Kryptolebias marmoratus (mangrove rivulus): 108251529
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Entry
108251529 CDS
T05608
Name
(RefSeq) integrin alpha-3 isoform X2
KO
K06482
integrin alpha 3
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr04510
Focal adhesion
kmr04512
ECM-receptor interaction
kmr04810
Regulation of actin cytoskeleton
kmr04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
108251529
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
108251529
09142 Cell motility
04820 Cytoskeleton in muscle cells
108251529
04810 Regulation of actin cytoskeleton
108251529
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
kmr04147
]
108251529
04515 Cell adhesion molecules [BR:
kmr04515
]
108251529
04090 CD molecules [BR:
kmr04090
]
108251529
Exosome [BR:
kmr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
108251529
Cell adhesion molecules [BR:
kmr04515
]
Integrins
Integrin alpha subunits
108251529
CD molecules [BR:
kmr04090
]
Proteins
108251529
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
FG-GAP
Integrin_A_Ig_1
FG-GAP_3
Motif
Other DBs
NCBI-GeneID:
108251529
NCBI-ProteinID:
XP_017297365
LinkDB
All DBs
Position
LG12:975810..992534
Genome browser
AA seq
1036 aa
AA seq
DB search
MATGVCAVLSVCASVCVAFNVDTSFAVLKTGEAGSLFGFSVALHEDLKTRGHLLFIGAPR
ARAEPHIPANRTGGVYRCPVTSDQSDCTRMNFVYPEMNLAEDLVEDMWLGVSVFSQGQPG
GKVLACGHRFIKLSGVFRYQRMIGQCYLRVNDLLDDGDMNWQKTEQICHHKDGEAVEGMC
NMGISAFMSDTEIIVGSPGSYEWQGNVHVLKKNPYIESYSMESQFTSLQRRNIYIGYSVT
QARRLLSAVDDTIVTGAPRDSKDDARGSVLLVVKQSRNLVTEQTLRGRQVGSYFGNAVVA
LDLNSDGWNDLLVSAPFYFSHQPEAGGAVYVFMNAGGKIDSEPSVVLMGPAGSAFGMALI
SAGDLNQDGFQDFAVGAPFHDTGSVMIWTGSNKGVSTEPSQVIRGSSVSPGFKTFGYSLA
AGLDVDGNKYPDLLVGSLDDSVALLRSRPVVHLNKTLRVSPGVVDPNSCDFCIQVKVCFS
YKFNAGEKSKNDNITVLFTVTADVTSLKPRLLFQNNGNTVYSSFLSMPKKKCETLTVGLL
RSVQNKVEPLVFSLNASLYEKLPEKGNHVQDLRHLPVLNQTPRPVRTQIHIQKACGSDNH
CHSNLQMSARFVDENQKPFRRLNGDPVLDYNTSIRWLLLEVNVTNTPSADRLAEDAHNAV
LNISIPPELTFSRVAPKADGSTVECSVRDIFLLCQLGNPFRSNQKDRVLIKFQPSENILD
TKELRSQLQLSTLSEQSDLSPVSASLLVEYSLQASLVLIGPPDPIFFSGHVIGEEAMKKT
EDIGSLVVFTLQVYADRKSLGRLGNLEVEFDWPKEVSNGKWLLYLTEIQFDHTSNPHCTQ
TQINPLNLLTLNEDEKRMRRALKEEKKKQEGRPLPVFSRQEQKKSYKLSCSDGARCVKIS
CPLLNTNSSVTLMVRSRLWNSTMIEDYSDARSVLVRVQASLKLKTNKSSIKMKSPPSEIE
VFIYPDSALQVHSGAPLWIIVVSVLAGVLLLALICLLLWKCGFFKRASTRETYEAKSQRA
QKKSQPSESDKLTEEL
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atggcgacaggtgtgtgtgcggtgctgagtgtgtgtgccagcgtgtgtgtggcgtttaac
gtggacacgtcgttcgcggtgctgaagacgggcgaggctggcagtctgtttggattctct
gtggctctgcacgaggacctgaagacgagaggtcacctccttttcatcggcgctcccagg
gcgagggcagagcctcacattccggccaatcgaaccggaggagtgtaccgctgcccagtc
acgtctgaccaatcagactgcacgagaatgaacttcgtatatccagaaatgaacctcgct
gaggacctggttgaggacatgtggctgggcgtctccgtgttcagtcagggccaacccggt
ggaaaggtgttggcttgtggtcatcggttcattaaactgtccggagtgttcagataccag
