KEGG   Kryptolebias marmoratus (mangrove rivulus): 108251590
Entry
108251590         CDS       T05608                                 
Symbol
hltf
Name
(RefSeq) helicase-like transcription factor isoform X1
  KO
K15711  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
Organism
kmr  Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:kmr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:kmr04121]
    108251590 (hltf)
   03400 DNA repair and recombination proteins [BR:kmr03400]
    108251590 (hltf)
Enzymes [BR:kmr01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     108251590 (hltf)
Ubiquitin system [BR:kmr04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    108251590 (hltf)
DNA repair and recombination proteins [BR:kmr03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    108251590 (hltf)
SSDB
Motif
Pfam: SNF2-rel_dom HIRAN Helicase_C zf-C3HC4_3 zf-C3HC4_2 zf-C3HC4 ResIII DEAD zf-RING_2 zf-RING_UBOX zf-RING_5 RING_XB3-XBAT31 zf-ANAPC11 zf-C3HC4_4 DUF5817 zf-rbx1 Prok-RING_4 HDA2-3 zf-Nse zf-RING_4
Other DBs
NCBI-GeneID: 108251590
NCBI-ProteinID: XP_017297430
LinkDB
Position
LG10:1002500..1020502
AA seq 958 aa
MSSCWWRFGWDTTDRFETSTESLSQAIRAATSEEPDADGSVQFGILRGTVVGLRYYTGMV
NRGEMVGLVREPQNPYDRNAVKVTNVYGNQVGHIKKELAVAMAYVMDNNLAKVEGVVHSG
TNNTFSMPVMLSFLGKEENKDAVMRYMASRGYKLNMDGSGSTDACSGRYQNAFSAKKGVT
IPLTAEELKNAFDNLFEGLMESKDGEKESAEAVATPLLPHQKQALSWMCARENKDTLPPF
WEKRGELYYNSLTFFSTKEIPERVRGGILADDMGLGKTLTTIALILTNFHKGKSLPVEKC
KEWFSPTKGETKPVEYSKQEESSSAEYKSGLSNPGGPHCSNLHKKEAIDTDAADIVVVED
EPQKHLLKKKRKLTKQKASKDGTVLFEDFDFAAALSSSTTDTSPKKKKTPENASESQNVK
SSITENTEDLSVRATLIICPLSVLSNWLDQFEQHVHSNVKLNVYLYYGSERNRSKKFLSS
QDVVITTYNVLSADLGNKSPLHGIKWLRVVLDEGHIIRNPNTQMSKAVLELKAQRRWILS
GTPIQNSMKDLWMLLAFLRLKPFNVREWWNRVIQRPVMQGDRDGLQNLQNLVRCITLRRT
KSSEINGLRLVSLPEKTVSVEQVDLSQQEREEYELARNEGRRTIGRYVAEGSVLRNYADV
LVILMRLRQHCCHPDLLPNISSDLGTVTTPAELRERLIDKLRFVLASGSDEECSVCLDSI
HLPVITHCAHVYCRPCIAQVISTEPEKARCPLCRSEIKTSELVEFPAEEMEDDKTTSSDR
WRTSSKVEALMGNLLRLRSEDSNIKSLVVSQFTRFLTILETPLREHGFSFVRLDGSMNQK
KRTQIIQDFQSSAAGGPSIMLLSLKAGGVGLNLTAASHVFLMDPAWNPATEEQCIDRCHR
LGQKRKVVVTKFIVKNSVEENMVKIQRKKQDLVEKAFGSANTDRKTSRIDDIRVLLEL
NT seq 2877 nt   +upstreamnt  +downstreamnt
atgtcttcttgctggtggaggttcggctgggacaccactgatcgctttgagaccagtaca
gagtccctgtcccaggccatcagggctgctacgtctgaggagccggatgcagatggcagt
gtgcagtttggtatcctgcggggaactgtggtcgggcttagatattacactgggatggtg
aaccgcggggagatggtgggtttagtgcgggagcctcaaaatccatatgaccgtaacgca
gtgaaagttacaaacgtatatgggaaccaggttgggcacatcaagaaggagctggctgta
gctatggcctatgtgatggacaacaacttggctaaagtggagggggtggtacactcgggg
acaaacaacaccttctccatgcctgtgatgttgtcattcttggggaaagaagagaacaaa
