Kryptolebias marmoratus (mangrove rivulus): 108251648
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Entry
108251648 CDS
T05608
Symbol
copb1
Name
(RefSeq) coatomer subunit beta isoform X2
KO
K17301
coatomer subunit beta
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
kmr04131
]
108251648 (copb1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
kmr04147
]
108251648 (copb1)
Membrane trafficking [BR:
kmr04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
108251648 (copb1)
Exosome [BR:
kmr04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
108251648 (copb1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Coatamer_beta_C
Coatomer_b_Cpla
HEAT_2
HEAT
Cnd1
HEAT_EZ
Arm
MMS19_N
AP4E_app_platf
Motif
Other DBs
NCBI-GeneID:
108251648
NCBI-ProteinID:
XP_017297507
UniProt:
A0A3Q3EUZ6
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Position
LG15:6771549..6781373
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AA seq
953 aa
AA seq
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MTAAENVCYTLINVTSDSEPPSEVSLKTDLEKGEIKAKTEALKKVIIMILNGEKLPGLLM
TIIRFVLPLQDHTIKKLLLVFWEIVPKTTPDGKLLQEMILVCDAYRKDLQHPNEFIRGST
LRFLCKLKESELLEPLMPAIRACLEHRHSYVRRNAVLAIYTIYRNFEHLIPDAPELIHDF
LVNEKDASCKRNAFMMLIHADQDRALDYLSTCIDQVHTFGDILQLVIVELIYKVCHANPS
ERARFIRCIYNLLQSSSPAVKYEAAGTLVTLSSAPTAIKAAAQCYIDLIIKESDNNVKLI
VLDRLIELKEHPTHERVLQDLVMDILRVLSTPDLEVRKKTLQLSLDLVSSRNVEELVIVL
KKEVIKTNNVTEHEDTDKYRQLLVRTLHSCSVRFPDMAANVIPVLMEFLSDTNEAAAADV
LEFVREAIQRFDNLRPLIIEKMLEVFHAIKTVKIYRGALWILGEYCSTKEDIQSVMTEVR
RSLGEIPIVDNEIKKETGELKAEDEVSAAPAQKLVTEMGTYVTQSALSSSRPSKKEEDRP
PLRGFLMDGDFYVAASLATTLTKVALRYVSIVQDKKKQNSFVAEAMLIMVTVLHLGKSSL
PKKPITDDDVDRISLCLKVLSECSPLMNDIFNKECRKSLSHMLTVRLEEEKLSQKKESEK
RNVTVQADDPISFMQLTAKNEMTSKEDQFQLSLLAAMGNTQRKEAADPLASKLNKVTQLT
GFSDPVYAEAYVHVNQYDIVLDVLVVNQTSDTLQNCTLELATLGDLKLVEKPSPLTLAPH
DFANIKANVKVASTENGIIFGNIVYDVSGAASDRNCVVLSDIHIDIMDYIQPASCTDAEF
RQMWAEFEWENKVTVNTNIVDLNEYLQHILKSTNMKCLTPEKALSGFCGFMAANLYARSI
FGEDALANVSIEKPIHLGPEAPVSGHIRIRAKSQGMALSLGDKINLSQKKANI
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgacagctgcagaaaatgtttgttacactctgatcaatgtaacatctgactcggagccc
ccttccgaagtcagcctaaaaacagatctagagaagggagaaatcaaagccaagactgaa
gccctgaagaaagtcataattatgatcctgaatggcgagaagttgccaggactgttgatg
actataattcgctttgtgctgccacttcaagaccacaccatcaagaagctgctgcttgtt
ttctgggaaattgttcccaaaacaactcccgatggcaagctgcttcaagagatgatcctg
gtctgcgatgcttacagaaaggaccttcagcatcccaatgagttcatccgtggctccact
ctgcgctttctgtgcaagctgaaggagtctgagctgcttgagccgctcatgccagctatc
cgagcctgcctggagcaccgtcacagctatgtgcgccgcaatgccgtcctggccatatat