cgtatgattggtcagtgttatctccgagtaaacgacctgctcgacgacggcgacatgaac
tggcagaaaacagagcagatatgccatcacaaggacggcgaagctgttgaaggcatgtgt
aacatggggatctccgccttcatgagcgacactgaaatcatcgttggctcgcctgggagc
tacgaatggcaaggaaatgttcacgtcctcaagaagaacccatacatcgagtcatactcg
atggagagccagttcacctcgctgcagcgtaggaacatctatataggatactcagtgacc
caggctcgtcgccttctgtctgcggttgatgacaccatcgttacaggagctccccgggac
agtaaagacgacgctcgaggctcggtgctgctggtggtcaaacagtccaggaatctggtg
actgaacagacgctgcgaggtcggcaggtgggctcgtactttggtaacgcggtggttgcc
ctcgacctcaacagtgacggctggaacgacctgctcgtgagcgctcctttttacttcagt
catcagccggaggcaggcggggcagtttacgtctttatgaatgccggggggaagatcgac
tctgaacccagcgtggttctgatgggccctgctggatcagcttttggaatggctctgatt
tccgccggagacctcaaccaggacgggtttcaggactttgcagtgggagctcctttccat
gatacgggaagcgtgatgatctggaccgggagcaacaagggggtctctacagaaccgagc
caggtgatccggggcagcagcgtgtctcctggattcaagacgtttgggtactctctggca
gcaggtctggatgttgatgggaacaaatatccagacctgctggtcggttctctggatgac
tctgttgctctcctcagatcccgtccagttgttcacctgaataagacgctgagggtttct
ccgggtgtcgtcgaccccaacagctgtgacttctgcatccaggtgaaggtgtgtttctcc
tacaagttcaacgctggagagaagagcaaaaacgacaacatcactgtcctcttcacagtg
accgctgatgtcaccagcctcaagccccgcctccttttccagaacaacggaaacacagtg
tactccagtttcctgtcgatgcccaaaaaaaagtgtgaaactctgacagttggactgctg
agatcagtccaaaacaaagtggaacctctggtattctccctgaacgcctcgctgtacgag
aagctgcctgagaaaggaaaccatgtccaagatctgagacacctccctgttctcaaccag
acaccccgacccgtcagaacccagatccacatccagaaagcctgcggttctgataaccat
tgccatagtaacctccagatgtcggcccggttcgtggatgagaaccagaagccgttcagg
aggctgaacggcgacccggtgttggactacaacaccagcatcagatggttgcttctggag
gttaacgtcaccaacacgccgtcagcggaccgactcgctgaggatgctcacaacgctgtc
ttaaacatcagcatcccgccggagctcaccttctccagagtcgcaccaaaggctgacggc
tcaacagttgagtgttctgttagggacatttttcttctgtgccagctggggaaccctttc
aggagcaaccagaaggaccgggttttgatcaagtttcagccgtctgagaacattctggac
accaaggagctccggtctcagctgcagctgtccacgctcagtgagcagtccgatctgtct
ccggtttctgcctccctgttggtggaatattccctgcaggcgtctctcgttctaatcggt
ccgcctgaccccatcttcttcagtggtcatgtgatcggggaggaagccatgaagaagacg
gaggacatcggcagtctggtggtcttcaccctccaggtgtacgctgaccggaagtcactt
ggtcgcctcggcaacctggaagtggaatttgattggccgaaggaggtgtccaatgggaag
tggctgctgtatctcacggagatccagttcgaccacacctccaaccctcactgcactcaa
acccagatcaatccccttaacctcctgactttaaatgaggatgagaagaggatgaggagg
gccctgaaggaagagaagaagaagcaggaaggaagaccacttcctgttttcagcaggcag
gagcagaagaagtcctacaaactgagctgcagcgacggggccaggtgtgtgaagatctcc
tgtcctctgctgaacaccaacagctcggtaacgctgatggtcaggagccggctgtggaac
tccaccatgatcgaggactacagtgacgccaggagtgtgctggttcgagtccaggcctcc
ttaaagctgaagaccaacaagtccagcatcaaaatgaagtcccccccctcagagatcgag
gtcttcatttacccagactctgcgctccaggtacattctggtgctcccctgtggatcatc
gtggtgtcagtcctggccggagttctgcttctggctctgatctgcctgctgctatggaag
tgtggctttttcaagcgagccagcaccagggagacgtacgaagccaagagccaaagagcc
cagaagaagagccagccgtctgagagcgacaagctgactgaggagctctga
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