Kryptolebias marmoratus (mangrove rivulus): 108251448
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Entry
108251448 CDS
T05608
Symbol
lama1
Name
(RefSeq) laminin subunit alpha-1
KO
K05637
laminin, alpha 1/2
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr04510
Focal adhesion
kmr04512
ECM-receptor interaction
kmr04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
108251448 (lama1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
108251448 (lama1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
108251448 (lama1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_EGF
Laminin_G_1
Laminin_G_2
Laminin_B
Laminin_N
Laminin_II
Laminin_I
Laminin_G_3
Transcrip_act
Motif
Other DBs
NCBI-GeneID:
108251448
NCBI-ProteinID:
XP_037830349
LinkDB
All DBs
Position
Unknown
AA seq
2905 aa
AA seq
DB search
MQLLLLLFLMQQAAAQQRGLFPAIFNLATNAEISSNATCGDPEPEVYCKLVEHVPGRRIK
NSQCPRCDANSVLSKERHPITNAIDGTNQWWQSPSIKNGHQFHWITITLDLKQVFQVAYI
IIKAANSPRPGNWILEHSLDGVTFDPWQFYAINDLECLSHYNITPRLGPPTYRSDTEVIC
TSYYSRLNPLEHGEIHTSLINGRPGADNLTPDLLNFTSARYIRLRLQRIRTLNADLMTLS
THDPQDIDPIVTRRYYYSLKDISVGGMCICYGHAQRCPLDLVTKKLQCVCEHNTCGENCN
ECCPGYHQLPWKPGTISEGNTCEKCNCHNKALDCFYNQTVSELSLSRNTRGLYKGGGVCI
NCQQNTDGVNCETCKDGYYKPTEVSPYSDFPCVECKCDPRGSKSPVCSRDDSQPGQCECK
DGFTGQQCDHCAFGYRDFPHCVHCECNPAGSTNSDPCSPCTCKVNVMGVHCDLCKQGFYN
LQESNILGCTDCFCFGVSDVCESSGWATAQVIFTDGILYPPNSLQIPHVYVNDLLIPSNT
SSGRDHQQVLWWVAPKTFIGSKLVSYGGFLSFSVVYDIPLDNKDQSLPAHCDVLIEGNGR
ALRLLSPLLLFLSPLAEKMVAVAMLPQHFVDDQSGTRVNRDDLLLVLTDITSLLVTLHLN
TSAEGQIRLSSVSLDFADSGSGSGIQAVAVELCECPWGYSGTSCEACHSGFYRVGGVLFG
GNCMQCECNNHSTECNIHGVCVGCIHNTTGPHCDQCFPGFYGNATEGTMDDCQLCPCPLT
EPSNSFSPTCVLEQSGQVSCDQCQPGYTGTNCERCASGFYGNPQVVGGACLRCECNGNIN
VSETGYCDIVTGDCLHCLGNTAGRHCEVCRPGYYGDAVHANDCKECGCDVSGAISTMCDV
KSGQCLCRENVTGRTCERCQSSFFGLQSGYGCQPCGCIQSASISESCDEEGQCQCIEGVA
GDKCDRCRRGYYGYHGDGCRACNCDHTGGNCDPENGKCVCPPQTEGDTCNRCKTGYWGHN
LTTGCKPCSCSATGSFTHQCDLLSGQCLCKDGFSGRSCDQCASGYHSYPSCSACGCDIAG
TNEKFCNTTLNICECRHTGQCVCKLGVSGQHCEECVFGWFGLSAENPDGCSPCFCSGLSQ
NCEEQGGLTRVPIIVGQSPAFPSLVSLSNPWGVGSGVYQQRDEMLLDARQLNASGLSGPL
YWRLPALFEGVQLLSYGGLLSYIITFYAEDGSGLSNQEPQVLMRGGTLEKHIIYTDMVAP
RNRIRTQHNIRLTEHKWRYFNSVSQKAVSHNDFMSVLSNIQYIIIKASYGTELLQSRISN
ITMETAVKAESGDSTEKARLIESCLCPPGYTGLSCQDCAAGYFRQPQSELSLQSQKLMLV
RPCIQCRCNNQSEICDPETGDCQNCQHHTSGQHCELCAPGYYMNISGCSLCACPLQDNSF
SPTCATEGVVGDFRCTSCQTGYEGRHCERCAVGYYGNPSFPGGGCLQCGCSGWGSLHPKC
DELTGYCECKAGVRGQLCDRCDERHVLQWRECVSCNDSCTGVLLEDLDKLQNNYFSVNKS
NFIMAPYWQLVLLENQTRNLEAEIYLNRSLTSHLSRVDDDLNHVTSDLGSLLHQVGRQSE
NLVELDISTNNSLSHGALLLENISSLQDSIQELQKVARLVNRTTQEKLTSANQMHLLEEL
