Kryptolebias marmoratus (mangrove rivulus): 108251132
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Entry
108251132 CDS
T05608
Symbol
strc1
Name
(RefSeq) uncharacterized protein strc1
KO
K24636
stereocilin
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
kmr03037
]
108251132 (strc1)
Cilium and associated proteins [BR:
kmr03037
]
Other cilia and associated proteins
Stereociliary proteins
108251132 (strc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Stereocilin
Motif
Other DBs
NCBI-GeneID:
108251132
NCBI-ProteinID:
XP_017296813
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All DBs
Position
LG15:complement(5835671..5858227)
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AA seq
2080 aa
AA seq
DB search
MWSAQAVCTVCILLGVICDVKLVNSQLKFISRNSNQPPAAVTKLEEDIQKVMDQIHSLPS
GNPRSSIDPSTGEVVDLNAYYSILNNLLGLVQPLLAGGFVDNLPRTLVCVLAGSEDCGLE
AELTKTVSLGLGQPLLALWSSVRSQSCSPLTAGGETTSSSLWTYLSEWDVMTTLLSSFQQ
TVLDVLESLSLSEEQAAFVNGLMDSFATYTLKILASILDGPVDYVNIALQFGIKVPSLDE
DETCGQGDLKQLIMWGLNHNVSWSLGLPFINILLEVWLPSDQSLYMFPEQNCQNPSTNTS
SPNINLTNLNFEVLCDPSSLATLNETVCADILLGSADGSSSSLLAFCQALSFLSSSQIEL
AWRNMCYMIEALVSPLASKSADCFEVAQPSPSATALYESPSAPVRVAREASNSQQLACNY
SSWTENGTWSAALVSLCRDSNRVDFVRHVCNNSLLMKKLLSDQMNVWLYGYCANSTSDPG
YLVSQFCVYQQWIDQLPQPVDSPLLGFCLSLDGPKLTTLICENTGFFMILLSNPDNWQLM
PNCSNVLPPQASTDPTIQLDSCKYSEWHDVMQITTDILTKCIRFDQSGFTKEVCSNKTFL
NNLLLNQNLAWVGDHCSTSLIFPPGPKPTQSFDLASWCDYETWGERQVDESIVAYCWQND
EQGFNHSVCCKQAVLEKLMENPQNRWLASVCTNMEIITVTPQICRYPDWSRPIIVDMTEV
ALCAEIDPINFASKVCANDTVLQNLMANQDNSWLIKYCNNSAIFTIGGGGQTVFKPTEQC
QYSKWTTSLPNALLLIQCWEQDQASFVLSVCPNAVLLRLLSLEPSKAWVTPMCKTYSNYT
GSVNGTAKPNNGTTTPLNNGTSTSPNNSTATPNNGTISPNNGTTSPNNGTTSPNNGTTTP
PNNGTTTTKPGYCLATNPMKQFNWICPNNFIFDCQPCLTQNMFMQTIVRCWVESMSFKMG
NLLTIPVTRVLDRAVSTAVVVMLAMEDITGPLWHVNATIRPSVLKSVADYLNQENNQDNK
RVLLQCFGKLLSGLLQTTRDLSTDDLLLVKEYFRLPLSSLRSVLASTSNSIVRLMLQYYA
GFKSSLQLSDQYLSTLVSALLQTHLTTDENLFPDLAPLLPAASPADIRSLPPVQRDNSVR
DIINSNLGSMNLAQQEAFGLWYSQVMSSNNITSGYQSLIRDTGNLIAYLPFQTFQHLSAA
QLLDGLDVLQKNTLTLIKQEFVANKLIGTYKNLTAQNFVTLGNLSCLADPNDLLAYQNSE
AFRVIQDNIMNCTLSGLSMPSQTISNFLLNNPELQVPSSLSAGRLSELAPLLPLLGVTFL
QGLTGSQLLAALPTLSSVPFTSAQASIIVDKLSSSNTLTPGLLQQLGFLIVGVKTETLLT
FTSDRLLAILKALSQNKQIHSLQYKCGLCPPDANAIATKLWGFSEVINWLNDVEPLLSCT
PLVSVLPRTRLLVQTLSNTTTKPWDTQQAQAIFTDLLKTNENLIKEDFLSLGTLGQGVSC
DVLRSRFQADPTASSVRKILALLRQQPGLLHTSLKKCVIDSLYEFKFFSELLQDLGVEIA
