Kryptolebias marmoratus (mangrove rivulus): 108250987
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Entry
108250987 CDS
T05608
Symbol
farsb
Name
(RefSeq) phenylalanine--tRNA ligase beta subunit
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
108250987 (farsb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
kmr01007
]
108250987 (farsb)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
kmr03016
]
108250987 (farsb)
Enzymes [BR:
kmr01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
108250987 (farsb)
Amino acid related enzymes [BR:
kmr01007
]
Aminoacyl-tRNA synthetase
Class II (U)
108250987 (farsb)
Transfer RNA biogenesis [BR:
kmr03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
108250987 (farsb)
Prokaryotic type
108250987 (farsb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_synthFbeta
PhetRS_B1
EF1_GNE
B5
B3_4
Arc1p_N_like
EAD7
EF-1_beta_acid
Motif
Other DBs
NCBI-GeneID:
108250987
NCBI-ProteinID:
XP_017296606
LinkDB
All DBs
Position
LG2:complement(31604126..31628967)
Genome browser
AA seq
844 aa
AA seq
DB search
MPTVGVKRDILFSALGRAYSDEEFDELCFEFGLELDEITSEKEIISKEQGDSKASGASDV
ILYKIDVPANRYDLLCLEGLVRGLRVFKNKIKAPLYRRVSPVSGDPQRLIITKETATVRP
HAVAAVLRNITFTQERYDSFIELQEKLHQNICRKRSLVAIGTHDLDTISGPFMYTAKAPT
DISFKPLNQTKEYTATQLMSLYKTDSHLRHYLHIIEDKPVYPIIYDSNGIVLSMPPIING
DHSKISLKTRNVFIECTATDLTKAKIVLDMMVTMFSEYCAQPFTVEETEVVYPDGKTYMY
PELAYRKEKLSAEFINRKVGINESTERIAQLLTRMCLFSQATGSGDEIEVEIPPTRSDVI
HACDIMEDAAIAYGFNNITRTTPRSYTVANQLPLNKLTELLRQDLAAAGFTEALNFVLCS
QEDIADKLGKKISETRAAHISNPKTAEFQVARTTLLPGLLKTLAANRKMPLPLKLFEISD
VVLKDNTKDVGARNSRRFCAVYYNKSPGFEVIHGLLDRTMQLLEVKVGSREGYHIRAADD
STFFSGRCAEIFVHGKSVGHLGVLHPDVIERFELTMPCSALEMDIELFLGHTTETLLTHD
VPMQETIKRQFQTQGESQQAPPSHPPSTKNVFGDMNTQRGLKALNDFLANKSYIDGFVAS
QADAAVFDTIPSPPSQSFCHLRRWYNHIRSFHLERACLPSAKGQSVVPPTPPTSTNNPSD
DDIGLLGSSEEAESSEVAKMREQHLGKHTTQGQVLVAKTYIVLDVKPWDEETDMAKLEEC
IRSVSMDGLLWGQSKLVPVGYGVKNLQIDCVVEDDKVGTELLEEAITAFQKYVQSVDVAA
CKKI
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atgccgactgtcggagtaaagagagacattctcttctcagctttaggcagagcttattct
gacgaggagtttgacgagttgtgtttcgagtttgggctggagctggatgaaattacctca
gaaaaggagataatcagcaaggagcagggcgactccaaagcttcaggtgcatctgacgtc
attttgtacaagatcgacgtacctgctaaccgttacgacttgctatgtctggagggactg
gtccgtggactgcgggtcttcaagaataagatcaaagcccctctctacaggcgtgtgagc
ccagtcagcggggaccctcagaggctgatcatcactaaagagacagccacagtgcgaccc
cacgctgtagcagccgtgttgaggaacatcactttcactcaggagcgctatgacagtttc
attgagctgcaagagaagctacatcagaacatctgcaggaagaggagcctggtggccatc
gggacccatgacctggacaccatctctgggcctttcatgtacacggccaaagctcccaca
gatatcagcttcaagccgctcaaccagaccaaagaatacactgcaacccagctcatgagc
ctctacaagacagacagtcacttgaggcattaccttcacataattgaggacaagcctgtg
tatcccatcatctatgacagtaacggcattgtcctgtctatgcctcctataatcaatggg
gatcattcaaaaatctccttaaagacaaggaatgtcttcattgagtgcacagcgactgac
ctgaccaaggcaaagattgtgctggacatgatggtgaccatgttcagtgagtattgtgct
cagcctttcacggtggaggaaactgaggtggtgtacccagatggcaagacctacatgtac
ccggaactggcttataggaaggagaagctgtctgctgagtttatcaaccgaaaagttggc
attaatgagtcaactgagaggatagctcaactgttgaccaggatgtgcctgttctcccaa
gcaactggttccggcgatgagatcgaggttgaaatcccacccactcgttcagatgtcatc
catgcttgtgacatcatggaggacgctgccatcgcctacggtttcaacaacatcactcgt
accacgccacgcagctacactgtagctaaccagcttccacttaacaaactgacagaactg
ttgagacaggacctggcagctgctggattcacagaggctctcaactttgttctgtgttct
caagaggatatagctgacaagcttgggaaaaaaatctcagagaccagagcagctcatatt
tccaaccccaagacagcagagtttcaggttgcacgcaccacgctgctgccaggcctgctg
aaaactctagctgccaacaggaagatgcccctccccctcaaactgtttgagatatcagat
gtggtgctgaaggacaacaccaaagatgtcggggcgaggaacagtcggcgtttttgtgcc
gtctactacaacaaaagtccaggatttgaggtgattcacggcctgttggaccgaactatg
cagctgctggaggtgaaggtgggcagcagagagggataccacattcgtgctgcagacgat
tccacctttttctctggtcggtgtgctgagatctttgtacatggaaagagcgtcggccat
cttggagtcctccatccagatgttattgagcgctttgagctgaccatgccctgttctgcc
ctggagatggacatcgagctgttccttggccacaccacggaaacccttctcacacatgac
gttcctatgcaggaaaccatcaagcgccagttccaaacacaaggtgaatcccagcaggcg
cccccatcccacccaccttccactaaaaacgtctttggtgacatgaacactcagagaggc
ctcaaagccctgaatgatttcctggccaacaaaagctacattgacggttttgtggcatcc
caggctgacgctgcggtgttcgataccatcccttcccccccctcacagtccttctgccat
ctcaggcgctggtacaaccacattaggtccttccacttggagagagcatgtctcccatca
gccaagggtcagtctgtagtcccacctactccccccacctcgaccaacaaccccagcgac
gatgacattggccttttaggctccagtgaagaagcggagagctcagaggtggctaaaatg
agggagcagcacctgggtaaacataccacccaggggcaagtgctcgttgctaagacctac
attgtgcttgatgtaaaaccctgggatgaagagacagacatggccaagctggaggagtgc
atccgcagcgtcagcatggatgggctgctgtgggggcagtccaaactggtgccagtaggc
tacggcgtgaagaatctgcagatagactgcgtggtagaggatgataaagtgggcacagag
ctgctggaggaagccatcactgcctttcagaaatatgttcaatctgtggatgtggctgct
tgtaagaagatctga
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