ESMLQTIRSVNLTAAKSAANQELGFSESLIDTLQGDIPSRHSENENRLCFLITSLNVTTT
TLQHAAIELRKAAQLNTEMDHLLDVVETQLHQYQSFHQNLSLEFLSMDELMVDSQLLLED
TMSLTEEFTNSSTVELLASQLDQWPLLLRRHVDALVVGLIMTDALKNVYRAENHTQELQR
DAHSLHSYMMVVCNMSHNTSQLAQLDDDITEHVNSAHKVTLVALTSASLAVNMTGQSKQV
LSEESRAKMNISSAVLDESQKINYMAEDLQLNVTIVTTRLQLVRDCVFNFSLLLNQPTKE
LQTLPNGSFTSLQQALDQTATARSRIKVLLLPLQRLKEQLQVSSFVVENTNNTVRETNRL
MAHTQIAVNEAQQKLEDAEHRTQSMMEKIKPLNMLEDTLKKNLSNIRELIDQARKQAALI
KVAVQADRDCIRSYRPQIQSRNFNTLSLILKTSSPDNLLFYLGSNTTVDFLAVEMHDGKA
FLLWNVGSGTTRLEFPGTHISNNRWTRINATRIGAHGALSVHQLDSELAPRPAVTKTSPG
TSKVLDINRNTVIYVGGLGAHTQIPAGLQSSTFQGCLGEAVLDETNIGLWNYNSQEGKCG
GCFSSPQAEETSFHFDGSGFSVVYKSLRATSTSIVLLFKTLSPGGLLLYLASNNMSDFLS
LELVEGHVRLNFDLGSGALIQTSNRKYNTGVWYKITLQRNKQKGYLSIMAADQSSDKEVM
EAESPGTASSLNRSDLDPIYIGGLPFSTPISQQVVSRFYVGCIKDVEIARSNFDLLRDAY
GVQKGCVLMAVRSVSMLPGGFVQITPPSFSQEVELFLTFFSNNQSGLLLAVFGENQAHRQ
YFLSVHLISGAIEVEFGDVDGATWMVTVMKSDGGSFSEGRKHSVIVSINRKSLSLQVDEE
HLKSVPLMSGGLSQLSPFSLFIGGVPPEEKIHLPTRLRALSRSFTGCIQHLVMDKMLVDL
SAAVRYEGAELNSCLLEDRARGAMLPENQDIDPTSDSAYLPSAQPTHLSVLTPQTLMCVS
EENPTFLPSAAQFGSSRHSHMTFIINPSTVRKRVSVRLVLRSRALEGVIILLSGSKLTDF
VALNLKEGRVRFSADLGKGPASITSSVVINDGEWHTVSAEVSRRLVWVSVDGSRRESISI
KGNQLDVDKRLYLGGLPRGVSSRRINVSSSFPGCVQSISLNGAMLDLSKANSKLGVSSCF
TKDRAGSYFNGSGYAELMHDGYKVG
NT seq
8716 nt
NT seq
+upstream
nt +downstream
nt
atgcaacttctgctgctgctgtttctaatgcagcaagctgcagctcaacagagaggactt
ttcccagctatctttaacctggccaccaatgcagagatcagcagcaatgccacatgtgga
gatccagaaccagaagtttactgtaaactggttgaacatgttccgggccgaagaatcaaa
aactcacagtgccccagatgtgatgccaactctgtcctgtccaaagaacgtcatccgatc
acaaatgccattgatggaaccaatcagtggtggcagagtccaagtatcaagaatggacac
cagtttcattggatcactattaccctggatctgaaacaggtttttcaggttgcttacatc
ataatcaaagcagccaactctccacgaccaggtaattggattctggaacactctctggat
ggagtgacctttgacccctggcagttttatgccatcaatgatttggagtgtttgtctcat
tacaacataacgcctagacttggaccacccacatataggagcgacaccgaggtcatatgt
acatcttactactctaggctaaacccgctggagcacggagagatccacacttccctgatt
aacggacggcccggagctgataatttgacccctgatctgctgaactttacatcagctcgt
tacataagactgagacttcagcgaatcagaacactcaatgctgatctgatgacattaagc
actcatgacccacaagacattgacccaattgtgaccaggaggtattactactccctcaag
gatatttctgtgggtgggatgtgcatctgctatgggcatgcccagagatgcccattggat
ctggttaccaaaaagctacagtgtgtatgtgagcacaacacctgtggagaaaattgcaat
gagtgctgccctggttaccaccagctgccttggaaaccaggaactatctctgagggaaac
acgtgtgaaaagtgcaactgtcacaacaaagccctagactgtttttacaaccagacggtt
tctgaactctctttgagtaggaacacccgcggtctttataaaggaggtggagtatgtatc
aactgtcagcaaaatacagatggtgtcaactgtgagacctgcaaggacggatactacaaa
cccactgaggtgtctccgtactcagacttcccatgtgttgagtgtaagtgtgatccaaga
ggatcaaagtccccagtctgcagcagagatgactcacaaccaggtcagtgtgagtgtaaa