accatctacaggaattttgagcatctcatccccgacgctccagagttgatccatgacttt
cttgtcaatgagaaggatgccagctgtaagagaaatgctttcatgatgctgattcacgct
gatcaggatcgagctctggattacctcagcacatgtattgaccaagttcacacttttggt
gacatcttgcagctggtcattgttgagctgatttacaaggtttgccatgctaacccttct
gaacgtgcccggtttatccgttgcatctacaacctgctgcagtcctcgagcccagctgtt
aaatacgaggctgctggtactcttgtgaccctctccagtgctcccacagccatcaaggct
gctgcacagtgctacattgatttgatcattaaggagagcgacaacaacgtgaagctgatt
gttcttgatcgtctgattgaactgaaggagcatccaactcacgagcgtgtgcttcaagac
cttgtgatggacatcctgcgtgtcctcagcactcctgacctggaagtcagaaagaagacc
ttgcagctgtctctggaccttgtctcatctcgtaacgtagaggagttggtgattgttttg
aagaaagaggtgatcaagacaaacaatgtaacggagcacgaagacactgataaatacagg
cagctcttggtgcgaactctccactcttgcagtgtgcgcttccccgacatggcagccaat
gtcatacctgtgctgatggaattcctgagtgacactaatgaggcagctgctgctgatgtg
ctggagtttgtgcgagaggccattcagaggttcgacaacttaagacccctgatcatcgag
aagatgctggaggtgtttcacgccatcaaaactgtcaagatttacagaggagcactttgg
attttaggagaatactgcagcaccaaagaagacatccagagtgtgatgacagaagtacgc
aggtccctgggagagatcccgatagtggataacgagataaagaaggagacgggcgagttg
aaagcagaagatgaagttagtgcagctccggctcagaagttagtcacagagatgggcacc
tatgtgacacagagtgctctgagctcctccaggccttcaaagaaagaagaagacaggcct
ccactaagaggctttttgatggatggagacttctacgttgcagcttcgttggccaccaca
ctaaccaaagtggctctgcgctacgtttcaattgttcaagacaaaaagaagcaaaattcg
ttcgtcgctgaagccatgctgataatggtcactgtgctgcacctgggcaagtcctctctg
cccaagaagccaattacagacgatgacgtggaccgcatttcgttatgcctgaaggtcctg
tcagagtgttcgccacttatgaatgacattttcaacaaggagtgccgcaaatccctgtca
cacatgctgactgtcaggctggaggaggagaagctgtctcagaagaaagaatcggagaaa
cgtaacgtgacggtgcaagcggacgacccgatctccttcatgcagctcacagccaaaaat
gagatgacctccaaggaggaccagtttcagctgagcctgctggctgctatgggcaacact
cagaggaaggaggctgctgaccctcttgcatcaaaactcaacaaggtgacccagctgaca
ggcttctcagacccagtgtacgctgaagcctacgttcatgtcaaccagtacgacattgtg
ctggatgtgctggtggtcaaccagacaagtgatactcttcaaaactgcacccttgagctg
gccaccttaggggatctcaaattagttgaaaagccttcacctctaactctggcccctcat
gactttgctaacatcaaggctaatgtcaaagtggcttctactgaaaatggcataatattt
ggcaacattgtctatgatgtgtctggagctgctagcgacaggaactgcgttgtcctcagc
gacatccacattgacatcatggactacatccagccagcctcctgcacagatgcagaattc
agacagatgtgggcagagtttgagtgggaaaacaaggtgacggtgaacaccaacatcgtt
gacctgaatgaatacctccagcacatccttaaatccactaacatgaagtgtttgactcct
gaaaaggcactctctggcttctgtggcttcatggctgccaacctttatgctcgttctatc
tttggagaagacgccctggctaatgtcagcatcgagaagcctatccacctggggcccgag
gcacctgtcagcggacacatacgcatcagagccaaaagtcagggaatggccctgagtctg
ggtgacaagatcaacctctcccagaagaaagcaaatatctga
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