Kryptolebias marmoratus (mangrove rivulus): 108250671
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Entry
108250671 CDS
T05608
Symbol
cltca
Name
(RefSeq) clathrin, heavy chain a (Hc) isoform X1
KO
K04646
clathrin heavy chain
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr04142
Lysosome
kmr04144
Endocytosis
kmr05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108250671 (cltca)
04142 Lysosome
108250671 (cltca)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
108250671 (cltca)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
kmr04131
]
108250671 (cltca)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
kmr04147
]
108250671 (cltca)
Membrane trafficking [BR:
kmr04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
108250671 (cltca)
Exosome [BR:
kmr04147
]
Exosomal proteins
Proteins found in most exosomes
108250671 (cltca)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_Vps41
Motif
Other DBs
NCBI-GeneID:
108250671
NCBI-ProteinID:
XP_017296151
LinkDB
All DBs
Position
LG13:20914630..20947552
Genome browser
AA seq
1679 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVIIDMADPNT
PIRRPISADSAIMNPASKVIALKDAAKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTV
ALVTDNAVYHWSMEGDSQPVKVFDRHSSLAGCQIINYRTDAKQKWLLLIGISAQQNRVVG
AMQLYSVDRKVSQPIEGHAASFAQFKIEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTG
NQPFAKKAVDVFFPPEAQNDFPVAMQISAKNNVVFLITKYGYIHLYDLETGTCIYMNRIS
GETIFVTAPHEATSGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRLAVRNNLAG
AEELFARKFNNLFAAGNYSEAAKVAANAPKGILRTPDTIRRFQSVPTQPGQTSPLLQYFG
ILLDQGQLNKYESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKAVDPTLALSVY
LRANVPNKVIQCFAETGQFPKIVLYAKKVGYTPDWIFLLRNVMRINPEQGLQFAQMLVQD
EEPLADITQIVDVFMEYNLIQQCTSFLLDALKNNRPSEGPLQTRLLEMNLMHAPQVADAI
LGNQMFTNYDRAHIAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNYFGSLS
VEDSMECLRAMLSANIRQNLQICVQVASKYHEQLTTQALTEIFESFKSFEGLFYFLGSIV
NFSQDPEVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCD
RFDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVVGGLLDVDCTEDVIKSLILVVRGQ
FSTDELVAEVEKRNRLKLLLPWLESRIHEGCEEPATHNALAKIYIDSNNNPERFLRENPY
YDSRVVGKYCEKRDPHLACVAYERGQCDQELINVCNENSLFKSLSRYLVRRKDPELWASV
LLESNPFRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFS
EHRNLQNLLILTAIKADHTRVMEYISRLDNYDAPDIANIAISNELYEEAFAIFKKFDVNT
SAVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKELVKEAIDSYIKADDPSAYME
VVQAADKSGNWEDLVKFLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQ
QVGDRCYDEKMYEAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFA
CVDGQEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTE
LAILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEFDNAIITMM
NHPTDAWKEGQFKDIITKVANVELYYKAVQFYLEFKPLLLNDLLMVLSPRLDHSRAVNYF
SKVKQLPLVKPYLRSVQNHNNKSVNEALNNLFITEEDYQALRTSIDAYDNFDNILLAQRM