gacggtttcacaggtcaacagtgtgatcattgtgcatttggataccgagattttccccat
tgtgttcactgtgagtgtaacccagcaggtagcaccaactctgacccctgcagcccctgc
acctgcaaggtgaatgtgatgggagtccactgtgatctatgtaaacaagggttttacaac
ttacaggaaagcaacattcttggctgtacagactgtttttgttttggtgtttctgatgtc
tgtgagagttctggctgggccacagctcaggttatttttacagatggaatactttatccg
cccaattctctccaaatcccgcatgtttatgtaaatgaccttctaatccccagtaacact
tcctctggcagagaccaccaacaggtgctgtggtgggtggcacctaaaactttcatcggc
agcaagctggtgtcttatggaggctttctcagtttttctgtggtttatgacatcccattg
gacaacaaagaccagtctctgccagcccactgtgatgtcctcattgagggcaatggtcga
gctcttcgtctcttgtctcctcttctcctcttcctctccccactggctgaaaaaatggtg
gctgtggcaatgcttcctcagcattttgtagatgatcaaagtggcactagagtgaatcgt
gatgatctgctgttagtgctgactgacataacatcactgttggttacacttcatctgaac
acctcggctgaaggacaaatacggctcagctcagtctctcttgactttgcagattctggc
tcaggttctggcattcaggctgttgctgtggaactgtgtgaatgtccgtggggttacagt
ggcacttcctgtgaggcatgtcattcggggttttacagagtgggtggtgttttgtttgga
ggaaattgtatgcagtgtgaatgtaacaatcattccacagagtgcaatatccatggagtc
tgtgtgggctgcatccataacaccactggtcctcactgtgatcagtgctttcctggtttc
tatggcaatgcaacagagggaacaatggatgactgtcagttgtgcccatgtcctttaaca
gaaccgtccaacagtttcagtcccacctgtgtgctggagcagtctggtcaggtgtcatgt
gatcagtgtcagcctggttacactgggacaaactgtgagaggtgtgccagtggattctat
ggtaatccacaggtagtgggcggagcctgtcttcgctgtgagtgtaatggtaacattaat
gtcagtgagacgggatactgtgacattgttacgggggactgtctgcattgcctcggaaat
accgcaggaagacactgtgaggtctgtcgaccaggttactatggagatgcagtgcatgcc
aacgactgtaaggagtgtggctgtgatgtcagtggtgccatttccaccatgtgtgatgtc
aaatcaggccagtgtctgtgcagagaaaatgtgacaggacgcacttgtgaacgctgccag
tcgagcttctttgggcttcaaagtgggtatggctgtcagccctgtggctgcatccaatca
gcatctatctctgagtcatgtgatgaagagggacaatgtcagtgcatagagggagtggct
ggagataagtgtgatcgttgtagaaggggttattatggttaccatggtgatggttgcaga
gcatgcaactgtgatcacactggtggcaactgcgaccctgagaatggaaaatgtgtctgc
ccaccccaaacggagggggacacctgcaacaggtgtaaaacaggttactggggtcacaat
ctcaccacaggctgcaagccatgcagctgcagtgcaacaggaagcttcacccaccagtgt
gatctgctcagtggacagtgtttgtgcaaagatggcttctctggcaggtcatgtgaccag
tgtgcatctggttaccatagttacccatcatgctcagcatgtggctgtgacattgcagga
acaaatgagaagttctgcaacacaacgctcaacatatgtgaatgtcggcacactggacag
tgtgtgtgcaagcttggagtgtcaggccagcactgtgaggagtgtgtgtttggttggttt
gggttatcagctgagaatccagatggatgttctccatgtttctgttctggattgagccaa
aactgtgaggagcaaggaggactcaccagagtccctattattgttggtcaatcgcctgct
ttcccatcattggtcagtctgtctaacccatggggtgttggatctggagtttaccagcag
agagacgaaatgctgcttgatgctcgccagcttaatgccagtgggctctccggcccactc
tattggagactaccagctctttttgaaggggtccagttgttgtcatatggcgggctgctt
tcgtacatcatcaccttctatgctgaagatggttcaggactgtccaatcaggagcctcag
gtgctcatgaggggcgggaccctggagaagcacattatatacacagatatggttgcccct
