Kryptolebias marmoratus (mangrove rivulus): 108251747
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Entry
108251747 CDS
T05608
Symbol
vps35
Name
(RefSeq) vacuolar protein sorting-associated protein 35
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108251747 (vps35)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
kmr04131
]
108251747 (vps35)
Membrane trafficking [BR:
kmr04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
108251747 (vps35)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
FerA
Motif
Other DBs
NCBI-GeneID:
108251747
NCBI-ProteinID:
XP_017297647
UniProt:
A0A3Q3FDU4
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Position
LG15:complement(359521..368085)
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AA seq
798 aa
AA seq
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MPTTQQSPQDEQEKLLDEAVQAVKVQSFQMKRCLDKNKLMDALKHASNMLGELRTSMLSP
KSYYELYMAISDELHYLEVYLTDEFAKGRKVADLYELVQYAGNIIPRLYLLITVGVVYVR
SFPQSRKDILKDLVEMCRGVQHPLRGLFLRNYLLQCTRNILPDDGEQPEGSEEMTGDIND
SIDFVLLNFAEMNKLWVRMQHQGHSRDREKREKERQELRILVGTNLVRLSQLEGVNVDKY
KQVVLAGVLEQVVNCRDSLAQEYLMECIIQVFPDEFHLQTLNPFLRSCAELHQHVNVKNI
IIALIDRLALFAHREDGPGIPAEIKLFDIFSQQVATVIQSRQDMPSEDVVSLQVSLINLA
MKCYPDRVDYVDKVLESTVEIFNKLNLEHIATSSAVSKELTRLLKIPVDTYNNLLMVLQL
KHFPPLFEYFDFESRKSMSCYVLSNTLDCNTIMVAQEQVDAILSLVSTLIQDQPDQPADD
PDPEDFAEEQSLVGRFIHLFHSEDPDQQYLILNTARKHFGAGGNQRIRFTLPPLVFAAYQ
LAFRYKENSSVDDKWEKKCQKIFSFAHHTISALIKAELSELPLRLFLQGALAAGEIGFEN
HETVAYEFMSQAFSLYEDEISDSKAQLAAITLIIGTFERMKCFSEENHEPLRTQCALAAS
KLLKKPDQCRAVSTCAHLFWSGRSTDKNGEEIRDGKRVMECLKKALKIANQCMDSSLQVQ
LFIEILNRYICFYERENDAVTVQVLNQLIQKIREDLPNLEASEETEQINKHFHNTLEHLR
LQRESPESEGPAYEGLVL
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atgccgaccacccagcagtctcctcaggatgagcaggagaagcttctggatgaagctgtt
caggctgttaaagtccagtccttccagatgaagagatgcctggacaagaacaagttgatg
gacgctttgaagcacgcctctaacatgctcggagagctgaggacctccatgctttctcca
aagagctactatgagctctacatggccatctctgatgagcttcattacctggaggtttac
ctgacggatgagttcgctaaaggaaggaaggtggcagacctttatgagctggtccagtac
gctgggaacatcatcccccgactctacctgctgatcaccgtgggggtggtgtacgttcgc
tccttccctcagtcccgtaaggacatcctgaaggatctggtggagatgtgccggggggtc
cagcacccgctcagaggtctgttcctcagaaactacctgctgcagtgcacccgtaacatc
ctgccagatgacggcgagcagcccgaggggtcggaggagatgaccggggacatcaacgac
tccattgactttgtccttctgaactttgctgaaatgaataaattgtgggtccgaatgcag
caccagggtcacagccgggaccgagagaagcgggagaaagaacggcaggaacttcggatt
ctggtgggaaccaatctggtccgcctgagtcagctggagggggtcaacgtggacaagtac
aagcaggtggttctagctggagtcctggagcaggtggtgaactgcagggactctctggct
caggagtacctcatggagtgcatcattcaggtttttccagatgagttccacctccaaact
ctgaacccgttcctgcgttcctgcgcggagcttcatcagcacgtcaacgtgaagaacatc
atcatcgctctgatcgacagacttgctctgtttgctcatcgagaagatggtccagggatt
ccagctgagatcaaactgtttgacatcttctcccagcaggtggccacggtcattcagtcc
cgtcaggacatgccgtcagaggacgtggtttctcttcaggtgtctctcattaacttggcc
atgaagtgttaccctgaccgggtggactatgtggacaaagtcctggagagcacagtggaa
atatttaataaactcaatctggagcacatagcaaccagcagcgccgtgtccaaagaactg
acccggctcctgaagatccctgtggacacctacaacaacctgctgatggtcctgcagctc
aaacacttccctccgctctttgaatactttgacttcgagtcccgtaagagcatgagctgc
tacgtgctgagcaacacgctggactgcaacaccatcatggtggctcaggagcaggtggat
gccatcttgagcttggtgtccacgctgatccaggaccagccagaccaaccagctgatgat
cccgacccggaggactttgctgaggagcaaagtcttgtgggtcgtttcatccacctgttc
cactctgaagaccctgatcagcagtatctgattctaaacacggcccggaaacattttgga
gcaggtggaaaccagaggatccgcttcactctgccgcctctggtgtttgctgcctaccag
ctggccttcagatacaaggagaactcctcagtggacgataagtgggagaagaagtgccag
aagatcttttctttcgctcaccacaccatcagtgctctcatcaaggcggagctttccgag
ctgccgctgcgcctcttcctgcagggggcgctggctgcgggggaaatcggctttgagaat
catgaaaccgtagcgtacgagttcatgtcccaggccttctctctgtacgaggatgagatc
agcgactccaaagcccagctggccgccatcaccttgatcattggcacctttgagcgaatg
aaatgtttcagcgaggagaaccacgagcctttaaggactcagtgtgctctggctgcttcc
aagctgttaaagaaacccgaccagtgcagagccgtcagcacgtgcgctcatctgttctgg
tccggccgcagcaccgacaagaacggcgaggagatccgggacgggaagcgggtcatggag
tgcctgaagaaagcgctgaagatcgccaaccagtgcatggactcatctctgcaggttcag
ctgttcatagagatcctgaacagatacatctgcttctacgagagggagaacgatgctgtg
accgtccaggtgttgaaccaactgatccagaagatcagagaggatcttccaaacctggaa
gcaagtgaagaaacggagcagatcaacaaacatttccacaacaccctggagcacctccgc
ctgcagagagagtcccccgagtctgagggacccgcctacgagggcctggtcctctga
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