Kluyveromyces marxianus: KLMA_10132
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Entry
KLMA_10132 CDS
T05269
Symbol
RAD50
Name
(RefSeq) DNA repair protein RAD50
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
kmx
Kluyveromyces marxianus
Pathway
kmx03440
Homologous recombination
kmx03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
kmx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
KLMA_10132 (RAD50)
03450 Non-homologous end-joining
KLMA_10132 (RAD50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kmx03032
]
KLMA_10132 (RAD50)
03400 DNA repair and recombination proteins [BR:
kmx03400
]
KLMA_10132 (RAD50)
DNA replication proteins [BR:
kmx03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
KLMA_10132 (RAD50)
DNA repair and recombination proteins [BR:
kmx03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
KLMA_10132 (RAD50)
BRCA1-C complex
KLMA_10132 (RAD50)
NHEJ (non-homologous end-joining)
MRX complex
KLMA_10132 (RAD50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
Rad50_zn_hook
AAA_15
SMC_N
SbcC_Walker_B
AAA_21
AAA_13
AAA_29
AAA_22
TPR_IF140_C
YwqH-like
ABC_tran
AAA_16
Phospholamban
Motif
Other DBs
NCBI-GeneID:
34713814
NCBI-ProteinID:
XP_022673669
UniProt:
W0T6N6
LinkDB
All DBs
Position
1:274084..277974
Genome browser
AA seq
1296 aa
AA seq
DB search
MSAIYKLSIQGIRSFDSNDRETIEFGKPLTLIVGTNGSGKTTIIECLKYATTGDLPPNSK
NGAFIHDPKITGEKDIRAQVKLAFVNAKGVNMIVTRNIQLLAKKNANTFKTLEGQLVAIN
RGERTTLSTRATELDQQIPLYLGVPKAILDYVIFCHQEDSLWPLSEPSILKKRFDEIFQA
MKFTKALDNLKTIKKDMAIDIKLLKQSVEHLKTDRDRSKATKMNVSQLENKVEEYLLEVK
DIEKKLEAITSQSDELFSSNQQFQEVISRSESLQRSKSSLSEQIQRLQSSIEIIPKSKSD
LQNMLSNFEGILKDIDSKLKGHFEERERIVSFLEKERTSQQRVIRLQGELCSKKEQYEHS
KMKKEELLTELSNTYNIPKQNVTSEVSTMLKMANERLNTIQYKNQKEEADIEEQLLTSRN
SLAKKEQQLSYISSDMKKLQNQISKLSNRSKDLNVNETELHVQKENLKSYEAKLRNWDSE
NVIESLMNEIKSKNQDILSLEDQLEAIQLRINKVNQHSDLFAKHSLLKGNLSAKLKDIKK
MEEEIMHEARNLNVSLRIDDDLPESFKLVYNDMKEELSKCKMECDTATKFSIQSENQMKN
LENQIQVLNSTTSNLELKIKAVLPEDINIEDYDEELKDSEESYKIALENLKMHRTTLEFN
LKALEVAEKENCCYLCQRHFENKESSSRLIKNLQDRTDKNLQKALETTAEEVKIYLDDLK
SCYDDVISYRNSIKEKNSLEKKYIEVKKDHDEKSNIQRKCVLELQELQHKFSTISDKIQP
CINKLVNFNEEKLRISLELNRVEEELSIYTSQEVLESIEELQQKQKYINDRLRTLRKDIS
DTQSQKEDKSREYNNLLTLIREKNSDINRMETLLQERNGVIKELEANQDIIKSSEKESSI
LTEEVQNLKKEIKSHTEVLDEMKKRNRNMELEARDKRDKIQNQITLVTDISKTIKDFEEN
DSKRLTQCTELLEQHRNAILIKEKDLKDVETLINVDNQRLKDSDKEFKNIKLNIDLCDLK
TQLESFDRELSSLDVATAEKEREKYQEESLRLRSAYEKLSAENAGKLGEIKQLQNQIKTL
TTQINTDYKNVDELYQREWIKLQTKSLVTDDIDTYSRALDSAIMRYHSLKMKDINRIIDE
LWKRTYSGTDVDTIKIKTDEVSNVRGKTFNYRVVMYKQDAELDMRGRCSAGQKVLAAIII
RLALSETFGVNCGVIALDEPTTNLDEENIESLARSLGNIIEVRRHQTNFQLIVITHDEKF
LNYMNASSYTDHFYKVKRDDRQKSLIEWVDINKVSS
NT seq
3891 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcgatatataagctttcaattcaagggattcgctcttttgattcaaacgacaga
gagacgatagaattcgggaaaccgctaacattaattgttggtaccaatgggtcaggtaaa
acaactattatagaatgtttgaagtatgcaacgacaggtgatctaccaccaaactctaaa
aacggtgcctttattcatgatccaaaaatcacaggcgagaaggatattcgagcgcaggtg
aaacttgcattcgtcaatgcaaagggagttaatatgattgttaccaggaatattcagtta
cttgcaaagaaaaatgctaacacatttaagactttagaaggtcaattggtggcgatcaat
cgtggcgaacggactactttaagtacacgagcaactgagttggatcaacagatcccgtta
tatttaggagttcccaaggcaattcttgactatgtaatattttgtcatcaagaagactca
ttgtggcctcttagcgaaccgtcaatacttaagaaacggtttgatgaaatttttcaagcc
atgaagttcactaaagccttggataatcttaagacgatcaaaaaggatatggcaatagac
atcaaattgctcaaacagtctgtggaacatttaaagactgatagagatagatctaaagca