aggaataggatcaggacccaacataacatcaggctgacagagcacaaatggaggtatttc
aattcagtgtcccagaaagcagtgagtcacaatgacttcatgtccgtcctcagtaatatt
caatacatcatcattaaggcttcgtacgggaccgagcttctgcagagcaggatctctaac
atcaccatggaaacggctgtaaaggcagagtcaggtgactcaacagaaaaggccagactg
atagagtcatgtttatgtccacctggatacactggactgtcttgtcaggactgtgcagca
ggatatttccgacagcctcagtctgaactttcacttcagagtcagaagttgatgcttgtt
cgtccgtgcattcagtgtcgttgcaacaaccaaagtgagatttgtgacccagagactggg
gactgtcagaattgccagcatcacaccagtgggcagcactgtgagctctgtgccccaggg
tattatatgaacatcagtggctgctctttgtgtgcctgccccctacaggacaacagtttc
agtcccacctgtgcgacagaaggagttgtgggggatttccggtgcacttcctgtcagaca
ggatatgaaggcagacactgtgagagatgcgccgttggttactatggtaacccctcgttt
ccaggcggggggtgtttgcaatgtggctgcagtgggtggggctccctccatccaaaatgt
gatgaactcacagggtactgtgagtgtaaggctggagtcagaggtcaattatgtgaccgg
tgtgatgagcgccatgtcctgcagtggagagagtgtgtgtcgtgtaatgacagctgcact
ggcgttctgctggaagacctagacaaattgcagaacaactacttctctgtcaataagagc
aacttcatcatggcaccatattggcagctggtgttgctggaaaaccaaaccagaaactta
gaggctgagatttatctgaacagatctttaacatcacatttgtctcgagtggatgatgac
ttaaatcatgtaacttctgacctcggcagtctgctgcatcaggtcggacgtcaatctgag
aacctggtggaacttgacatctctactaacaacagcttgtcccatggtgcactgctgctt
gagaacattagcagtcttcaagatagtattcaggagctgcagaaagtggcaagacttgtg
aatcggaccactcaggagaagttaacgtcagccaatcaaatgcatctgttggaggagttg
gagtccatgctgcaaaccatcagaagtgtaaacctgacagctgccaagtcagcagccaat
caggagctgggtttttcagagtctctcatagatacactacagggggatataccgtctaga
cacagtgagaatgagaacaggctctgcttcctcatcacctccctcaatgttaccacgaca
actttgcaacatgcagctattgagctacgtaaagctgcacaactaaacacagaaatggat
cacctgctggatgttgtagagactcagctgcaccaatatcagtcttttcatcagaacctc
agtttggaatttttgtccatggatgaactaatggtggacagtcagctgcttctggaggac
accatgagtctgacagaagagtttaccaacagcagcacagtggagctgctagcatcccag
ctggaccagtggcctcttttactcaggaggcacgtggatgctctagttgttgggttgata
atgacagatgctctgaaaaatgtttatcgtgcagaaaatcacacccaggaacttcaacgc
gacgcccactccctgcacagctacatgatggtggtgtgtaacatgtcccacaacaccagc
caattggctcagcttgatgatgacatcacagaacacgttaactccgcccataaggtgacc
ttggtggccctcacgtctgcctccctcgctgtcaacatgactggccagtcaaaacaggta
ctttcagaggagagcagggccaagatgaacatctcctctgctgttttagacgaaagtcag
aagatcaactatatggctgaagacttgcagctgaatgttaccatagtaaccaccagacta
cagctggtcagagattgcgtatttaacttcagcctcctcctcaatcaaccaaccaaagag
ctgcaaacccttcctaatggttccttcacatcacttcaacaggctctggatcagactgca
acagctcgctccagaataaaggtgttgttgcttccgctacagagactgaaagagcagctg
caggtttcttcttttgttgtggaaaacaccaataacacagtgagggagacaaatcgccta
atggctcacacacaaattgcagtcaatgaggcgcagcaaaaactggaagatgctgagcat
cgtactcagagtatgatggagaaaataaagccgctgaacatgctggaagatacgctgaag
