Kryptolebias marmoratus (mangrove rivulus): 108251091
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Entry
108251091 CDS
T05608
Symbol
nup98
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96 isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108251091 (nup98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kmr03019
]
108251091 (nup98)
03036 Chromosome and associated proteins [BR:
kmr03036
]
108251091 (nup98)
Messenger RNA biogenesis [BR:
kmr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
108251091 (nup98)
Chromosome and associated proteins [BR:
kmr03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
108251091 (nup98)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
108251091
NCBI-ProteinID:
XP_017296748
UniProt:
A0A3Q3A597
LinkDB
All DBs
Position
LG13:140040..156761
Genome browser
AA seq
1811 aa
AA seq
DB search
MFNNSFGTPFGGGTGGFSSSSTFGQQNTSFGTAGGFGTSAFGATTNTGGLFGSTQNKPGG
LFGSSTFSQPATSSTSTGFGFGAASGTSTSLFGNTGAGATSGLFSQPTNAFGANKPTSFG
SFGTSTSGGAGLFGSTNTTSNPFGGSSSLFGGSGFSASQQPGTTVKFNPITGSDTMVKAG
VTTSINTKHQCITAMKEYENKSLEELRLEDYQAGRKGPANPMAPGTGGLFGGATATSSAA
TGLFGSAAPNTNFNFGPNKTTFGATATGTFGPTTAGLFGQQTQPPAGSLFKPFGSTTTTQ
STGFTFGNTNTMGQPNTSSIGLFGNTAASQPGGLFGPTQTSTATGFGTASGLFGQPNAAF
GTVGAQQSLFGNKTAGFGTTTTSASSFGAGTGLFGNKPALTLGTGTNTSTFGFGANPAGG
GLFGNKATTGGLGTGLGTSFGTVGTGPSLFGTNQNKLGTTLGTMGTFGTAGFNSGTSSLG
FGAPQQQPVALTDPNANAAQQAILQQQLNVLAYSPYGDSPLFRNPLSDPKKEERLKPTNP
TAQKALTTPTHYKLTPRPATRVRPKALTSSGGSKSQLFDGLDDDEPSLTNGAFVPRKSIK
KLVLKNLNNSQYSSPLNKDSDDLASPSEYPQNGHSQVEDEELREFPGPSSRVDDDPEVTQ
FYVNPIAKPIPQGRAQLSLQDTISDLNMHKLPRNGLELSSDDVSGSLGEESLQEEREEEE
PQESQQPPHPAGIVLNRVGYYTIPSLEDLAEMIDENGECVVENFTIGRKGYGSIFFLGEV
NVTGLNLDEIVHFRRKEVIVYTDDKNKPPVGEGLNRRAEVTLDGVWPNDKTTCTQIRSPE
RLADMNYEGRLEKASRKQGARFLEYRPETGSWVFEVAHFSKYGLQDSDEDEDIPPKTDPK
KLKTMMSLPASQQQVAPQAQSTVVDLAGGVAELDSDMADITQSLPTESMLGADDDGELPA
ADMDAVEHDGVSASSHIASSLGINPHTLQIMKASLFTEEEEEADMFHRHGAAKGSDVSSP
HLVLPGAQSRPSVGGLLQVRFTSSLLPQLLDSPRPPPSLSRGAPVAADPSRSLKWKVPGP
ASFLLPARAPEPPIRTVGVRRLGGPVPLKESVTRGKGGLLMDTGLFATRSFRVGWGPGWT
LAHCGSRISSPQSKQLDYQDLCATTDFSFLPKPARTKPLTESPYKVVLEQLAGLDLPQGK
LGDEEDSQAVLQRPLEICLKNSTVSVPDGTACPVVRPQAGVAALHQYAEWITELNAKRGG
AEPLLGDWAEVWTLCEALWGQSGPSDQELDTEPLGDYEQQLQRRRTFSTWLSRGASCRVE
EEVGLSGKGRHTDAIFSFLTGGRISEACRLAQKEGDHRLSLLLSQAVGSQFCRDLLALQL
ADWNRMQTDRYLSEERLRIFALLAGKPVWQSSDSAVNVCSELDWKRCIGVHLWFMLPPTA
SVADALARYEAAFQGSTEAGKYACTPLPPYLEETQPDEEEEEESGRPLYDLCFHLLKLYS
DRHYGLQQLLEPLAVTWQRLDYRLSWHLWGVLQALCYSHLSASRQGLLHTSYAAQLESTG
LWHMAVFILLHIPDHSQRERAVREVLTQHCPLQETEESVRRESFLTEQLRVPEPWIHEAK
ATRAQRDGDRHLQALHLYRARHWNRCHRLLIQHLASDCIINDNHDYLLDFLEGLAVPERS
ATIQDWDTAGRVYLDYIRVIKSLQVIQQMETGGYELERLYSDVTSLCSRIELLPCSSARD
RLAQSEMAKRVANILRVVLSLQQSEATPDPLSIPLTQLAPHISRLPMPEDYTLEELRGLT
QSYLRQLVVGQ
NT seq
5436 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacaactcatttggtactcccttcggtggggggacaggggggttcagctcgtca
