Kryptolebias marmoratus (mangrove rivulus): 108251417
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Entry
108251417 CDS
T05608
Symbol
thbs3a
Name
(RefSeq) thrombospondin-3a isoform X2
KO
K04659
thrombospondin 2/3/4/5
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr04145
Phagosome
kmr04510
Focal adhesion
kmr04512
ECM-receptor interaction
kmr04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
108251417 (thbs3a)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
108251417 (thbs3a)
09144 Cellular community - eukaryotes
04510 Focal adhesion
108251417 (thbs3a)
09142 Cell motility
04820 Cytoskeleton in muscle cells
108251417 (thbs3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
kmr04131
]
108251417 (thbs3a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
kmr04147
]
108251417 (thbs3a)
00536 Glycosaminoglycan binding proteins [BR:
kmr00536
]
108251417 (thbs3a)
Membrane trafficking [BR:
kmr04131
]
Endocytosis
Phagocytosis
Opsonins
108251417 (thbs3a)
Exosome [BR:
kmr04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
108251417 (thbs3a)
Exosomal proteins of colorectal cancer cells
108251417 (thbs3a)
Exosomal proteins of bladder cancer cells
108251417 (thbs3a)
Glycosaminoglycan binding proteins [BR:
kmr00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
108251417 (thbs3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
COMP
EGF_CA
EGF_3
EGF_MSP1_1
EGF
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
108251417
NCBI-ProteinID:
XP_017297208
LinkDB
All DBs
Position
LG16:539784..552047
Genome browser
AA seq
951 aa
AA seq
DB search
MARSFPVLLSIICVHLTAGVPDGTEVQVIDVLSLQDSKQSAAAVEKLSGALSTLSDVYLV
STFRLPPKLGGVLFGLYSKRDNRKYLEVAVMGKINKVLVRYVKADGKLHTVNLQNSNLAD
GRSHSVIVRLAGLQRSSMQAELYVDCRLADSGQGLPPLVPLPMEVETVDIRHGQKSYARL
QGAVESLRLALGGSVANAGALTDCPFQGDASVYNSVNGELHSILGEHTKALIGQLIIFNQ
ILGELRQDIREQVKEMSLIRNTILECQVCGFHEPRSRCSPNPCYKGVSCMDSLQYPGYTC
GPCPPGTTGNGTHCRDVDECELQPCYAPEACLNTVGGFSCKPCPPGLWGAPLAGTGLDYA
KSNKQECVDIDECIDLPDACVSNSVCINTVGSYKCGGCKPGFHGNQTSGCFPRKSCSALT
FNPCDSHAHCTMERNGEVSCRCNVGWAGNGHTCGMDTDIDGYPDRSLPCMDNNKHCKQDN
CVLTPNSGQEDADNDGIGDQCDEDADGDGIKNVEDNCRLVANKDQQNSDSDSFGDSCDNC
PTVSNSDQKDTDNNGQGDACDQDIDGDGIPNVLDNCPKVPNPMQTDRDRDGVGDACDSCP
ELSNPMQTDVDNDLVGDVCDTNQDTDGDGHQDTRDNCPDIPNSSQLDSDNDGLGDDCDHD
DDNDGVLDDFDNCRLIINPNQKDSDANGVGDVCENDFDNDAVMDQVDVCPESAEVTLTDF
RAYQTVVLDPEGDAQIDPNWVVLNQGMEIVQTMNSDPGLAVGYTAFNGVDFEGTFHVNTV
TDDDYAGFIFGYQDSSSFYVVMWKQTQQLYWQNLPFRATAQPALQLKAVKSRTGPGEFLR
NALWHTGDTQGEVKLLWKDPRNIGWKDKTSYRWQLSHRPQVGYIRVKLFEGTDMVADSEV
VIDTTMRGGRLGVFCFSQENIIWSNLRYRCNDTVPEDFKSHRKQVMMHIQV
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atggctcggagtttcccggttctgctgtcaatcatctgtgtccatctcacggcgggagtc
ccggacggaaccgaagtccaagtgatcgacgtcctgagtctccaggactccaagcagagc
gcggcggcggtggagaagctgtcgggcgctctgagcacgctcagtgacgtctacctggtg