LSIPVRTVRKFPVDLIDTLRKMIVGEPRQFLLLSRTKQELLVDKIVQKMGMYTGTFTEAE
FRSMGIMAPFVVDEVFVQVERSFFVQNLSYLKGLCYGGGKMEIISRILMEPGVFGPVKNW
NQTTLSMVGRFLFFLPVDALQEISLPLMTVGRVEKLFLSQQEWERGDVGTLCLDQNEKKT
VFNKQQFVLQFFLGFLKINLVSQTPMVPTCEILHTTAPSAWTSSSLSSMSTSAFSNCLEL
MGHDPFLESYQRSEVLKKVKKLYGPVSSFSQSLIAQLGGIATELTAEELSVLRLTERRSI
SALGAVSTWNSRQLAALFTTVLNSTKKSPSQLDSSTLVALGYIVCGAKTTEIRSFNNVEF
SKAVLWLGQLKLSCSEEQMTALVELLTNSLAFGHMSSWDTNVFIEIGVLAAGLSDIAMSA
LVKAQIEGITTEAISIIPPDKFAVTFSQEKITMFSYEQAVAVSPQQIAALSEVQKTALAM
VLTPWEDNVLDSKGRLAGSAERHSSLSLVLGLPILLTVQF
NT seq
6243 nt
NT seq
+upstream
nt +downstream
nt
atgtggtcggctcaagctgtttgcacagtgtgcatcttacttggggttatatgtgacgtc
aagctggtgaactcacaactcaaattcatatcaagaaactccaaccagcctcctgctgcg
gtcacaaaattagaggaagacatccagaaagtcatggatcagatccactcacttcccagt
ggaaacccccgcagctcgatcgacccttccacaggggaggttgttgacctcaacgcatat
tacagcattctgaataaccttctgggcctcgttcaaccgctgctggcaggaggattcgtc
gacaaccttcccagaacgctggtttgtgtcctcgcaggcagcgaggactgtggcctggag
gcagagctgacgaagacggtgtccctggggttaggacagccactgctggccctgtggtca
tcggtcagatcccagagctgcagtccactgaccgccgggggagagacgacgagcagctcc
ctgtggacgtacctcagcgagtgggacgtgatgactacgctgttgagcagctttcagcag
acggttcttgatgtgctggagagtctttccctctctgaggagcaagcagcttttgtgaat
ggcctcatggattcttttgcgacatacacgttaaagatattggcatccattctggacgga
ccagtcgactatgtaaacatagccctacagtttggaattaaagtcccatctttggatgaa
gacgaaacctgtggacaaggagatctcaagcagctaattatgtggggactaaaccacaat
gtgagctggtctttgggtcttccattcatcaacatcctcctggaagtctggctgccctca
gatcagtcactgtacatgtttccggagcagaactgccagaatccttccactaacaccagc
tccccgaatattaacttgactaatctcaactttgaggttttgtgtgaccccagcagcctg
gccactctcaatgagacggtgtgtgctgacatcctcctgggttcagcagacggatcgtcc
tcgtctctgctggccttctgtcaggcactgagcttcctcagcagcagccagatagagctg
gcgtggaggaacatgtgttatatgattgaagctctggtgtccccgctcgcttccaagtca
gccgactgctttgaggtcgcgcagccctccccttccgccacagctctgtacgagtcgccc
tcggcacctgttcgagtggccagggaggcctcaaacagccaacagctggcctgcaactac
agcagctggactgagaacggcacgtggagcgctgctctcgtgtctctgtgccgcgacagc
aaccgcgtggacttcgtcaggcatgtttgcaacaactccttgttgatgaagaagctgctc
tcagaccagatgaacgtctggctgtatggatactgtgcgaactcgacttcagaccccgga
tacttggtgagccagttctgtgtgtaccagcagtggatcgaccagctccctcagcccgtg
gactcccccctgctggggttctgcctgagcctagatggtcccaaactgaccactctcatc
tgtgagaacactggattctttatgattctcctctccaacccagacaattggcagctaatg
cctaactgctcaaacgtcctccctcctcaggcgtccactgaccccacaatacagctggac
tcctgtaaatactccgagtggcacgacgtgatgcaaattaccaccgatattttgacaaag
