Kryptolebias marmoratus (mangrove rivulus): 108250781
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Entry
108250781 CDS
T05608
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr04517
IgSF CAM signaling
kmr04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
108250781
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
108250781
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
kmr04812
]
108250781
Cytoskeleton proteins [BR:
kmr04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
108250781
Intermediate filaments
Intermediate filament-binding proteins
108250781
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
SCAR_helical
PMC2NT
Motif
Other DBs
NCBI-GeneID:
108250781
NCBI-ProteinID:
XP_017296312
LinkDB
All DBs
Position
LG3:29975843..30018246
Genome browser
AA seq
2340 aa
AA seq
DB search
MMTTVAAEFDHMELQQQYSSGDTVNNRWDDDWDNENSSARLFERSRIKALADEREAVQKK
TFTKWVNSHLSRVSCRITDLYMDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDK
ALQFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKRSAKDA
LLLWCQMKTAGYSNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAF
NLAEQHLGLTKLLDPEDISVDQPDEKSVITYVVTYYHYFSKMKALKVEGKRIGKVLDNAI
ETEKMIEKYESLASDLLEWIEQTIIILNNRKFANSLLGVQQQLQAFNTYRTVEKPPKFTE
KGNLEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRTELIRQE
KLEQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLQAVEAATKKHEAIETDIAAYEERV
QAVVAVAKELEAERYHDIKRITARKDNVIRLWEYLLELLKARRQRLEMNLGLQRVFQEML
YIMDWMDEMKMLLLSQDYGKHLLGVEDLLQKHALVEADISIQADRVKAVVSNANKHSVCD
SGYKPCDPQVVQDRVAHLDFCYQELTQLAAERRARLEESRRLWKFFWEMAEEEGWIREKE
QILSSLELGKDLTGAVRLLSQQRALEDEMSGRAGHLQHTMAEGQAMVEAGHFGAAKIQER
IVDLQAQWVGLEQLVAARKRRLEEALALHQFQADADDVDAWTLDALRIVSSGETGHDEFS
TQALVRKHKDAAVEVASYCSVIDSLHEQVAALPREKAESEEVRGRLSGIEERYKEVSELT
KLRKQALQDALALYKMFSEADACEVWIDEKEQWLNSMEIPEKLEDLEVIQHRFESLEPEM
NSQASRVAVVNQIARQLIHSGHPSEKDIKTQQDKLNNRWSQFRDLVDQKKESLNSALGVQ
NYHLDCNETKSWIKEKTKVIESTQELGNDLTGVMALQRKLTGMERDLVAIEDKLGDLQAE
AQRLSEEHPDQAKAITGRLAEITAVWKEMKNTLKTREESLGEARKLQQFLRELDDFQSWL
SRTQTAIASEDMPNTLAEAEKLMAQHEGIKNEIQNYEEDYQKMRDMGEMVTQGQTDAQYM
FLRQRLQALDTGWNELHKMWENRQNLLSQSHAYQLFLRDTRQAEAFLNNQEYVLAHTEMP
TTLEGAEAAIKKQEDFMTTMDASEDKINAVVEAGRRLAADGNVNADRIQERVSSIDDRHK
KNREAAVELLMRLKDNRDLQKFLQDSQELSLWINEKMLTAQDMTYDEARNLHSKWLKHQA
FMAELQSNKEWLDKIQKEGMLLVSEKPETEAVVREKLSFLHTMWEKLESTTQTKAQCLFD
ANKAELFTQSCTDLDKWLGGLEGQIQSDDYGKDLTSVNILLKKQQMLENQVEVRQREVVE
LQSQVKALGQEVKDTDEVDGRRQVVEKKFQELLEPLRRRRNFLVASREVHQFNRDVEDEI
LWAQEKMPVATSTDHGHNLQTVQLLIKKNQTLQKEIQGHQPRITDILERSQTLLQDESLN
TDVIRQRLSDLQQLWKQLMEEVEQRHRRLQEAHKAQQYYFDAAEAEAWMSEQELYMMSEE
KAKDEQSAVTMLKKHQIMEQAVEDYAETVHQLSKTSRGLVADGHPESERISMRQSKVDKL
YAGLKDLSEERRGKLDERLRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQER
