Kryptolebias marmoratus (mangrove rivulus): 108250723
Help
Entry
108250723 CDS
T05608
Name
(RefSeq) general transcription factor IIF subunit 2 isoform X1
KO
K03139
transcription initiation factor TFIIF subunit beta [EC:5.6.2.-]
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
108250723
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kmr03021
]
108250723
Transcription machinery [BR:
kmr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
108250723
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_beta
TFIIF_beta_N
LYRM_2
Motif
Other DBs
NCBI-GeneID:
108250723
NCBI-ProteinID:
XP_017296227
UniProt:
A0A3Q3BGZ3
LinkDB
All DBs
Position
LG15:complement(2120887..2126078)
Genome browser
AA seq
268 aa
AA seq
DB search
MSEKGEVDLTGAKQNTGVWLVKVPKYLSQQWAKASGRGEVGRLRICKKGNQGKPEVSFTL
NEELTVIEGLEDKTVSAPREHPFTMQSVGGQMLAVFTETSSGQSEERSDSSSSGSGAGPD
KIALEGVVVQRAECRPAVSESYMKLKRLQIEESSKPARLSQQLDKAVTNNYKPVANHEYN
REYERKKKEEGKRARAEKQQVLDMLFSAFEKHQYYNIKDLVDITKQPVTYLKEILRDIGI
YNVKGTHKNTWELKPEYRHYQGEEKTDE
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaaaaaggagaggtggatttaaccggtgctaaacagaacacgggtgtgtggctc
gtaaaggtcccaaaatacctttctcagcaatgggcgaaagcaagcggcagaggcgaggtc
gggagactccgaatctgcaagaaaggaaaccaaggaaagccagaggtttctttcacgtta
aacgaggagctgacggtgatcgaaggtttagaggataagaccgtgtcggctccccgcgaa
catcccttcaccatgcagtcggtggggggtcagatgctggcggtcttcacagaaacatcg
tctggccagtcagaggagaggtctgacagcagcagctcaggttcgggggcgggtccagat
aagatagccttggagggagtggtggtgcagagagccgagtgccgacctgctgtcagtgag
agctacatgaagttaaagaggttacagatcgaagagtcctccaaaccggcccggctgtcc
cagcagctggacaaagccgtcaccaacaactacaaacccgtggccaaccacgagtacaac
cgcgagtacgagaggaagaagaaggaggaggggaagcgggcgagagcggagaagcagcag
gtgttggacatgttgttttctgcttttgagaagcaccaatactacaacatcaaggacctg
gtggacatcaccaaacagcccgtgacgtacctgaaggaaatcctgcgagatatcggcatc
tacaacgtgaagggaacccacaagaacacctgggagctgaagccggagtacagacactac
cagggggaggaaaagactgacgaatag
DBGET
integrated database retrieval system