accaaaatgaacgtttcccagttagaaaataaagttgaagaatatttattggaagtaaag
gatatcgagaagaagttggaagccattacaagtcaatctgatgaacttttcagttcaaat
cagcaatttcaagaagttatatcacgatcggaaagcttacagcgtagcaaatcttcacta
tcagagcaaattcaaagacttcaatcgtcaattgaaattattccaaaatcaaagagcgat
ctccagaatatgctttccaactttgaaggaatattaaaagatatcgattcgaaattgaaa
ggtcactttgaagaaagagaaagaatcgtgtcattccttgaaaaggaaagaactagccaa
caacgggttattcgtcttcaaggtgaattgtgttccaaaaaagaacaatatgaacactca
aagatgaaaaaggaagaactactcaccgaattatcaaacacgtataatattcctaaacaa
aatgtaacttcagaagtttcaaccatgcttaaaatggcaaacgaacgtctaaatactata
cagtataaaaaccagaaggaagaagctgatatcgaggaacaattactcacaagtagaaac
tcactagcaaaaaaagaacaacagctatcatatatatcaagtgatatgaagaaattgcaa
aaccaaatatccaagttgtctaacagatcaaaagatttaaatgtgaacgaaacagaatta
catgttcagaaagagaatcttaaaagttatgaagcgaaattaaggaattgggattctgaa
aatgtaattgaaagtttaatgaatgaaattaaatcaaaaaatcaagatatactttcccta
gaagatcaactggaagctattcaattgcgaataaacaaagtaaaccaacattctgacctc
tttgctaaacattcccttcttaaaggtaatttgagtgccaaattaaaagatataaaaaaa
atggaagaggaaataatgcatgaagccaggaatttaaacgtttctttacggatagatgat
gatcttccggaaagctttaaattagtttacaatgatatgaaagaagaactttcaaagtgt
aaaatggaatgtgatactgccactaaattttctatccaatctgagaatcaaatgaaaaat
ttggaaaaccagattcaagtattaaattctaccacaagtaatctagagttgaaaataaaa
gctgttttgcctgaagatatcaacattgaggattatgatgaggaacttaaagactccgaa
gagtcctacaagattgctctagaaaatttgaagatgcacagaactacacttgaatttaat
ctaaaagcccttgaagtggcggaaaaagagaattgttgctatttatgtcagagacatttt
gagaacaaggaatcttcctctcgcttgattaaaaaccttcaagaccgtactgacaagaat
ctccagaaggctcttgaaactactgccgaagaagtaaaaatatacttagacgatctaaaa
agctgttatgatgatgtgatatcttataggaatagtattaaagaaaagaattcccttgag
aaaaagtatattgaagttaaaaaggatcatgatgaaaaaagtaatatacaacgtaaatgt
gtattagaactccaagaacttcaacacaaattttcaacgatttcggacaaaatacaacct
tgcattaataagcttgtcaatttcaatgaagaaaaattgagaatatcgctggagttgaat
agggttgaggaagaattgagtatatacacttctcaagaagtgttagaaagtatcgaagaa
ttacaacaaaaacaaaaatacataaacgatagactaagaactttaagaaaggacatttct
gatacgcagagtcagaaagaagacaaatcaagggagtataataatttgctgacactaata
agagaaaaaaactcagacattaatagaatggaaaccttattacaagaaagaaatggtgtt
ataaaagaactagaagccaaccaagatattatcaaaagttctgaaaaagaatcaagcatt
ctgacagaagaggttcagaatttgaagaaagaaataaagtctcacacggaggttttggat
gaaatgaaaaaacggaacagaaatatggaattagaagctcgcgacaaacgggataaaatt
cagaatcaaattactctggttacagatataagtaaaacaatcaaagattttgaagaaaat
gactccaaacgccttacccaatgtaccgagttactcgaacaacaccgtaatgcaatattg
attaaagaaaaagatttgaaagatgtagaaactttgataaatgtcgataaccaaaggttg
aaagactccgacaaggaatttaaaaatattaaacttaacattgatttatgcgatctcaaa
actcaacttgaaagttttgatcgtgaactgtctagtttagacgtagctactgctgaaaaa
gaaagggaaaaataccaagaagaatctctaagattgagatctgcatatgaaaaactcagc
gccgaaaatgcagggaagctgggtgaaatcaaacaattacaaaatcaaattaaaacgcta
actacccagattaatacggattataaaaatgttgacgaactttaccaaagagaatggatt
aagctacaaacaaaatcattagtaactgatgatattgatacttattctcgtgcattagat
agtgctattatgagatatcatagcttaaaaatgaaggatattaatcgtatcatcgatgag
ctttggaaaaggacttatagtggtacggatgtcgataccattaaaataaaaacagacgaa
gtctccaatgtgaggggaaaaacgtttaactatagagtagtaatgtataaacaggatgca
gagcttgacatgaggggtcgatgctctgctggacaaaaagttttggccgctattattatt
agattagcattatccgagacgtttggagttaattgcggtgttatagccttagacgaacca
acaacaaaccttgatgaggaaaacatcgagagtttagcccgttcgttaggtaatattatt
gaagttaggagacatcagacgaatttccaattaattgtaattactcatgacgagaagttt
ctcaattatatgaatgcttcaagttatacagaccatttctacaaagttaaaagggatgat
agacaaaaatcactgattgaatgggtagatatcaacaaggtaagtagttaa
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integrated database retrieval system
