Kryptolebias marmoratus (mangrove rivulus): 108251121
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Entry
108251121 CDS
T05608
Symbol
exosc6
Name
(RefSeq) exosome complex component MTR3 isoform X1
KO
K12587
exosome complex component MTR3
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108251121 (exosc6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kmr03019
]
108251121 (exosc6)
Messenger RNA biogenesis [BR:
kmr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
108251121 (exosc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
108251121
NCBI-ProteinID:
XP_017296796
UniProt:
A0A3Q3FJD9
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Position
LG11:complement(26288346..26290014)
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AA seq
269 aa
AA seq
DB search
MPTDTKRVRGPEVSQSPVLFGCRPAAVLPSHGPRADGRQRDQADVRPVFVRCGLVSQANG
SAYMEAGSTKLMCCVYGPRETERKDETDMKCGRLTTDMRLAPFSCPVRGSWIQGTQDKDL
SLMLYESLQPAVCLQKYPRSQIEVSVMVLENSGSVLAHAVTCASLALADAGIEMYDLVLG
CSLCQDAGSYVVDPTYAEETSCGSGGGLTVAFLPSLNQISGLQSDGEMSEETLTAGVRTC
IEGCYKLYPVIQQALIQALRRAAPPPSES
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgccgactgatacgaagcgtgttcgcggccctgaagtgtctcagagcccggttctgttt
gggtgcaggccggctgcggttcttccctcgcacggcccccgagcggacggtcggcagcgg
gaccaggcggacgtccggccggtttttgtgcgctgcggcctggtgagtcaagctaacggc
tccgcgtacatggaggccggaagcaccaagctaatgtgctgcgtttacggaccgcgggag
accgagcggaaagatgagaccgatatgaaatgtggaaggctgaccaccgacatgcgtctg
gctccgttctcctgcccggtcaggggctcctggatccaggggacccaggacaaggacctg
tctctgatgctgtatgagagtctgcagccggccgtgtgcctccagaagtacccgcgctct
cagatcgaggtcagcgtcatggtcctggagaacagcggctcggttctggcccacgccgtc
acgtgcgcctccctggcgctggcggatgcagggattgagatgtacgatctggtgctgggc
tgctccctctgtcaggacgccggctcgtacgtggtggaccctacgtacgcggaggagacc
agctgcggctcaggcggcggtctgacggtggccttcctgcccagtctgaaccagatctct
gggctgcagtcggacggggagatgtccgaggagactctaactgcgggggttcggacctgc
attgaggggtgttacaaactgtacccggttatccaacaggctctgatccaagctctgcgc
cgggcggctccaccgccatcagagagctga
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