tgcatccgctttgatcagagtggtttcacgaaggaggtctgctcgaacaaaacgtttctg
aacaaccttcttctgaatcaaaaccttgcgtgggttggggaccactgcagcacctccttg
atttttccaccaggcccgaagccgacccagtccttcgacctggcttcgtggtgtgactac
gagacgtggggagagcggcaggtggacgagtcaatcgtcgcctactgttggcaaaacgac
gagcagggctttaatcacagcgtctgctgcaaacaggccgtgcttgagaagctgatggaa
aaccctcagaaccggtggcttgcatccgtctgcacaaacatggagataataacggtcacg
ccgcagatttgcaggtaccctgactggagccgtcccatcatcgtggacatgactgaggtc
gctctctgcgctgagattgacccgattaacttcgcctccaaagtctgtgctaacgataca
gtcctccagaacctgatggcaaatcaggacaactcctggttaataaaatactgtaacaat
tcagccatttttactattggaggtgggggccagactgtgtttaaacccaccgagcagtgt
cagtactccaagtggaccacatctcttccaaatgcattacttctgattcagtgctgggag
caagaccaggccagttttgtgttatctgtgtgcccaaacgctgttctccttaggctgttg
tccctggagccgtctaaagcctgggtgaccccaatgtgtaagacctacagcaactacaca
gggtcagtcaacggcaccgcgaaacccaacaatggcaccacaacgccactcaacaatggc
acctcaacatcacccaacaacagcaccgcgacacccaacaatggcaccatttcacccaac
aacggcaccacttcacccaacaacggcaccacttcacccaacaacggcaccacaacgcca
cccaacaacggcaccaccacgacaaagcctggttattgtttggcaacaaacccaatgaaa
cagtttaactggatctgcccgaacaacttcatcttcgactgccagccgtgcctcactcag
aacatgttcatgcagacgatagtgcgctgttgggtggagagtatgagcttcaagatgggg
aatctgctgacaatacccgtgaccagggtgctggatcgagcagtcagcacagctgtggtg
gtcatgctggcaatggaggacatcacaggccctttatggcacgtcaacgccaccatcaga
ccaagtgtccttaaatctgtagccgactatttgaaccaagaaaacaaccaggacaataag
agggtgctgctgcagtgctttgggaaattactcagcggtttgctgcagacgacgagggac
ctgagcactgatgacctgctcctcgtcaaggagtacttcagactacctctgagcagcctg
aggtcagtgctggcttcaaccagtaacagcattgtcaggctgatgcttcagtactacgcc
ggttttaaaagctccctgcagctgtccgatcagtacctgtccaccctggtgtcggcgctt
ctccagacccacctgacaacagatgaaaacctcttccccgacctggcccccctgctgcct
gcagccagcccggctgacatccggtcgttgccgcctgtgcagagagacaacagcgtgcgg
gacatcattaacagcaacctgggcagcatgaacctggcccagcaggaggcgttcggcttg
tggtacagccaagtcatgtcctccaacaacatcacaagtggttaccagtccctcatcagg
gacacggggaacctgatcgcctacctgcccttccagaccttccaacacctctcagctgct
cagctgttagacggcttggatgtgttgcagaaaaacaccctcactttaataaaacaggag
tttgttgctaacaaacttatcgggacctacaagaacctgacggctcagaacttcgtgacg
ctgggtaatctctcatgcctggcagacccaaatgatctcctcgcgtaccaaaacagcgag
gccttccgggtcatccaggacaacattatgaactgcacgctctcaggactcagtatgccg
agccaaacgatttctaatttcctgctgaacaacccagagttgcaggtcccctcgtccctc
agtgccggccgactgtcagagctggcccccctgctgcccctgctgggtgtgacgttcctt
cagggtctcacagggtcgcagctgctcgctgccctcccgaccctcagctccgtcccgttt