tcgacgttccggctgccgcccaagctgggcggggttctgtttggtctctacagcaagcgg
gacaacaggaagtacctggaggtcgccgtcatggggaagatcaacaaagttctggtccgg
tacgtgaaggctgacgggaagctgcacaccgtcaacctgcagaactccaacctggccgac
ggtcggagccactccgtcatcgtgaggctcgccggcctccagcgcagcagcatgcaggca
gagctctacgtcgactgccgattggccgactccggtcagggcctgccgccattggtccct
ctgcccatggaggtggagacggtggacatcagacacggacagaagtcttacgcccgactg
cagggggcggtggagtccctccgcctggctctagggggcagcgtagctaacgctggcgct
ctgactgactgtcccttccagggagacgcgtccgtctacaactcagtgaacggggagctg
cactccatcctgggtgagcacacgaaggctctgattggtcagctcatcatcttcaaccag
atcctgggagagctgcggcaggacatcagagaacaggtgaaggagatgtctctgatcagg
aacaccatcctggagtgtcaggtttgtggtttccacgagcctcgttcccgctgctctccc
aacccgtgctacaaaggtgtgtcctgcatggacagtctgcagtaccctggatacacctgt
ggaccgtgtcctcctggaaccaccgggaacgggacgcactgcagggacgtagacgagtgt
gagctgcagccctgctacgctcctgaagcctgcctgaacacggtgggggggttcagctgt
aaaccctgtcctccaggcctgtggggggcgccgctggctggaacgggactggactatgcc
aagtccaacaaacaggaatgtgtggacattgatgagtgcatcgatcttcctgacgcctgc
gtctcaaactctgtctgcatcaacactgtggggtcctacaaatgtggaggctgtaaaccc
ggtttccatggcaaccaaacatcaggctgcttccccaggaagtcgtgctcggcgttgacc
tttaacccctgtgacagccacgcccactgcaccatggagaggaacggagaggtgtcctgc
aggtgtaacgtgggctgggctggaaacggacacacgtgtgggatggacacggacattgac
ggttacccggaccggtctctgccttgtatggacaacaataaacactgcaaacaggacaac
tgtgtcctcactccaaactccggtcaggaggacgccgacaacgacgggatcggagaccag
tgtgacgaggacgcagacggagacggcatcaaaaacgtggaggataactgccggttggtc
gccaacaaagaccagcagaactcggacagcgactcgttcggagactcgtgtgacaactgt
cccaccgtgtccaacagcgaccagaaagacacggacaacaacggacagggagacgcctgc
gaccaggacatcgatggagacggtattcccaacgttctggataactgtccgaaggtcccg
aacccgatgcagacggacagagacagggacggagtcggagacgcctgcgacagctgtcct
gagctcagcaaccccatgcagacggacgtggacaacgacctggtgggagacgtttgtgac
accaaccaggacacggacggagacggacaccaggacaccagagacaactgtcccgacatc
cccaacagctcccagctggactcggacaacgatggcctgggagacgactgcgaccacgac
gacgacaacgacggcgtcctggacgacttcgacaactgcagactcatcatcaacccaaac
cagaaggactcagacgccaacggcgtgggagacgtctgtgagaacgacttcgataacgac
gcagtgatggatcaggtggacgtgtgtccggagagcgccgaggtcacgctgacggacttc
agggcctatcagacggtggtcctggaccctgagggcgacgcccagattgacccaaactgg
gtggttctgaatcagggtatggagatcgtccagacgatgaacagtgatcctggtctggca
gttggctacacggcatttaacggcgtcgacttcgagggaacgtttcacgtgaacacggtg
accgacgacgactacgccggcttcatcttcggctaccaggactcgtccagcttctacgtg
gtgatgtggaaacagacgcagcagctgtactggcagaacctgcccttcagagccacggcc
caacccgccctgcagctcaaggcggtgaagtccagaaccggaccgggggagtttctgagg
aacgccctgtggcacaccggagacacacagggggaggtgaagctgctctggaaggaccct
cgaaacatcggctggaaggacaaaacctcgtaccgctggcagctcagccaccggccgcag
gtgggatacatcagggtgaagctgtttgagggaaccgacatggtggcggactctgaagtc
gtcatcgacacgacgatgagaggaggacggctcggggtcttctgcttctcccaggagaac
atcatctggtccaacctgcgctacaggtgtaacgacacggtgcctgaagacttcaagtct
catcgtaaacaagtcatgatgcacatccaggtgtga
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