Kryptolebias marmoratus (mangrove rivulus): 108250890
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Entry
108250890 CDS
T05608
Symbol
rtel1
Name
(RefSeq) regulator of telomere elongation helicase 1 isoform X1
KO
K11136
regulator of telomere elongation helicase 1 [EC:
5.6.2.3
]
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kmr03032
]
108250890 (rtel1)
Enzymes [BR:
kmr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
108250890 (rtel1)
DNA replication proteins [BR:
kmr03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
108250890 (rtel1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
ARCH_RTEL1
HHD_RTEL1
ResIII
DEAD
SR-25
DUF3708
PAH_ZNF598
Motif
Other DBs
NCBI-GeneID:
108250890
NCBI-ProteinID:
XP_017296471
UniProt:
A0A3Q2ZHK8
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Position
LG8:28997855..29019404
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AA seq
1179 aa
AA seq
DB search
MPSLNLNGVTVNFPFTPYECQKDYMTKVLECLQEKQNGVLESPTGTGKTLCLLCATLAWR
EHFRDTISARKIADRLKGEEMFPNVSLASWGTAATDGDKPMYYTDIPKIIYASRTHSQLA
QVISELKTTSYRPKVCVLGSREQLCINQEVMRQESNHVKVHMCRGKVSTRSCPFYNKVEE
VSTDRDLVNSILDVEDLVKFGSKQRVCPYFLTRSLKQQADIILMPYNYLLDPKSRRAHNI
ELNGAVVIFDEAHNVEKTCEESTSFDLTPYDVASAVSAVDRLLVDQAKEVSAGDAVSEDM
NVESLGSGFKINIATIAKIKQILLDLEAAIDSYDVPNDRGVTKPGIFIYELLERAHLTYQ
TKTTVCEALEQIIANLAGQPGVFLSTSGLQKLADIIQLVFCGEPSERDRRKQMEFNTAHF
KVHIHRDTSFHKKKQTVDDLWSSSKKQGNVLSYWCFSPGFSMQDLKNQGVRCIILTSGTL
SPLSSFTSEMRIEFPVLLENGHVIDRDQIFVSVIDRGPDGVQLSSAFNRRFVPENMASLG
NTVANLSRVVPHGLLVFFPSFPLMEKTLEFWRANGHADRIENLKPMFVEPKGKGTFNEVI
DGYYSKVNEPATRGGSFFAVCRGKASEGLDFADTFGRGVIITGLPFPPKLDPRVVLKMQY
LDETSRRKAPGTKVLSGQEWYRQQAFRAVNQAIGRVIRHREDYGAIFLCDQRFKNWDARA
NLPSWLRPYVRLHDGFGNVVRDVSQFFRVAQKIRPVAVKTPAAEASAAEHSSDAAASSSS
SSSSSSSSSSSSSSSSCCCVQKAKVLDAHLPSLKRRRLDENGGAGGAAKICINYDSEVRE
SQRKPANLLDALDRGDRCHGDDAAAEDRAGCLSTLSLQQEKKMEEELRGGRRKIKLVQKL
GGSEDVSEGKGSRAKQFLADMKKSLSKENFDRIVQALQTYKNSDRLDVLLGETAVLSEDE
NTHGLLRGFYQFVRPHHKKSFDEKCQELTGWGCGFKPDHSLSKDEKKAVMLQGAAENQAS
GGQSATCSQLDTQQLNQGGPHLSQRGLKEAQTGSAQKNQIQSAFMADVKKALGAEKAALF
FQAVSSYKKTDGYENLVTTVVSLFTERDENFNLLIRFGMFVRPHHKKQYNEMLDALIGRL
ASAAEAPVLNEEQQQAPRSPPPAAQSKISSFFFRNQKKV
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atgccttcactaaacctgaacggagttacagtaaatttcccttttactccatatgaatgt
cagaaagactacatgactaaagtcctggaatgtcttcaggagaaacagaacggggttctg
gagagtccaacgggaaccggtaaaactctgtgtctgctgtgcgccacgctggcctggagg
gagcacttcagggacaccatctccgctcgaaagatcgccgacaggctgaaaggagaggag
atgttcccaaacgtgtccctcgcctcctgggggacggccgccaccgacggagacaaacca
atgtactacactgatattcccaaaataatctacgcatccaggacgcactctcagctcgca
caggtgatcagtgagttaaagacaacttcttacaggccgaaggtgtgtgtgctggggtcc
agagagcagctttgtatcaatcaggaagtcatgcgtcaggagagcaaccacgtcaaggtc
catatgtgccgaggaaaggtttccaccaggtcgtgtcccttctacaacaaagttgaagag
gtgagcactgacagggatttggtgaattctatccttgatgtggaagatttggtgaaattt
ggcagcaaacagagggtctgtccgtacttcctgacgcgctccctgaagcagcaggctgac
atcattttgatgccgtacaactacctgctggatccgaagagccgcagggcgcacaacatc