aaaaacctgtcaaacatcagagaactgattgatcaggcccgaaaacaggcagcattgata
aaggtggcggtccaggcagacagagactgcattcgatcatacagacctcagattcagtcc
agaaacttcaacactctgagtttgatcctaaagacctccagtccagataacttgctcttc
tacctgggcagcaacaccacggtggacttcctggctgtagagatgcatgatgggaaggct
ttcctgctgtggaatgtgggttctggcaccacacgactggagtttcctggaacacatatc
tccaacaacagatggaccagaatcaacgccacacggattggagcccatggtgctctgtcc
gtccatcagctggactctgaattggctccaagaccggcagtaacaaagacatcaccagga
acatcgaaagttttagatatcaacagaaatactgtgatctacgttggtggattgggagct
cacactcagattcctgcagggctgcagtcctcaaccttccagggctgcctgggtgaagct
gtgttggacgagacaaacatcggactgtggaactacaacagccaggaggggaaatgtgga
ggttgcttcagcagtccccaagcagaagagacatccttccactttgacggttctggtttt
tctgtggtctacaaatctctgagagcaacatccacctccattgtgctgctgtttaaaact
ctgtctccaggtggattgctgctgtacctggcctccaacaacatgagcgactttctgtct
ttggagctcgtagaagggcatgtccgtctgaactttgacctgggatcaggtgctttgatc
cagacctcaaacaggaagtataacacaggagtttggtacaaaatcacactgcagaggaac
aaacaaaaaggctacctgtctatcatggcagcagaccaatcatcagataaggaggtgatg
gaggcagagtctccaggaacagcttcttcccttaatcgctctgatcttgacccgatctac
attggaggtcttcctttttccacaccaatcagtcaacaggtggtgtccaggttttatgtt
ggctgtataaaggacgtagagattgcccgttccaactttgacctgctgagagatgcatac
ggagtccaaaaaggttgcgttctcatggcggtgagaagtgtctccatgttgcctggaggc
tttgttcagatcactcccccatcattcagtcaggaggtggagcttttccttacatttttc
tcaaacaaccaatcaggactccttctggctgtctttggtgaaaaccaagcacacagacag
tacttcctgtcagttcacctgatctcaggtgctatagaagtggagtttggggatgtagat
ggagccacttggatggttacagtgatgaaatctgatggaggatctttcagtgagggaaga
aaacactccgtcattgtttctatcaacaggaaatctttgtccttacaggttgatgaggaa
cacctaaagtctgtccctctaatgtcaggaggactttctcagttgtccccattctctttg
ttcattggtggggtcccacctgaggagaagatccatctgcctaccagattgcgtgctcta
agcaggtcatttacaggttgcatccaacatctggtgatggacaaaatgcttgtcgatcta
tcagcagctgtcaggtatgaaggtgcagagcttaacagttgcttattggaggatagagct
aggggggcaatgcttcctgaaaaccaggatatagacccaacatctgactctgcatatctg
ccttcagctcaacctacacacctaagtgtcctcacacctcaaactttaatgtgtgtgtca
gaggaaaaccccacttttctgccatcagcagctcagtttggttcatccaggcacagtcac
atgactttcatcatcaaccccagtacagttcgaaaacgtgtgtcggtgaggctggtactt
cgaagccgtgctctggaaggagtgatcatccttctctctggctcaaaactgacagacttt
gtggccctcaatctcaaagaggggagggtcaggttttcagctgacctggggaaaggccct
gcctccatcacatcctctgttgttattaatgatggcgagtggcacactgtcagcgcagag
gtgagtcggcgattggtgtgggtttctgttgatggttcccgtcgagagtccatctcaatc
aaagggaatcagctggatgtggacaagagattgtacctgggagggttacctcgtggagtg
tccagcaggagaattaatgtcagcagcagctttccaggctgtgttcaatccatcagtctg
aatggtgccatgttggacctgtcaaaggcaaattctaagcttggtgtttcttcctgcttt
accaaggacagggcaggaagttactttaatggcagtggatacgctgaactgatgcatgat
gggtataaagttggct
DBGET
integrated database retrieval system