FREFARDTGNIGQERVDAVNRLADELINAGHGDAATVAEWKDGLNEAWADLLELIDTRTQ
ILAASFELHKFYHDAKEILGRIADKQKKLPEEVGRDQNTVEMLQRMHSTFEHDIQALGTQ
VRQLQEDAVRLQSAYAGDKADDIQRRESEVLEAWRILLEACDGRRICLLDTGDKFRFFSM
VRDLMLWMEDVIRLIEAQEKPRDVSTVELLMNNHQGIKAEIDARNDSFTSCIELGKSLLA
RKHYASPEIKEKLLQLTDKRKEMIDKWEDRWEWLRLILEVHQFSRDAGVAEAWLLGQEPY
LSSREVGQSVDEVEKLIKRHEAFEKSAATWEERFSALERLTTLELLEVRRQQEEEERRRK
PPSPEPAVVQQEEAQQHSGVTQNGFPSDQNSPQDAMEGGDLVNGIGERSSKEPSPAPSPT
SGRKTKSQSSTLPAKNQDSTFQLQSFLHRKHEWEGHNKKASNRSWHNVYCVIKNQDMSFY
KDSKAAGQGVAYHGEPAVSLKDATCDVASDYKKKKHVFKLRVPDGNEYLFQAKDEEEMSS
WIQGILNAAADRSDTEGSNPGTPASGRAQTLPATITLGTESSPGKRDKEKRFSLFSKKKQ
NT seq
7023 nt
NT seq
+upstream
nt +downstream
nt
atgatgacgacggtggcggcggagttcgaccacatggagctgcagcagcagtacagcagc
ggtgacacggtcaacaaccgctgggacgacgactgggacaacgaaaacagctcggcccgg
ctcttcgagaggtcccgcatcaaggcgctcgcagatgaacgagaggcagttcagaagaag
accttcaccaagtgggtcaactcacacctgtccagggtctcctgcaggatcacagatctc
tacatggacctgagggacggacggatgctcatcaagctgctggaggttctctccggagag
agactgccgaagcccaccaaaggccggatgcggatccactgcctggagaacgtggacaaa
gcgttgcagttcctgaaggagcagcgggttcacctggagaacatgggctcccacgacatt
gtggacgggaatcaccgcctgacgttgggtctgatctggaccatcatccttcgtttccag
attcaggacatcagtgtggaaactgaagacaacaaagagaagcgttcggccaaagacgct
ctgctactctggtgtcagatgaagacagctgggtactccaacgtcaacatccataacttc
accaccagctggagagacgggatggccttcaacgcactcattcacaaacacagacctgat
ttgattgactttgataaactgaaaaagtccaacgctcactacaacctgcagaatgctttc
aacctggcagagcagcacctgggcctgaccaaactgctcgacccagaagatatcagcgtg
gatcagcccgatgagaagtcagtcatcacctacgtggtgacgtattatcactacttctcc
aagatgaaggctctgaaggtggagggcaaacgcatcggaaaggtgctggacaacgccatc
gagacggagaagatgatcgagaagtacgaatctctggcctcagacctgctggagtggatc
gaacagaccatcatcatcctcaacaacaggaagttcgccaactctctgctgggggtccag
cagcagctgcaggccttcaacacgtaccggaccgtggagaagcctccaaagtttacagag
aaggggaacctggaggtcctcctcttcaccatccagagtaagatgagagccaacaaccag
aaggtctacatgccccgtgaaggaaaactcatctccgacatcaacaaggcgtgggagcgg
ctggagaaggcagaacatgagagggagctggctctgaggacggagctgattcgtcaggag
aagctggagcagctggccagacgcttcgacaggaaggcggccatgagagagacctggctc
agcgagaaccagaggctggtatctcaggacaacttcggctttgacctccaggccgtggag
gcggccacaaagaagcacgaagccatcgagacggacatcgcagcatacgaggagcgagtc
caggccgtggtcgccgtggcgaaggagctggaggcggagcgttaccacgacatcaaacgc
atcacagccaggaaggacaacgtgatccgactgtgggagtacctgctggagctgctgaag
gcgcgcaggcagaggctggagatgaacctgggtctgcagagggtgttccaggagatgctc
tacatcatggactggatggacgagatgaagatgttactgctgtctcaggattatggcaaa
catctgctgggggtggaggacctgctgcagaaacacgccctggtggaggccgacatctcc
atccaggccgacagggtgaaggccgtcgtcagcaacgccaacaagcactcggtgtgcgac
agcggctacaaaccctgcgatcctcaggtggtccaggaccgggtggcccacctggacttc
tgctaccaggagctgacccagctggccgccgagcgtcgcgcccgcctggaagaatctcgc
