Kryptolebias marmoratus (mangrove rivulus): 108251586
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Entry
108251586 CDS
T05608
Symbol
lamp1a
Name
(RefSeq) lysosome-associated membrane glycoprotein 1a
KO
K06528
lysosomal-associated membrane protein 1/2
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr03272
Virion - Hepatitis viruses
kmr03273
Virion - Lassa virus and SFTS virus
kmr04140
Autophagy - animal
kmr04142
Lysosome
kmr04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
108251586 (lamp1a)
03272 Virion - Hepatitis viruses
108251586 (lamp1a)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
108251586 (lamp1a)
04142 Lysosome
108251586 (lamp1a)
04140 Autophagy - animal
108251586 (lamp1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
kmr04131
]
108251586 (lamp1a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
kmr04147
]
108251586 (lamp1a)
04090 CD molecules [BR:
kmr04090
]
108251586 (lamp1a)
Membrane trafficking [BR:
kmr04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
108251586 (lamp1a)
Autophagy
Chaperone mediated autophagy (CMA)
Cargo receptors
108251586 (lamp1a)
Other autophagy associated proteins
RNautophagy/DNautophagy
108251586 (lamp1a)
Exosome [BR:
kmr04147
]
Exosomal proteins
Exosomal proteins of hepatic cells
108251586 (lamp1a)
CD molecules [BR:
kmr04090
]
Proteins
108251586 (lamp1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lamp2-like_luminal
Lamp2_2nd
VAS1_LD
DEC-1_N
Motif
Other DBs
NCBI-GeneID:
108251586
NCBI-ProteinID:
XP_017297427
UniProt:
A0A3Q3BHK5
LinkDB
All DBs
Position
LG15:3802415..3809263
Genome browser
AA seq
416 aa
AA seq
DB search
MKVCRNLTAVFTVCWAVLGCLQAVTLEVNEGNSTCIKAELSASLSITYVSSNSSRTVSVP
LPDSASVDAANSSCGADGSPAQLVAAFGAGHALGLSFSTNGSVYSVRNLTLRYNLSDASL
FPEASSSGVVTVTNDSVEIWAPINTTYRCMSPTTIVASGDSVTFSRMKLEAYMPGNDLSP
AESVCTADQSTTPATPTTAGTTTTAAPAPTPPGAPERGTYSVKDSNGTECLLAQMGLQLN
VSYVSQSQNKTVQELFNLTPNLTSWSGSCGASRATLVLTQEPTLTLSFTFTMNTTTNKYR
LSGMGLQANWTDMAAPFSASNASLDFLRSTLGHSYMCNAEQTLQVAPAFSLNTFRLQVQP
FGVKTKQFAAAEECQVDQDQMLIPIVVGAALAGLVLIVLIAYLIGRKRSHAGYQTI
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtctgccggaacctaaccgcagttttcaccgtctgctgggcggttttaggttgt
ctccaggcggtgactcttgaagtgaatgagggaaactccacctgcatcaaagctgagctg
tcggcgtctctctccatcacctacgtctcctccaacagctcgaggacggtttctgtccct
ctgcccgactccgcctcggtggacgcagctaacagctcgtgcggcgccgacggcagcccg
gcgcagctggtggcggcgtttggagcgggccacgccctcggcctgagcttctccaccaat
ggaagcgtctacagcgtaaggaacctgaccctgcggtacaacctgagcgatgcgtcgctc
ttccccgaggccagcagctccggtgtggtcaccgtgacgaatgactccgtggagatctgg
gcgccaatcaacaccacctaccgctgcatgagtcccaccaccatcgtagccagcggcgac
tccgtcactttctcccgcatgaagctggaggcgtacatgcccgggaacgacctgagtcca
gcagagagcgtgtgtacggccgatcaaagcaccacgccggccactccgaccaccgccgga
actacaacgacggcagcccccgcgcccacaccgccaggagcacccgaacgcggcacctac
tccgtgaaggacagcaacggcaccgaatgcctcctggcccagatggggctgcagctgaac
gtctcctacgtctctcagtctcagaataagacggtccaagaattattcaacctgactccc
aacctgacgagctggtcggggtcgtgcggcgccagcagagccacgctggtgttgacccag
gagccaacgttgacgctcagcttcaccttcactatgaacacgacgaccaacaagtaccgc
ctgagtgggatgggcctgcaggccaactggaccgacatggccgctccgttctcagccagt
aacgccagtttggacttcctgcggagcacgctgggccactcttacatgtgcaacgctgag
caaaccctgcaggtggcgccggccttctctctcaacacgttcagactgcaggtccagccg
ttcggcgtcaagacgaagcagtttgctgcagcggaggagtgtcaggtggaccaggaccag
atgttgatacccatcgttgtcggagcggctctcgccggcctggtgctgatcgtcctcatc
gcgtatctgatcggccggaagaggagccacgccgggtaccagaccatctga
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