttccaagcctccgacgag
gacggcggaattcaaggggaagtgttttacctcctcggaggtgatgcccctgggattttt
gttgtggatcgggtcacaggtgtcctgactgtgaccacatcgcttgaccgtgaggaaaaa
gagaaataccggtttatagttagagcagtggaccaggggacgccgcggagggagtcaatt
gcaacagtggtgttgacagtggaagatcgcaatgacaacagtccacgtttcatcaataag
gacttcactttcttcgtgcctgagaacttcccagggtttggtgagatcggtgtcctgtct
gtaacagatgctgatgctggagaaaatggctggatagccctgtccatcctcaacggcagt
gacatctttatgatagacacgggtcgaggagctctaagggccaggacatcgctggaccgt
gagcagcaagggacgtaccagctgtggattgaggctgtcgatggtggggaacctgcgctt
tcctctgttactatggtcaccgtgctgctgttggatgtaaacgataatccgccagtcgtc
ctcttccctcagtctaaccagtcttacatgctagtgctgcctgatacaacacctggaaca
tcaatcacagaggtgtacgctgtggacaaagacacaggcatgaatgctgtgattgcatat
agtatcattaaaaggaaaggcggagagccgggttcgtttgccatcgaccctgaaacagga
aatatcacattaaagagggagctcaacaacaggggcctttacagccttctggtgaaggtc
agcgatcacggccaacctgagccgctttactccacagtcatggtaaacttcttcgtcaat
gaaaccgtgagtaacgagagctacatccaaagcctgctgaccagagaggcagacatcgag
gtggaggagaagccctggttcgttggccagatgaaggatggacccgagaggtacgagctg
atcccctgtcggctcatcctcatcgttctttcagtgacgtgtctgggactgttcttcctg
gttgtcgttctgacatcttacatatgctgcaagaggtataagaagatcaggaagaaaacg
tcagatgtggaagtacctttaaaaaataaaaatgactcgggacactttctaaacagaaag
ctcaggcagatctccaacatctga
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