Kryptolebias marmoratus (mangrove rivulus): 108250692
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Entry
108250692 CDS
T05608
Symbol
hif1al
Name
(RefSeq) hypoxia inducible factor 1 subunit alpha, like
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr04137
Mitophagy - animal
kmr04140
Autophagy - animal
kmr04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
108250692 (hif1al)
04137 Mitophagy - animal
108250692 (hif1al)
04148 Efferocytosis
108250692 (hif1al)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
kmr03000
]
108250692 (hif1al)
Transcription factors [BR:
kmr03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
108250692 (hif1al)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_11
PAS_3
HIF-1
PAS
PAS_4
PAS_9
PMAIP1
Motif
Other DBs
NCBI-GeneID:
108250692
NCBI-ProteinID:
XP_017296178
UniProt:
A0A3Q3AQ97
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All DBs
Position
LG2:complement(2429849..2444932)
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AA seq
651 aa
AA seq
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MEKENGTVAVKRSSSEQRKLRSRDAARCRRSQETEVFYELARTLPLPRKVCTHLDKAGIM
RVTLSFLRLQQLLQPEGDEKDEETDEDPMDAFYPEALAGFIVVLTEEGDMIFLTENVNKH
IGITQLDLLGQSVYDFVHPCDQEELRDLLNPRPGLSKTLQSKQPSERNFFLRMKSTLTSR
GRTVNIKSATWKVLHCTGHIRPFGGSAAPPAARVMTLLCEPIPHPSSVEFPLDTCTFLTR
HSMDLRFTHCEGRVTELVGYKPDDLIGRSAYEFHHALDSERIKRSLQTLLSKGQVNTSHY
RFLANSGGYVWAETQATVLYNSKTSQPEAVVCLNFILSSVEQPDVIFSSEQTRCSCPAKT
ELLAPEDSGISACESDGDPEDSEKFLFLKPKKSPEELLQLAPEAGDAAAPPAAGPVELSF
VSPPSPSLVPEDPKDLCTPQLRKLLSPIFDSVSPASSPSPARSPCKEEVMDTSEVEKFFT
FCPEEAKKKTEPLQDMEEMDLEMLAPYIPMDDDFQLTFLSALPEDADKPPAFSFKGSDGI
PAASRKRTRDSEEDMLPLLTVQDKRQKPGPSSMEEELLLSHGLLDSLEEADQSDLVLDPV
LDPGSEPRSRLLTDRDPVLGGVQGLCNTAALMRNMFAPRTADLSLPLSPLT
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atggagaaggaaaacgggactgtggcggttaaaaggagcagctcggagcagaggaagctc
cgctctcgtgacgcggcccgatgtcggcgcagtcaggaaacggaggtgttctacgagctc
gcccgcacgctgccgctgccgcgcaaagtctgcacccacctggacaaagccggcatcatg
agggtgacgctcagcttcctgcggctgcagcagctcctgcagcccgaaggagacgagaag
gacgaggagacggacgaagacccaatggacgccttctaccccgaggcgctggctggtttc
atcgtggtgctgactgaggagggagacatgatcttcctgacagaaaacgtcaacaaacac
atcggcatcactcagctggacctgctgggtcagagcgtttacgacttcgttcatccctgt
gatcaggaggagctccgagatctgctgaacccacgtccaggtctgagtaagacgcttcag
tccaaacagccgagcgagaggaacttcttcctgcgcatgaagagcacgctgaccagcagg
gggcgcaccgtcaacatcaagtctgctacctggaaggtgctccactgcacaggccacatc
cgtcctttcggcggctcggcggcgccccctgctgctcgtgtgatgacactgctgtgcgag
cccatccctcacccgtccagcgtggagttccctctggacacgtgcacgttcctgacgcgc
cacagcatggacctgcgcttcacgcactgcgaggggagggttacggagctggtcggatac
aaacccgacgatctgattggacgctcagcctacgagtttcaccacgctctggactcggag
cgcatcaagaggagcctgcagacgttgctctccaagggtcaggtgaacaccagccactat
cgcttcctggcgaacagcggcggctacgtttgggcggagactcaggcgacggtcctgtac
aacagcaagacgtcgcagccggaagccgtcgtctgcctcaacttcatcctcagctccgtg
gagcagcccgacgtgatcttctccagcgagcagacccgctgcagctgcccggcgaagacc
gagctgctggcgccggaggacagcgggatttctgcctgcgagtctgacggggatcctgaa
gactccgagaagttcctcttcctcaaaccgaagaagagcccagaggagcttctccagctg
gctcctgaagccggagacgccgcggcgccgccggcagccggtccagttgagctgtccttt
gtcagtcctcccagcccctccttggtgccggaggaccctaaagatctgtgcaccccacag
ctgaggaagctcctgtcgcccatcttcgactccgttagccccgcctcctcgccgtcgcca
gctcggagcccctgtaaagaggaggtgatggacaccagcgaggtggagaagttcttcact
ttctgtccagaagaagcgaagaagaaaaccgaaccgctgcaggacatggaggagatggat
ctggagatgctggcgccttacatccccatggacgacgacttccagctgaccttcctgagc
gcgctgcccgaggacgccgacaaaccgccggccttctccttcaaaggctctgatgggatt
cccgcggcgagcaggaagcggactcgtgactcggaggaggacatgttgcctctgctgacg
gttcaggacaagagacagaaaccaggtccttcgtcgatggaggaggagctcctcctgagc
cacgggctgctggactccctggaggaagcggaccagtcagacctggttcttgatccggtt
ctggacccgggctcagagccgcgcagccggctgctcacagacagagacccggtgctggga
ggcgttcagggactctgcaacaccgcagctctgatgaggaacatgttcgctcctcgcacc
gccgacctctcactgcccctctcacctttgacctga
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