Kryptolebias marmoratus (mangrove rivulus): 108251522
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Entry
108251522 CDS
T05608
Symbol
gdf5
Name
(RefSeq) growth/differentiation factor 5
KO
K04664
growth differentiation factor 5
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr04060
Cytokine-cytokine receptor interaction
kmr04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
108251522 (gdf5)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
108251522 (gdf5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
kmr04052
]
108251522 (gdf5)
Cytokines and neuropeptides [BR:
kmr04052
]
Cytokines
Transforming growth factors (RSTK binding)
108251522 (gdf5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TGF_beta
TGFb_propeptide
Motif
Other DBs
NCBI-GeneID:
108251522
NCBI-ProteinID:
XP_017297354
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All DBs
Position
LG4:835821..842684
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AA seq
347 aa
AA seq
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MSDLWFSVTSQKPRLSVQKEPFPGFYTATLQGSTVWVPPAPAQRDERGPLLRRQRYHFNI
SSLERDGLLGAELRILRKRLSDTRSAAEGPNPCLKLYTCSSGKQKPVLLQTRTVEDLLSG
FGNKWEVFDIHKVFRGLKSRQLCLELEALEHRGGRLLDLRTLGFARFGRANKEKAFLLAF
GKSKKGDLFYNEIKARSGHDNKTVYEYLFTQRRMRRAPVARGSKKLPRLPMQTLPHPQVA
KARPRCHRRRLHVNFKEMGWDDWIIAPLEYDAYHCDGACDFPIRSHLEPTNHAIIQTLIN
SMDPESTPPTCCVPTRLSPISILYIDSANNVVYKQYEEMVVESCGCR
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacctgtggttcagcgtcacgtcacagaagccgagactttcagtgcagaaggag
ccgtttcctgggttctacactgccacacttcagggttccaccgtttgggttcctccggcg
ccagcgcagcgagatgagcgaggacccctgctgcgacgccagcggtatcacttcaacatc
agctctctggaacgagacgggctcctgggggccgagcttcggatcctgaggaagcgtctg
tctgacacccgctcagctgctgaaggtccaaacccgtgtctgaagctctatacctgctcc
tcaggcaaacagaaacctgtcctgctccaaaccaggaccgtggaggacctcctcagcggc
ttcggcaacaaatgggaagtgtttgacattcataaggtcttcaggggtttgaaaagccgg
cagctgtgcttggagctggaggccctggagcacagaggagggcgcctcctggacctgagg
actctcgggttcgctcgattcggccgcgccaacaaagagaaagctttcctcctggcgttc
ggcaaaagcaagaagggcgacctgttctacaacgagatcaaagcccgatcaggtcacgac
aacaagaccgtctacgagtacctgttcacccagcgccgaatgagacgcgctcccgtagcc
agagggtccaagaaactgccgcgcctgcccatgcagaccctcccccacccacaggtggcg
aaggcgaggccacgctgccaccggagacgactccacgtcaacttcaaggagatgggctgg
gacgactggatcattgcgccgctggagtacgacgcctaccactgcgacggagcctgtgac
ttccccatccgttcacacctggagcccaccaaccacgccatcatccagacactcatcaac
tccatggacccggagtcgacgccgcccacgtgctgcgtcccgacccgcctcagccccatc
agcatcctctacatcgactcagccaataacgtcgtctacaagcagtacgaggagatggtg
gtggagtcatgtgggtgcaggtag
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