acctcagcacaggcctccataattgtggacaagctgtcctcaagtaacacactgacccca
ggcctgctgcagcagctcggcttcctcattgtcggcgtgaagacggagaccttactgacc
ttcacctccgacagactgctggccatcctgaaggccctgtcccaaaacaaacaaatccac
agcctgcagtacaaatgtggcctctgtccaccagacgcaaacgccattgccaccaaacta
tggggtttctcggaggtcattaactggctgaacgacgtggaacctttgctcagttgcacg
ccgctggtcagcgtcctgcccaggactcgtctgctcgtgcagacgctctccaatacgacc
acaaagccctgggacacgcagcaggctcaagcgattttcacagatctgcttaaaactaat
gaaaatctaatcaaagaagattttctgagtctggggacgctgggtcagggagtgagctgc
gacgtcttacggagtcgtttccaggctgatccaactgcgtcttcagtgagaaaaatcctg
gccctcctcaggcagcagcctggtcttcttcacacctctctgaaaaagtgtgtgatcgat
agtctgtacgagtttaagtttttctcggagctgcttcaggatcttggggttgaaatcgct
ctgtccatcccagtgagaactgtcaggaagtttcctgtggatctgatagacactctgagg
aaaatgattgttggggaaccccgtcagtttctcctgctgtccagaactaaacaggaactt
ctggtggacaaaattgttcagaagatgggcatgtacacggggacgttcaccgaggccgag
ttccgatcaatggggattatggctccgtttgtggtggatgaagttttcgttcaggtggag
cgaagcttcttcgttcagaatctgagttacctgaaggggctctgctacggcggcggcaag
atggaaatcatctcccgtatcctgatggagcctggcgtctttggccccgtgaagaactgg
aaccagacgacactcagcatggtgggccgctttctcttcttcctgcctgtcgatgctctt
caagagatttctctgccgctgatgaccgtggggcgcgtagagaagctgttcctgagccag
caggagtgggagcgtggagacgtggggaccctctgcttagaccagaacgaaaagaagacc
gttttcaacaaacagcagttcgttctgcagtttttcctgggcttcctcaaaataaatctt
gtgtcacagactccgatggttcccacctgtgagatcctgcacaccacggctccatcggcc
tggacgtccagcagcctcagcagcatgtcgacatctgccttctccaactgtctggagctg
atgggccacgacccgttcctcgagtcctaccaacgcagtgaggttctgaagaaagtcaaa
aagctgtacggcccggtttccagcttctcccagtctctgatcgctcagcttggtggaata
gcgacagagctgacagcggaggagctgagcgttctccgactcacagagcggaggagcatt
agtgctctgggagccgttagtacctggaacagcagacagctggctgctctgtttaccacg
gtgttaaactccaccaagaagagtccgagccagctcgactccagcacgctggtggctctg
gggtacatcgtgtgcggcgctaagaccacagagatcaggtcttttaataatgtggagttc
agtaaggcggtgctctggcttggtcagctgaagctgtcctgctcggaggagcagatgacg
gctctggttgagctgctcaccaacagccttgcgtttggacacatgagttcatgggacacg
aatgtgttcattgagatcggagtcctggcagctggtctctcggacatcgccatgtcagct
ctggtgaaagcgcagattgaaggaattacaactgaggctatctcgataataccacctgac
aagtttgctgtgacttttagccaggaaaagatcaccatgttctcctacgagcaggctgta
gcagtgagtccgcagcagatcgccgccctgtcggaggttcagaagaccgctctagctatg
gtgctgactccctgggaggacaacgtgctggactccaaagggaggttagcggggtcagcg
gagcgccacagcagtctgtctctcgtcctgggactgccgatactgctgaccgtccagttc
tga
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