Kryptolebias marmoratus (mangrove rivulus): 108250783
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Entry
108250783 CDS
T05608
Symbol
vsx1
Name
(RefSeq) visual system homeobox 1 isoform X2
KO
K09335
visual system homeobox protein 1
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
kmr03000
]
108250783 (vsx1)
Transcription factors [BR:
kmr03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
108250783 (vsx1)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
108250783
NCBI-ProteinID:
XP_017296316
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Position
LG22:complement(6231796..6240408)
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AA seq
353 aa
AA seq
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MTGSEEKFRVRMFSPGFGIEKSRLHGSGFRSKGFAITDLLGLDSDLQVRQQPGGAPGSCL
AAAGSGSESQGPAGGLGAFSFPGGSVPLGLGFLCSLAAQQPTGTPCFLPGHLPLLQTRTE
SQYLQNLEAQRETYSDEECLSDRNESKSSGTSQKRKKRRHRTVFTSHQLEELEKAFHEAH
YPDVYAREMLAMKTELPEDRIQVWFQNRRAKWRKREKCWGRSSVMAEYGLYGAMVRHSIP
LPESILNSAKNGMMGSCAPWLLGMHQKSLEMSKKCSSPPASDSTPSDSFCDTSVRRASDA
REEEELLEEDDVEEEVAIDLSSSSKQQQEEGGASTRPAPSPQQPSVSESNRHS
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgactggttctgaagaaaagttccgggtcaggatgttttctccggggttcgggatcgaa
aagtcccgcctgcacggctccgggttccggtccaaaggctttgccatcaccgacctactg
ggcctggattcggacctgcaagttcggcagcagcccggcggagctccgggttcttgtctg
gcggctgcgggctccggttcagagtcgcaggggcccgcaggtggactcggcgcgttttcc
ttcccggggggttcggtaccgctcggactgggctttctgtgcagcctggcggcccagcaa
cctaccggaaccccctgcttcctgccgggtcacctgccgctgctgcagacccgaaccgag
agtcagtacctgcagaacctggaggcccagagggaaacatactccgatgaagagtgtctg
tcggatcgaaacgagtccaaaagctccggaacctcccagaagaggaagaagaggagacac
aggaccgtgtttacgtcccatcagctggaggagctggagaaagcgtttcacgaggctcat
tatcccgatgtctatgcccgagagatgctcgccatgaagacggagctgcccgaggaccgc
atccaggtctggttccaaaaccgacgggctaaatggcgtaagcgtgagaagtgttggggc
cgcagcagcgtcatggctgagtacggtctgtatggcgccatggtccgacactccatccca
ctgcctgagtccatcctgaactccgccaagaacggtatgatgggatcctgcgcaccctgg
ctgctcggtatgcaccagaagtctctggaaatgtccaagaagtgttctagtcctcctgcg
tcagactcgaccccctctgactcattctgcgacacttctgtgcggcgagccagcgatgct
cgggaggaggaggagcttctggaggaggacgacgtggaggaggaggtggccatcgattta
tccagttcctctaaacaacaacaggaagagggcggggcatccacaaggcccgccccctca
ccacagcagccgagcgtctctgaatcaaaccggcacagctga
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integrated database retrieval system