gatgctgtgatgaggtacatggcaagtcgaggatataaactgaacatggacggaagcggg
tcaacggacgcatgctcaggtagataccagaatgctttttcagccaagaaaggtgtgact
atcccactaactgcagaggagttaaagaatgcatttgataacttgtttgaaggtttgatg
gagagtaaagatggggagaaggaatcagctgaggctgtggccactcccctccttcctcac
cagaaacaagctctgtcctggatgtgtgctcgagaaaacaaagacacgttgcctccattc
tgggagaagagaggtgagctgtactacaacagcctcacgtttttttctactaaagaaata
ccggagagggtccggggaggaatcctggcagatgacatgggattgggtaaaactctgaca
acaatcgctctgatcctcaccaactttcacaaaggaaagtcgctgcctgtggagaaatgt
aaggagtggttctcaccaaccaaaggtgaaactaaacctgtggaatactccaagcaggaa
gaaagcagcagtgcagaatataaatcaggattgagtaatcctggtggtcctcattgctca
aaccttcacaagaaggaggcgatcgatactgatgcagcagatatagtggtggtagaagat
gagccacaaaaacatctgttaaaaaagaagaggaaactgaccaagcagaaagccagtaaa
gatggtacagttttgtttgaggattttgactttgctgcagcactgagcagctcaacaaca
gatacaagtccaaagaagaagaaaactccagaaaatgccagtgaaagtcaaaatgttaaa
tcgtccatcactgaaaacacagaggacttatcagtgagagcaactctcattatatgtcct
ctctctgtgctcagcaactggctggaccaatttgagcagcatgtccattctaatgtaaag
ctaaacgtctatctgtattacggttcggagcgtaacaggagcaagaagttcctgtcctct
caggatgtggtaatcaccacatacaacgtcctctctgctgacttagggaataagagtccc
ctacatggtatcaaatggctgagggtggtactggatgaaggacacatcataagaaatcca
aacacacaaatgagcaaagctgtgctggaactgaaagctcagaggcgctggattctttca
ggtactcctatccagaacagcatgaaggacctgtggatgctgctggccttcctgcgtctg
aaacccttcaatgttcgggagtggtggaacagagtgatccagagacctgttatgcaagga
gacagagatggtctgcaaaacctccagaacctggtaaggtgcatcaccctgagacggacc
aagagcagtgagataaacggcctccgcctggtgtcactgcctgagaaaacggtgtctgtg
gagcaggtggatctcagccagcaggagagggaggagtacgagctggcacgtaatgagggc
agacgtactatcggcagatatgtagctgaagggtctgtcttgaggaattatgctgatgtt
cttgtcattctgatgaggctccgacagcactgctgccaccctgacctgctcccaaacata
tcctcagatttggggacggtgacaacaccagcagagctgcgggagcgtctgatagataaa
ctacggttcgtgttggccagtggctctgatgaggagtgctccgtttgcctggactcgatc
catctgcccgtcatcacgcactgtgcccacgtttactgccgaccctgcatcgcccaagtc
atcagcaccgagccggagaaggcacggtgccccctctgtcgaagtgagatcaagaccagt
gagctggtggagtttccagcggaggagatggaagatgacaaaactacaagctctgacagg
tggaggacaagctcaaaggtggaggcgctgatgggaaaccttctcaggctgcgatctgaa
gacagcaacattaaatctttggtcgtctctcagtttacacgcttcctcaccatcctggaa
acacctcttagagagcatggtttcagttttgtgcgtctcgacggctccatgaaccaaaag
aagaggactcagatcattcaggactttcagagctctgcagcaggtggcccttcaattatg
ctcctgtcactcaaagctggaggggtgggtcttaacttgactgctgcctctcatgttttc
ctgatggaccctgcatggaacccagctactgaggagcagtgtattgatcggtgccaccgt
ttgggccagaagaggaaagttgtggtcaccaagttcattgtgaagaattcagtggaggag
aacatggtgaagatccaaaggaagaagcaggacctggtggagaaggcatttggctcagct
aacacagacaggaaaacatctcgcattgatgacatccgagttctgttggagctgtag

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