Kryptolebias marmoratus (mangrove rivulus): 108251137
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Entry
108251137 CDS
T05608
Symbol
eif4a3
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr03013
Nucleocytoplasmic transport
kmr03015
mRNA surveillance pathway
kmr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108251137 (eif4a3)
09122 Translation
03013 Nucleocytoplasmic transport
108251137 (eif4a3)
03015 mRNA surveillance pathway
108251137 (eif4a3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kmr03019
]
108251137 (eif4a3)
03041 Spliceosome [BR:
kmr03041
]
108251137 (eif4a3)
03009 Ribosome biogenesis [BR:
kmr03009
]
108251137 (eif4a3)
03012 Translation factors [BR:
kmr03012
]
108251137 (eif4a3)
Enzymes [BR:
kmr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
108251137 (eif4a3)
Messenger RNA biogenesis [BR:
kmr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
108251137 (eif4a3)
mRNA cycle factors
Stress granule specific factors
108251137 (eif4a3)
Spliceosome [BR:
kmr03041
]
Complex C
Other components
EJC/TREX
108251137 (eif4a3)
Ribosome biogenesis [BR:
kmr03009
]
Eukaryotic type
90S particles
Helicases
108251137 (eif4a3)
Translation factors [BR:
kmr03012
]
Eukaryotic type
Initiation factors
eIF-4
108251137 (eif4a3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
Cas3-like_C_2
AAA_30
TniB
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
108251137
NCBI-ProteinID:
XP_017296816
LinkDB
All DBs
Position
LG3:30155802..30162720
Genome browser
AA seq
406 aa
AA seq
DB search
MATAGAQGRKRIMKEEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQ
QRAIKQIIKGRDVIAQSQSGTGKTATFCISVLQCLDIQVRETQALILAPTRELAGQIQKV
LLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLV
LDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRILVKRDE
LTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVS
SMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRI
GRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggctacagccggggcacagggcaggaagagaatcatgaaggaggaggacatgaccaag
gtagagtttgagaccagcgaggaggtggacgtcactcccaccttcgacacgatgggactg
cgagaagacctacttcgcgggatctacgcctacgggttcgagaagccgtcggccattcag
cagagagccatcaaacagatcatcaaaggccgagacgtcatcgctcagtctcagtctgga
acaggaaagacggcaaccttctgtatctcggtgctgcagtgtctcgacatccaggtgagg
gagacacaagctctgatcctcgctccaaccagagagctggctggacagattcagaaggtc
ctgctggccctgggagactacatgaacgtccagtgtcacgcctgtattggaggcaccaac
gtgggcgaggacatccgaaagctggactacggtcaacacgtggtggccggcacacctggg
cgcgtgttcgacatgattcgccgcaggagtctcaggacgagagccatcaagatgttggtc
ttggacgaagctgacgagatgctcaacaaaggtttcaaggagcaaatttatgacgtgtac
cggtacctgcctccggccacccaggtggttttgatcagtgccacgctgccacacgagatt
ctggagatgaccaacaagtttatgaccgacccgatccgcatcctagtcaaacgtgatgag
ctgactctggagggcatcaaacagttcttcgttgctgttgagagggaggagtggaagttt
gacactctgtgtgatctttacgacactctgaccatcacacaggctgtcatcttctgcaac
accaagaggaaggtggactggctgactgagaagatgagagaagccaactttacggtgtcc
tcgatgcacggagacatgccgcagaaagaacgagagtccatcatgaaggagttcagatct
ggagccagtcgcgtcctgatttctacggacgtttgggctcgaggtttggacgtcccacag
gtttccctcatcatcaactacgacctgccgaacaaccgagagctctacatccacagaatc
ggtcgttcgggtcggtatggcaggaagggcgtggccatcaactttgtgaagaacgatgac
atcaggatcctgcgagacatcgagcagtactactccacccagatcgatgagatgcccatg
aacgtggctgacctgatctaa
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