Kryptolebias marmoratus (mangrove rivulus): 108250933
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Entry
108250933 CDS
T05608
Symbol
utp4
Name
(RefSeq) U3 small nucleolar RNA-associated protein 4 homolog isoform X2
KO
K14548
U3 small nucleolar RNA-associated protein 4
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
108250933 (utp4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
kmr03009
]
108250933 (utp4)
Ribosome biogenesis [BR:
kmr03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
108250933 (utp4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_THOC3
Beta-prop_WDR5
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40_Prp19
WDR55
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_RIG_2nd
Beta-prop_WDR36-Utp21_1st
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_Aladin
Beta-prop_HPS5
Beta-prop_SCAP
WD40_Gbeta
WD40_MABP1-WDR62_2nd
Beta-prop_NUP159_NUP214
Beta-prop_TEP1_2nd
Ge1_WD40
Beta-prop_WDR75_1st
Beta-prop_IP5PC_F
Beta-prop_SPT8
Fungal_virus_P2_C
Lactonase
PROPPIN
Motif
Other DBs
NCBI-GeneID:
108250933
NCBI-ProteinID:
XP_017296524
UniProt:
A0A3Q2ZNT2
LinkDB
All DBs
Position
LG11:26480687..26493178
Genome browser
AA seq
688 aa
AA seq
DB search
MGEFKVHRVRFFDYMPSAIRAVAFCRRTERLAAARADGSVEIFNFADNYFQEKVIPGRDG
RAVEALCWVGRRLFSAGLDGEITEYDLENLRPRYSLEAYGGPVWTISSNKQGTLLAAGCE
DGTVKMFEILEDRIQFQRNLDRQKGRIVSLSWHPSGAQIAAGMMDMIRIFDTETGHASHR
LLVERGAGASKTQEVVVWSVAFLSDSTIISGDSAGKVQIWDGFTGTLVRTHLVTKWDVLV
LSVSPDESSVIAGTSEGTVTQFQFISSAVEPLPGSDRQWVRTRTFKNHSHDVRALVHTDT
AVVSGGMDTQLVVRPLLDKVEKNTQESALRKITFPHKNLVSCAKKAGLLLFQFPDHLEVW
RLGDSDGNGKPGDILPVKRKPEKLIQLNRKGDDQICCSALSPCGGWLAYSTVCGVRLYRL
QLDNNNICINKVSKVPKELCSAQQLCFSSDSSRFFASSSQSSVVVVGLQQLEWRHLQTLR
PKSGSREPVNLLAPSEDGRWLVTANTDCEIHVFDLQKLKLHCSLPVYASCPTAVSVHPTS
GCLVSVHADRQILEFSLEQKEYTEWSRKLQQQGLHPLWLQRDTPVTAVTFDPRNPAHIIL
HDAFMFCVIDQTLPLPDAKTNLYNQLVLRSLPPAERSRNGHAFKICKSFQNLLSVALLED
RSLVVVERPLQDIAARLPAPVRQKKFAT
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atgggggagttcaaagttcaccgcgttcgcttctttgactacatgcccagtgccatccgg
gccgtggcgttctgccgccgcacggagcggctggcggcggcccgagctgacggctcggtg
gagatctttaacttcgctgacaactacttccaggagaaggtgatccccgggcgggacggg
cgggccgtggaggctctgtgttgggtgggtcggcgtctgttcagcgccggattggatgga
gaaatcacggagtacgacctggagaacctgaggccccgatacagcctggaggcctacgga
gggcccgtttggaccatcagcagcaacaagcaggggactctgctggcggctggctgtgag
gacggaaccgtgaagatgtttgagatcctggaggacaggattcagtttcagaggaacctg
gaccgacagaaaggtcggatcgtgtccctgtcctggcatccgtccggagcgcagatcgca
gcagggatgatggacatgatccgaatctttgacacagaaacaggccacgcctcccaccgc
ctgctggtggagcgcggtgcgggagcctccaagacgcaggaagtggtggtttggagcgtc
gccttcctgtccgacagcaccatcatcagcggggattctgcagggaaggtccagatctgg
gacggcttcacaggaactctggtccggactcacctggtcaccaagtgggacgtcctggtt
ctgtccgtctcaccggatgagagcagcgtgatcgccgggacgtctgagggaactgtgacc
cagtttcagttcatctcctccgctgtggagccactgcctggttcggaccggcagtgggtc
agaaccagaacctttaagaaccactcgcatgacgtgagggcgctggtccacaccgacacc
gctgtggtttctggaggaatggacactcagctggtggtgcgacccctgctggacaaagtg
gagaagaacacccaggagtcagcgctccgtaaaatcactttccctcacaaaaatcttgtg
agttgtgccaagaaagcaggactgctgctcttccagtttccagatcatctggaggtatgg
aggcttggagacagcgatggcaacgggaagcccggcgacattctgcctgtgaagaggaaa
cctgagaaactgatccagctgaacaggaagggagacgatcagatctgctgcagtgctctg
tctccatgtggggggtggttggcgtactccaccgtctgcggcgttcgtctctacagactg
cagctggacaacaacaacatctgcatcaacaaggtgtccaaagtgcccaaagagctctgc
tcggcgcagcagctctgcttctcctctgactcctccagattcttcgcctcctccagccag
tcgtctgtcgtcgtcgtcggcctccagcagttggagtggagacaccttcagaccctcaga
cccaagtctggctccagggagccggtcaacctgctggcgcccagcgaggacgggaggtgg
ttggtgacggccaacacagactgtgagatccacgtcttcgacctccagaagctaaagctc
cactgctcgctccccgtctacgcctcctgtcccactgccgtctccgtccaccccacgagc
ggctgcctcgtgtccgttcacgccgaccggcagatcctggagttctccctggagcagaag
gagtacacggagtggagcaggaagctgcagcagcagggccttcaccccctgtggctgcag
agggacacgcccgtcaccgccgtcacctttgaccccagaaacccggcgcacatcattctg
cacgacgccttcatgttctgcgtcatcgaccagactctgccacttcctgatgcaaagacc
aatctgtacaaccagctggtcctcaggagccttcctccggccgagaggagcaggaacggc
cacgccttcaagatctgcaagagcttccagaacctcctgagcgtggcgctgctggaggac
cgctctctggtggtggtggagcgccccctgcaggacatcgcggcccgcctgcctgctcca
gtccggcagaagaaattcgccacataa
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