Kluyveromyces marxianus: KLMA_10158
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Entry
KLMA_10158 CDS
T05269
Symbol
RRP43
Name
(RefSeq) exosome complex component RRP43
KO
K12586
exosome complex component RRP43
Organism
kmx
Kluyveromyces marxianus
Pathway
kmx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kmx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KLMA_10158 (RRP43)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kmx03019
]
KLMA_10158 (RRP43)
Messenger RNA biogenesis [BR:
kmx03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
KLMA_10158 (RRP43)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
34713839
NCBI-ProteinID:
XP_022673694
UniProt:
W0T2Z6
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All DBs
Position
1:332562..333854
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AA seq
430 aa
AA seq
DB search
MLLKASNLKVLEKKKKIFNSSHLIASNMKGRIINRVSEAQLQSIPAMSDADSIEVHPVVF
PPEVLARILPDLSLQRHLSLETRPCSRRFEEFREIKLSDGNIFRYSGNASNNGSNDVIGS
NVLRAGKTFIMTSITGGIIEETLSAGSNDIGEEELIEIATEENKLSENATVFPVVEVHRG
RVGGPTDEEMITSEKLHKTLLHSGLLKKKALAVSCGIRRTDENGNVSIIYDDEALEEDKK
INESINRKWSYVLYAKIQVFSRSGPIFDLCWNSLISALKSVKLPRAFLDERAADLKIAVR
TRGRSMTIRETYDILCDPKKYLPLELNESQLAFGSNFGIVDIDPLAELDHEEESNADKME
VTDKKSVLLADIETEAEETSIQSTLTFITSKDGMMKNATVIGGGSKITPSMIRRCITLSK
QRADDIQSKI
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgttgcttaaagcttcaaaccttaaagtattagaaaagaaaaaaaaaatcttcaactct
tctcatctcatcgcatcgaatatgaaaggaagaatcataaacagagtatccgaagcccaa
ctccagtccataccagcaatgtctgacgctgattctatcgaagtgcaccctgtggtattt
ccaccggaagttcttgctcgaattttacctgatctttcgttgcaaagacacctttcatta
gaaactagaccatgttcaagaagatttgaggaattcagagagataaaattaagcgatggt
aatatattccgctatagtggaaatgcttcaaataacggatctaatgatgtaattggatct
aatgttcttcgtgctggtaagactttcataatgacctctataacaggtggtattatagaa
gagacattatctgctggtagcaatgacattggcgaggaagaactaatcgaaatagcaaca
gaagagaataagctatcagaaaatgcaaccgtatttcctgtagtcgaagttcatcgtggc
cgtgtcggtggccctactgatgaagaaatgataacatctgagaagcttcacaaaacactt
ttacactctggtcttctcaagaagaaagcattagctgtgtcatgtggaattcgtagaacg
gatgagaatggaaatgtgtcgataatatatgacgatgaagcattggaagaagataagaaa
atcaatgaatctatcaatagaaagtggtcttacgtgttgtatgcaaaaatccaagtcttt
agtcgtagtggcccaatatttgatttatgctggaattctttgataagtgcattgaaatca
gtaaaactaccaagagcattcctagacgaacgagctgcagatcttaaaattgcagtgaga
acaagaggacgcagcatgacaattcgtgaaacgtatgacatcctttgcgatcctaagaaa
tatctaccattagaactaaatgaatctcaactagcgtttggatctaatttcggaatagtt
gatatagatcctctagctgaacttgatcatgaggaagaatcgaatgccgacaaaatggaa
gtcactgacaaaaagtccgtcttactagctgatatcgaaactgaagcagaagaaacatca
atccaatctacgttgacctttattacaagtaaagacggtatgatgaaaaatgcgacagtc
attggtggtggatctaagattactccttcaatgattagaagatgtattactctatctaag
cagcgggctgatgacatccaatcaaagatataa
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