tcaacctttggtcagcagaacacgagttttgggacagcgggagggtttgggacgtctgcg
tttggagcgaccaccaacacaggaggactgtttggatccacacagaacaaacctggcggt
ctgtttgggtccagtacgttcagccagccggcgacttcctccaccagcaccggcttcggt
ttcggtgcagccagcggcacctccaccagcctgtttggaaacaccggggcgggggccacc
agcgggctcttctcccagccgaccaatgcatttggagccaacaaacccacctcgtttgga
agcttcgggacgagcaccagcggcggcgctggcctgtttggctccaccaacaccacctcc
aacccctttggtggctccagctctctgttcggaggctccgggttctcggcctctcagcag
ccaggaacaaccgtgaaattcaatccaataacaggaagtgacaccatggtgaaggcaggt
gtgaccacgagcatcaacaccaaacaccagtgcatcacagccatgaaggagtacgagaac
aaatctctggaggagctcaggctggaggactaccaggcaggaaggaagggtcccgccaac
ccgatggctccggggaccggcggtctgtttggtggcgccacggccacgtccagcgccgcc
acgggccttttcggctctgctgcccccaacacaaacttcaacttcgggccgaataagacc
acgtttggagcgacagctacaggaaccttcggacccaccacagccggtctgttcggacag
caaacccagccgccggctggcagcctcttcaagcccttcgggtcaaccacgacgacccag
agcaccggtttcaccttcggtaacaccaacaccatgggtcagcccaacaccagcagcatc
ggtctgttcggaaacacggcggcgtctcagcccggcgggttgttcgggccgacccagacc
agcaccgccactgggtttgggacggcctcgggtctgttcggacagcccaatgccgcgttt
ggaaccgttggagcgcagcagagtttatttggaaataaaacggctggcttcggcaccacc
accaccagcgcctcgtccttcggcgccggcaccgggctctttggcaacaagcccgctctg
accctgggaaccggaaccaacacctccaccttcggattcggagcgaaccctgcaggagga
ggtctgtttgggaacaaggcgaccaccggagggctgggaaccggactgggaaccagcttt
ggaaccgttggtaccggtccgagtctgtttggaaccaaccagaacaaactgggcaccaca
ctgggaacgatgggaacgttcggaaccgcaggattcaacagcggaaccagcagcttggga
ttcggagctccgcagcagcagcctgttgctctcacggatccgaacgccaacgcggcgcag
caggccatcctccagcagcagctgaacgtcctggcctactcgccgtacggagactcgccg
ctgttcagaaacccgctgtccgacccgaagaaggaggagcgtctgaaaccgaccaatccc
acggcccaaaaggctctgaccacgcccactcactataaactgaccccgcgacctgcgacc
cgggttcggcccaaagcgctcacatcttccggaggatccaagtcgcagctctttgacggt
ctggacgacgacgagccgtcgctcaccaacggagccttcgtacccagaaagagcatcaag
aaacttgttctgaagaacctgaacaacagtcagtacagcagcccgctgaacaaagacagc
gacgacctcgcctcgccgtcagagtatcctcagaacggacacagccaagtggaggacgag
gagctccgggagtttccgggtccgagtagccgggtcgacgacgacccagaagtcactcag
ttctacgtcaaccccattgccaagccgatcccgcagggccgagcccagctgagcctgcag
gacaccatcagtgacctgaacatgcacaaactgccacggaacggcctggagctgagcagc
gacgatgtgtcggggtctttgggggaggagtctctgcaggaggagagggaggaggaggag
ccacaggagtcccagcagccgcctcatcctgcaggaatcgttctgaaccgggtcggttac
tacaccatcccctccctggaggatctggctgagatgattgatgaaaacggagagtgtgtc
gtggaaaacttcaccattggcaggaaaggctacggatccatcttcttccttggtgaggtg
aacgttacgggcctgaacctcgacgagattgtccacttcagacgcaaagaggtcatcgtc
tacacggacgacaaaaacaagccaccggtgggggaggggcttaacaggcgtgccgaggtg
actctggacggcgtttggccgaacgataaaacgacctgcactcagatccggagccccgag
cgtctggccgacatgaactacgaaggccggctggagaaggcttccaggaaacagggcgcc
cgtttcctggagtaccgacctgagaccggctcctgggtgttcgaggtggcccatttctct
aaatacggcctccaggactccgacgaggacgaagacatcccgcccaaaactgaccccaag
aagctgaaaacgatgatgtcacttcctgcctctcagcagcaggtggcgccgcaggctcag