cggctttggaaattcttctgggagatggcggaggaagagggctggatccgtgagaaggag
cagatcctgtcctccctggagctgggtaaggacctgacgggagcggtgcgcctcctgagc
cagcagcgcgccctggaggacgagatgagcggccgcgccggacacctgcagcacaccatg
gccgagggccaggccatggtggaggcgggtcacttcggtgctgctaagatccaagagcga
atcgtggatctacaggctcagtgggttgggctggagcagctcgtggccgcgaggaagagg
aggctggaagaagctctggctctgcatcagttccaggccgatgcagacgatgttgacgcc
tggacactggatgcgctgcgcatagtttccagcggtgagacgggccatgacgagttctcc
acccaggcgctggtcaggaaacacaaggacgctgccgtggaggtggccagctactgctca
gtcatcgactcgctgcacgagcaggtcgcggcgctgcccagggagaaggcggagtcagag
gaggtgcgcggccgactgtctggcatcgaggagcgctacaaggaggtgtcggagttgacg
aagctgaggaagcaggccctgcaggacgcgctggcgctctacaaaatgttcagcgaggcc
gacgcctgcgaggtttggatcgatgagaaggagcagtggctgaacagcatggagatccct
gaaaaactggaggacctagaggtcatacagcacaggtttgagagtctcgagccagagatg
aacagccaggcgtctcgtgtcgctgtggtgaaccagatcgctcgacagctgatccacagc
ggacatccgagcgagaaagacattaagactcagcaggacaaactcaacaacaggtggagt
cagtttcgggaccttgtggaccaaaagaaggagtccttgaactcagctttgggtgtgcag
aactaccacctggactgcaacgagaccaaatcctggatcaaagaaaagaccaaagtcatc
gaatccacccaggaactgggcaatgacctgaccggagtcatggctctgcagcgcaaactg
accggcatggagcgagacttggtcgccattgaggacaagctgggggacctgcaggctgag
gcccagcggctgtcggaggaacacccagaccaggccaaggccatcacgggacgcctggct
gagatcactgccgtctggaaggagatgaagaacactctgaagactcgagaggagtctctg
ggcgaagcccggaagctgcagcaatttctgcgggagctagacgacttccagtcctggctg
tcccgcactcagaccgccatcgcctccgaggacatgcccaacacgctggctgaggccgag
aagctaatggcccaacacgaaggcatcaagaacgagatccagaactacgaggaggactac
cagaagatgcgggacatgggggagatggtgacgcagggccagacagacgcgcagtacatg
ttcctgcgccagcggttgcaggcgctcgacaccggctggaatgagctccacaaaatgtgg
gagaatcgtcagaacctgctgtcccagtcccatgcttaccagctgttcctgagggacacc
aggcaggccgaggccttcctcaacaaccaggagtacgttctggctcacactgagatgccg
accaccctggagggggctgaggccgccatcaagaagcaggaggatttcatgaccaccatg
gacgccagtgaggataagatcaacgccgtggtggaggcgggtcggcggctggcagctgac
gggaacgtcaacgccgatcgtatccaggagagagtctcctccattgatgacaggcataag
aagaacagggaggctgccgtggagctgctgatgagactgaaggacaaccgagacctgcag
aagttcctgcaggacagccaggagctgtctctgtggatcaatgagaagatgctgacggcg
caggacatgacctatgacgaggccaggaacctgcacagcaagtggctgaagcaccaggcc
ttcatggccgaactgcagtccaacaaggagtggctggacaagatccagaaggaagggatg
ctgctggtgtcggagaagccagagaccgaggcggtggtgagggagaagctgtcgtttctc
cacaccatgtgggagaagctggagtccaccactcagaccaaagcccagtgtctgtttgac
gccaacaaggccgagctgttcacgcagagctgcaccgacctggacaagtggctgggcggc
ctggagggccagatccagtcagacgactacggcaaagacctgacgtccgtcaacatcctg
ctgaagaaacagcagatgctggagaaccaggtggaggtgcgtcagagggaggtggtggag
ctgcagagccaggtgaaggccctcggtcaggaggtgaaggacaccgacgaggttgacggg
cgaaggcaggtggtggagaagaagttccaagagctgctggagccgctgcggcgccgcaga
aacttcctggtggcatccagagaagttcatcagttcaaccgtgacgttgaggacgaaatc