gagctgaacggcgctgtggtcatctttgatgaagctcacaacgtggagaagacgtgcgag
gagtcgacgtccttcgacctgaccccctacgacgtggcctcggccgtctccgccgtggac
aggctgctggtggaccaggctaaagaagtcagcgccggggacgccgtctccgaggacatg
aacgtcgagtccctcggctccggttttaaaataaatatcgccaccattgctaaaatcaaa
cagatcctgttggacctggaagctgctatcgattcctacgacgttccaaatgaccgaggc
gtcacaaaacctgggatcttcatctacgagctgctggaacgcgcccacctgacctaccaa
accaagacgacggtttgcgaggctctggagcagatcatcgccaacttggccggacaacca
ggagtgttcctcagtacgagcggtctgcagaagctggctgatatcatccagctggttttc
tgcggcgagccgtcagaacgggacagacggaaacagatggagttcaacacggctcacttt
aaggttcacatccatcgagacaccagcttccacaagaagaaacagacggtggatgatttg
tggtcttcatcgaagaaacagggaaacgttctgagctactggtgcttctctccgggcttc
agcatgcaggacctgaagaatcaaggcgtccgctgcatcatcctgaccagcgggacgctg
tctcctctgtcctccttcacctccgagatgaggatagaattccccgtgctcctggagaac
ggtcacgtcatcgatcgggaccagatcttcgtcagcgtcatcgatcgaggtccggacggc
gttcagctcagttcggcgttcaatcggaggtttgttcctgagaacatggcgtctttagga
aacactgtcgccaacctgagccgagtcgttcctcacggcctcctggtgttcttcccgtcg
ttccccctgatggagaaaactctggagttttggagagcgaacggccacgcggatcgcatc
gagaacctgaagcccatgttcgtggaacccaaagggaagggaacctttaacgaggtcatc
gacggttattacagcaaagttaacgagccggcgacccgaggaggaagcttcttcgccgtg
tgtcgggggaaggccagcgagggtttggactttgccgacactttcggccgaggcgtcatc
atcaccggccttcccttccctcccaagctggacccccgggtcgtcctgaagatgcagtat
ttggacgaaacgtcccggaggaaagctccggggacgaaggttttatcggggcaggagtgg
taccggcagcaggcgttcagagccgtgaaccaggccatcggcagagtcattcgccaccgg
gaggactacggcgccatcttcctgtgcgatcagaggtttaaaaactgggacgcccgagcc
aacctgccctcctggctcaggccgtacgttcggctccacgacgggttcgggaacgtcgtc
cgtgacgtctctcagttcttcagggtcgcacagaaaatcaggcccgtggcggtgaagacg
ccggcggctgaagcttctgcagccgagcattcatcagacgccgccgcctcctcctcctcc
tcctcatcctcatcctcatcctcatcctcatcctcatcctcatcctcctgctgctgcgtc
cagaaggccaaagtcctggacgctcaccttcccagcctgaagaggagacgactcgacgag
aacggcggcgccggcggggcggctaaaatctgcatcaactacgactccgaggtgagggag
agtcagaggaagccggccaacctgctggatgctctggacagaggtgatcgttgccacgga
gacgatgctgctgcagaggaccgggctggctgtttgtccacgctgtcccttcagcaggag
aagaagatggaggaagaactgcgaggagggagacggaaaataaagctggtccagaagctg
ggcggctctgaggacgtgtcagagggtaaaggcagcagggcgaagcagttcctggcggac
atgaagaagagtctgagtaaggagaacttcgaccggatcgtccaggctctgcagacctac
aagaactcggaccggctggacgtcctgctgggcgagaccgccgtcctgtctgaggacgag
aacacgcacggcctgctgcgaggtttttatcagttcgttcggccgcatcacaagaagagc
ttcgacgagaaatgccaggagctgaccgggtggggctgcgggttcaaaccggaccactcg
ctgtccaaggacgagaagaaagctgtgatgctgcagggcgcggcagaaaaccaggcgtct
ggaggtcagagcgccacctgcagtcagctcgatacgcagcagctcaaccagggaggaccc
cacctgagccagcggggcttaaaggaggcccagaccggttctgctcagaagaaccagatc
cagtccgccttcatggctgacgtgaagaaagccctcggagcagaaaaggcagccctgttc
ttccaggccgtctccagctacaagaagacggacggctacgagaacctggtgaccacggtg
gtgagcctgttcacagagagggacgagaacttcaacctgctgatccggtttgggatgttt
gttcggccgcatcataagaagcagtacaatgagatgttagacgctctgattggtcggctg
gcttcagctgctgaggctccggttctgaacgaggagcagcaacaagctcctcggtctcct
cctccggcagctcaaagcaagatttccagttttttcttcagaaaccaaaagaaggtttga
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integrated database retrieval system