EKHELIEFRRIAAYLFKGNNRWKQSVELCKKDKLYKDAMQYASESKDTELAEELLAWFLQ
ENKKECFAACLFACYDLLRPDVVLETAWRHNIMDFSMPYFIQVMREYLSKVDKLETSESV
RKEEEQATETQPIVYGTPQLMLTAGPSVPVTPQQPYGYGYQAPAGFAPPAVQPGFGYGM
NT seq
5040 nt
NT seq
+upstream
nt +downstream
nt
atggctcagatccttcccattcgctttcaggagcacctgcagctccaaaacttgggaatc
aatccggccaacataggcttcagcaccctaaccatggagtctgataagttcatctgtatc
cgggaaaaagtgggcgaacaagctcaggtggtgatcattgacatggccgaccctaatact
cccatccgcaggcccatctcagctgacagcgccatcatgaatccagccagcaaagtcatt
gcacttaaagacgcggccaaaactcttcagatctttaacattgagatgaagagcaagatg
aaggcgcacaccatgacagacgatgttactttctggaagtggatctccctaaacacagtt
gctcttgtgactgacaatgctgtgtaccattggagcatggagggtgactcacagcctgtg
aaagtttttgaccgtcactccagccttgcaggatgtcagatcatcaactaccgaactgac
gccaagcaaaaatggctcctccttattggtatctcagctcagcaaaatagggtggtggga
gccatgcagctgtactctgtggacaggaaggtttctcagcccattgaaggccatgctgcc
agctttgcccagtttaagattgagggtaatgcagaggaatcaacactgttctgctttgct
gtcagaggccaggctggaggaaagctgcacatcattgaagtggggacaccaccaactggt
aaccagccgtttgcaaagaaagcagtagatgttttctttcctccagaagcccagaatgac
ttccctgtggccatgcagataagcgcaaagaacaatgtggttttccttattaccaagtat
ggctacatccacctgtacgatctggagacaggaacctgcatctacatgaaccgcatcagt
ggagagacgatctttgtcactgctccacatgaggccacctcaggcattattggggtcaac
aggaagggacaggtgctgtctgtctgtgtggaggaggaaaatatcattccatacatcacc
aacgtattacagaatccagatcttgctctccgcttagctgttcgcaacaaccttgcagga
gctgaggagctcttcgctcgcaagttcaacaacttgtttgctgctggcaactactccgaa
gctgccaaagttgctgctaatgcaccaaagggaatcctgcgcaccccagacaccattcgg
cgcttccagagtgttcccactcagcctggccagacctcgcccttgctccagtactttggt
atcctgttagaccagggccaactcaacaagtatgagtctcttgagctttgcaggcctgtc
ctccagcagggacgaaagcagcttctggagaagtggctgaaggaggacaagttggagtgt
tcagaggaactgggtgatctggtgaaggcagtggatcccaccttagctctcagtgtctac
ctgagagccaacgttcccaacaaagtcattcagtgctttgcagaaacaggacagttcccc
aagattgtcctgtatgctaagaaggtgggctacaccccagactggatctttctgcttagg
aatgtgatgcggatcaacccagaacaaggcctgcagtttgcacagatgctggtccaggat
gaagagccactggcagacatcacacagattgtggatgtattcatggagtacaacctgatc
cagcagtgcacctcttttctccttgatgctctaaagaacaacaggccctcagaggggcca
ctacagacccgtctcttggagatgaacctcatgcatgccccacaggttgctgatgctatc
ctgggcaaccaaatgttcaccaactatgatcgtgcccacattgcccagctgtgtgagaag
gctggactccttcaaagagcactggagcactacacagacctgtatgacatcaagcgtgct
gtggtgcacacacaccttctcaacccagagtggctggtgaactacttcggctcactgtca
gtagaagactcaatggaatgcctcagggccatgctctcagccaacatccgtcagaacctg
cagatctgtgtccaggtggcttccaagtaccatgaacagctgaccacacaagctctcact
gaaatatttgagtccttcaagagctttgaagggttgttctacttcctgggctctattgtg
aacttcagtcaggatcctgaagttcacttcaaatacattcaggctgcctgcaagacaggc
cagatcaaagaagtggagaggatctgcagagagagcaactgctacgaccctgagcgagtc
aagaacttcctcaaagaagccaaactcaccgaccaactgcccctcatcattgtttgtgat
cgttttgatttcgtccatgacctggtcctctacctgtaccgcaacaacctgcagaagtac
attgagatttatgttcagaaggtgaatcctagtcgtctgcctgttgtagtcggtggtctc