ctctgggcccaggagaagatgcctgtggccacatcgactgaccatggacacaacctgcag
acggttcagctgctcatcaagaagaaccagacgctgcagaaggaaatccagggtcatcag
cctcgcattaccgacatcctggagcgcagtcagactctcctgcaagacgagtccctcaac
accgatgtgatccgtcagcgtctgtccgacctgcagcagctgtggaagcagctgatggag
gaagtggagcagcgacacagacggctgcaggaggcccataaagcccagcagtactacttc
gacgcagccgaggctgaggcctggatgagcgaacaggagctctacatgatgtccgaggag
aaggccaaggatgagcagagcgccgtcaccatgctgaagaagcatcagatcatggagcag
gcggtcgaggactacgctgagactgtccaccagctgtccaaaaccagccgaggactcgtg
gcagacggacacccagagagtgagcggatcagtatgcggcagtccaaggtggacaagctg
tacgccggcctgaaggacctgtccgaggagaggcgggggaaactggacgagcggctccgc
cttttccagctcaaccgagaggtggatgacctggagcagtggatcgctgagcgagaggtg
gtggctgggtcgcacgagctgggccaggattacgaacacgtgactatgctgcaggagcgt
ttccgggagtttgcacgggacactggaaacattgggcaggagcgtgtagacgccgttaac
cggctggcagacgagctgatcaacgccggacacggtgacgcagccacggtagccgagtgg
aaagacggcttgaacgaggcctgggccgacctgctggagctcatcgacacccgaactcag
atcctggccgcctccttcgagctccacaagttctaccacgacgccaaggagatcctggga
cgcattgcggacaagcagaagaagctgccggaggaggtgggccgagaccagaacacggtg
gagatgctgcagaggatgcactccacctttgaacatgacatccaggcgctgggaacacag
gtgaggcagcttcaggaggacgctgtgcgcctgcagtcagcgtacgccggggataaggcg
gacgacatccagcgccgggagagcgaagtgctggaggcctggcggatcctcctggaggct
tgtgatggacgcaggatctgcctcctggacaccggggataagttccgcttcttcagcatg
gtccgggacctcatgctgtggatggaagacgtgatcaggctcatcgaggcccaggaaaaa
cccagagacgtttcaactgtggagctgctgatgaacaaccatcagggcatcaaggcggag
atcgacgctcgaaacgacagcttcacctcctgcatcgagctggggaagtctctgctggcc
cggaaacactacgcttcacccgagattaaagagaagctgctgcagctgacggacaaaagg
aaggagatgatcgataagtgggaggaccgatgggagtggctccgcctcatcctggaggtc
caccagttctcgcgggacgccggcgtggccgaggcctggctgctgggccaggagccgtac
ctgtccagcagagaggtggggcagagcgtggacgaggtcgagaagctcatcaaacgccac
gaagccttcgagaagtccgccgccacctgggaggagcgcttctctgccctggagaggctg
accacgctggagctgctggaggtcaggaggcagcaggaggaggaggagaggaggaggaaa
ccaccgtccccagaaccagctgtggtccagcaggaggaagctcagcagcacagcggcgtc
actcagaacggattcccatcggaccagaactctcctcaggacgccatggaaggtggcgat
ctggtgaacgggatcggcgagcgcagctcaaaggaaccaagccccgccccctcgccgacg
tccggcaggaagactaaaagccagtcgtccacgctgcccgccaagaaccaggactcgacc
tttcagctccagagcttcctgcaccgcaaacatgagtgggagggtcacaacaagaaggcc
tccaacaggtcgtggcacaatgtgtactgcgtcatcaaaaaccaggacatgagcttctac
aaggacagcaaggcagctggacagggtgtggcttatcacggcgagccggccgtcagcctg
aaggacgccacctgcgacgtggcgtccgactacaagaagaagaaacacgtcttcaaactc
agagtcccggatggaaacgagtacctgttccaagccaaagatgaggaggagatgagcagc
tggatccagggcatcctgaacgccgccgccgaccgctccgacaccgagggcagcaacccg
ggaacgccggcgtccgggcgtgctcagacgctgcccgccaccatcacgctcggcaccgag
tccagtcccggcaagagggacaaggagaaacgcttcagcctcttcagcaagaagaaacag
tag
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integrated database retrieval system