tccaccgttgtggatctggcgggtggcgtggcggaactggacagcgacatggccgacatc
actcagagcctcccgacagagagcatgctgggagcggatgacgacggcgagctgccggcg
gcggacatggacgcggtggagcacgacggcgtctcggcgtccagccacatcgcctcgtct
ctggggatcaacccgcacaccctgcagatcatgaaggcgtctctgttcaccgaggaagag
gaggaggccgacatgttccaccgccacggagcggcgaagggctcagatgtctcgtctcct
cacctggtcctgccgggggctcagagtcgaccctcagttggaggcctccttcaggtccgc
ttcacctccagcctcctccctcagctgttggactctcctcgcccccctccctctctgtcc
cggggggctccggtggcggccgacccctcccgctccctgaagtggaaggttccgggtcct
gcctccttcctgctgcctgctcgggctccagaacctccgatcaggaccgtgggagtccgg
cggctggggggtcccgtccctctgaaagagtcagtgactcgggggaaggggggcctgctg
atggacacggggctgtttgccacccgctccttcagggtgggctgggggcccggctggact
ctggctcactgcggcagccggatcagctcgccacagtccaaacagctggactaccaggac
ctctgcgccacgacggacttcagcttccttccgaaaccggccaggaccaaaccactgact
gaaagtccctacaaggtggttctggagcagctggcgggtctggacctccctcaggggaaa
ctcggggacgaggaggacagccaggccgtactgcagcgccccctggagatctgtctgaag
aacagcaccgtcagcgtcccggacggaaccgcctgccccgtggtgcgaccgcaggctggc
gtggcggcgctgcaccagtacgcagagtggatcactgagctgaacgccaagcggggcggc
gccgagcccctcctgggtgactgggccgaggtctggaccctctgtgaggccctctggggc
cagtcagggccctcggaccaggagctggacaccgagccgctcggcgactacgagcagcag
ctgcagaggaggcgcaccttctccacctggctgtcccgcggcgcctcctgcagggtggag
gaggaggtgggtctgtcggggaaaggtcgccacacggacgccatcttcagcttcctgacg
ggcgggcgcatcagcgaggcgtgtcggcttgcccagaaagaaggagaccaccgtctgtcc
ctgctgctgtctcaggccgtgggctctcagttctgcagagacctcctggccctgcagctg
gcagactggaaccgcatgcagacggaccgctacctgagtgaggagcggcttcggatcttc
gctctgctggctggaaaacctgtctggcagtcctcggactcggcggtgaacgtgtgctcg
gagctggactggaagcgctgcattggcgtccatctttggttcatgttgcctccgacggcg
tctgtggccgacgccctcgccagatacgaagctgccttccagggatccacagaggcaggg
aagtacgcctgcacccccctccctccttacctggaggagacgcagcccgatgaagaggag
gaggaggagtccggacggccgctgtacgacttgtgcttccacctgctgaagctctacagc
gacagacactacggcctgcagcagctgctcgagccgctcgccgtcacctggcagcgcctg
gattatcgcctcagctggcacttgtggggcgtcctgcaggcgctgtgctacagccacctg
agcgcctcgcgccagggcctcctccacaccagctacgccgcccagctggagagcaccgga
ctctggcacatggccgtcttcatcctgctgcacatccccgaccacagccagcgggagcga
gctgtgagggaggtgctgactcagcactgccccctgcaggagacagaggagtctgtccgc
agggagagcttcctgaccgagcagctgcgggtcccggagccgtggatccacgaggccaag
gccacccgggcccagagagacggggaccgacacctgcaggctctgcacttgtaccgggcc
agacactggaaccggtgccaccggctgctgatccagcacctggcctcagattgcatcatc
aacgacaaccacgactacctgctggacttcctggagggactggcggtccctgaacgcagc
gccaccatccaggactgggacacggcggggagggtttacctggactacatccgggtcatc
aagtctctgcaggtcatccagcagatggagacggggggttacgagctggagcgtctctac
tctgatgtcacgtctctctgcagccggatcgagctgctgccctgcagctccgccagagac
cgcctcgcccaatcagagatggcgaagcgcgtggcgaacatcctgcgggtggtcctgagc
ctgcagcagagcgaggcgacccctgaccccctcagcatcccgctgacccagctggcgccg
cacatcagccgcctgccgatgccggaggactacacgctggaggagctgcggggcctcacg
cagtcctacctgcggcagctcgtggtcggccaatga
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integrated database retrieval system
