Kryptolebias marmoratus (mangrove rivulus): 108250833
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Entry
108250833 CDS
T05608
Symbol
nudt21
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 5
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108250833 (nudt21)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kmr03019
]
108250833 (nudt21)
Messenger RNA biogenesis [BR:
kmr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
108250833 (nudt21)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX_2
Motif
Other DBs
NCBI-GeneID:
108250833
NCBI-ProteinID:
XP_017296387
UniProt:
A0A3Q3FE52
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Position
LG15:9107109..9110486
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AA seq
231 aa
AA seq
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MSVVPPSRSNTGWPRRNSEQFANKYMSSGASAKPLTLERTINLYPLTNYTFGTKEPLYEK
DSSVAARFQRMREEFDKMGMRRTVEGVLIVHEHRLPHVLLLQLGTTFFKLPGGELNPGED
EVEGLKRLMTEILGRQDGVKQDWVIDDCIGNWWRPNFEPPQYPYIPAHITKPKEHKKLFL
VQLQEKALFAVPKNYKLVAAPLFELYDNAPGYGPIISSLPQLLSRFNFIYN
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtcgtgcctcccagtcgctccaacaccggctggccgcgacgcaactcggaacag
ttcgcgaacaaatacatgagcagcggggcctcggccaagccgctaaccctggagaggacc
atcaacctataccctctcaccaattacacctttggcactaaggagcctctgtatgagaag
gacagctccgtggctgccagattccagcggatgcgcgaagagttcgataagatgggcatg
cgccggacggtggagggcgttctcatcgtgcacgagcacaggctgcctcacgtgctgctt
ctgcagctggggacgacgttcttcaaactgcccggtggggagctgaaccccggagaggac
gaagtggaggggctgaaacggctgatgaccgagatcctcggacggcaagatggggtgaag
caggactgggtgattgacgactgcatcggcaactggtggcgcccgaactttgagcctcca
cagtacccctacattccagctcacatcaccaaaccaaaggagcataaaaaactgttcctg
gttcagctgcaggagaaagcactgtttgccgttcccaagaactacaaactggtggctgca
ccgttgtttgagctgtatgataacgctccaggatacggaccaatcatctccagtctacca
cagctgttgagcaggttcaacttcatctacaactga
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