ttggatgtggactgcactgaggatgtcatcaagagtctgatcttagttgtcagagggcag
ttctctactgatgaactggttgccgaggtggaaaagaggaacaggctgaagctgttgctg
ccctggctggagtctcgcatccatgaaggctgtgaagaacctgctacccacaatgccctg
gcaaagatctacattgacagcaacaacaaccctgaacgcttcctgcgggaaaatccttac
tatgacagtcgagtggtgggaaagtactgcgagaagagagaccctcatctggcctgcgtg
gcctacgagcgtggacagtgcgaccaggaactaatcaatgtttgcaatgagaactccctc
ttcaagagcttgtctcgctatctagtccgacgcaaggatcctgagctgtgggccagtgtc
ctgctcgagagcaatcccttcaggcgaccactcattgatcaggtggtgcaaacagcactg
tcagaaactcaagatccagaggaggtatccgtcactgtcaaagctttcatgactgctgac
ttgcccaatgagctcattgagctgttggagaagattgtgttggacaactcagtcttcagt
gaacacagaaatctgcagaacttgctgatcttgacagcaatcaaagctgaccacactcgg
gtgatggagtacatcagcagactggacaattatgacgctcctgatattgctaacatcgcc
atcagcaatgagctctatgaggaggcctttgccatctttaaaaagtttgacgtcaacacc
tctgctgtgcaggtgctaattgagcatattggtaacctggaccgggcctatgagtttgca
gaacgctgcaatgaaccagctgtgtggagccagctggccaaggctcagctacagaaagag
ctggtcaaggaagctattgactcctacatcaaagctgatgacccctctgcatacatggag
gtggtgcaggcagctgataagagtggaaactgggaggacttggtcaagttcctccagatg
gctcgtaagaaggctcgtgaatcctatgtggagacggagctgatctttgctttggccaaa
accaatcgcctggctgaactggaagagtttattaatggacccaacaatgctcacatccaa
caggttggtgaccgttgctatgacgaaaaaatgtacgaagcagctaaactgctgtacaac
aatgtctccaactttggtcgactggcttccactctggtgcaccttggagagtaccaggct
gctgtagatggcgcccgtaaagccaacagcacccgcacctggaaggaggtgtgcttcgca
tgtgtggatgggcaggagttcagactcgcccagatgtgcggtctccacatagtggttcac
gctgatgagctggaggagctgatcaactattatcaagaccgcggctactttgaggagttg
atcaccatgctggaggccgctctgggcctggagcgggctcacatgggaatgttcacggag
ttggccatcctttactccaagttcaaaccccagaagatgagggagcacctggagctcttc
tggtccagagttaacatcccaaaggtcctgcgggcagcagagcaggcccatctgtgggcc
gagttggtcttcctgtacgacaagtatgaggagtttgacaatgccatcattaccatgatg
aatcatccaacagatgcttggaaggagggccagtttaaagatatcatcaccaaagtggcc
aatgtggagctgtactacaaggccgtccagttctacctggagttcaagcctttgttactg
aacgatttgctcatggttctctctcccagactggaccactcacgtgctgtcaactacttc
agcaaggtaaaacagctgcctctggtcaaaccctacctacggtcagtacagaaccataac
aacaaatcagtcaatgaagcacttaacaacctcttcatcacagaagaggactatcaggca
ctgaggacatcaatagatgcttacgacaactttgacaacattttgctggcccaacgcatg
gagaaacatgagctgattgagttcagacgaatcgctgcttacctcttcaaaggcaacaac
cgctggaaacaaagtgtggagctttgcaagaaagacaagctctataaggatgccatgcag
tatgcttcagagtccaaagacacagagctggcagaggagctcctcgcctggttcctacag
gagaacaagaaggagtgttttgctgcctgccttttcgcttgctatgacctgctgcggccc
gatgtggtgctggagaccgcctggagacacaacattatggacttctctatgccatacttc
attcaggtcatgagggagtacctcagcaaggttgataaacttgaaacttcagagtccgta
agaaaagaagaggagcaagcaacagagacacaacccatcgtctatggaacgcctcagctc
atgctgacagcgggccccagcgtgcccgtgacccctcagcaaccttacggctacggctac
caggcacctgcaggcttcgctccgccagcagttcagccaggctttggctacggcatgtga
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integrated database retrieval system
