KEGG   Kluyveromyces marxianus: KLMA_10698
Entry
KLMA_10698        CDS       T05269                                 
Symbol
SUB2
Name
(RefSeq) ATP-dependent RNA helicase SUB2
  KO
K12812  ATP-dependent RNA helicase UAP56/SUB2 [EC:5.6.2.7]
Organism
kmx  Kluyveromyces marxianus
Pathway
kmx03013  Nucleocytoplasmic transport
kmx03015  mRNA surveillance pathway
kmx03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:kmx00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    KLMA_10698 (SUB2)
  09122 Translation
   03013 Nucleocytoplasmic transport
    KLMA_10698 (SUB2)
   03015 mRNA surveillance pathway
    KLMA_10698 (SUB2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:kmx03019]
    KLMA_10698 (SUB2)
   03041 Spliceosome [BR:kmx03041]
    KLMA_10698 (SUB2)
Enzymes [BR:kmx01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     KLMA_10698 (SUB2)
Messenger RNA biogenesis [BR:kmx03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     KLMA_10698 (SUB2)
Spliceosome [BR:kmx03041]
 Complex C
  Other components
   EJC/TREX
    KLMA_10698 (SUB2)
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    KLMA_10698 (SUB2)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII Cas3-like_C_2 ANAPC_CDC26
Other DBs
NCBI-GeneID: 34714352
NCBI-ProteinID: XP_022674209
UniProt: W0T4L3
LinkDB
Position
1:1467635..1468948
AA seq 437 aa
MSHEAEEDLLEYSDNEQEVQVDNKAAEVNAESNGESQDKDADKKGSYVGIHSTGFKDFLL
KPELSRAIIDCGFEHPSEVQQHTIPQSIHGTDVLCQAKSGLGKTAVFVLSTLQQLDPVQG
EVSVVVLCNARELAYQIRNEYLRFSKYMPDVKTAVFYGGTEYKNDIDLLAKKETVPHIIV
ATPGRLKALVRDKYIDLSHVKNFVIDECDKVLEELDMRRDVQDIFRATPRDKQVMMFSAT
LSQEIRPICRRFLQNPLEIFVDDEAKLTLHGLQQYYIKLDEKEKNRKLAQLLDDLEFNQV
IIFVKSTARANELTKLLNASNFPAITVHGHMKQEERIARYKAFKEFEKRICVSTDVFGRG
IDIERINLAINYDMPNEADQYLHRVGRAGRFGTKGLAISMISSPEDEQVLAKIQERFDVK
ITEFPEEGVDPSTYLNT
NT seq 1314 nt   +upstreamnt  +downstreamnt
atgtcacacgaagcagaagaggatttattggaatactctgacaacgaacaagaagttcaa
gttgacaacaaagcagccgaagtcaatgctgagagcaacggcgaaagccaagacaaggat
gccgataagaagggttcttatgtcggtattcactctactggtttcaaggatttcttgttg
aagcctgaattgtcgagagctatcatcgattgtggtttcgaacatccttctgaagtgcaa
caacacaccattcctcagtctatccacggtacggatgtcttgtgccaagccaagtctggt
ttgggtaagactgctgtgttcgttttgtccactttgcagcaactagacccagttcaaggt
gaagtcagcgttgttgtgttgtgtaacgctagagagttggcctaccaaattagaaacgaa
tacttgagattctctaaatatatgcctgacgtcaagactgctgtcttctacggtggtact
gaatacaagaatgacatcgatttgttggccaagaaggaaaccgtcccacacattatcgtt
gcaacccctggtcgtttaaaggctttggttagagataagtacatcgacttgtcccacgtt
aagaacttcgttattgacgaatgtgacaaggttttggaggaattggacatgagaagagac
gtacaagacatctttagagcaaccccaagggataagcaagtcatgatgttctccgctact
ttatctcaagagattagacctatctgcagaagattcttgcaaaatccattggaaatcttc
gtcgatgacgaggctaaattgactctacacggtctacaacaatactacattaaactagac
gaaaaggaaaagaaccgtaagctagctcaattgctagacgacttggaattcaaccaagtt
atcattttcgtgaagtccactgcaagagctaacgaactaaccaaactattgaacgcctct
aacttcccagctatcactgtgcatggtcacatgaagcaagaagaacgtattgcccgttat
aaggcattcaaagaattcgaaaagcgtatctgtgtgtctactgacgtgttcggtagaggt
atcgatattgaacgtatcaacctcgctatcaactacgatatgccaaacgaggcagaccaa
tacctacatcgtgttggtagagctggtagatttggtactaagggtttggctatctccatg
atttctagcccagaagatgaacaagtcttggctaaaattcaagagagatttgacgttaag
attactgaattcccagaagaaggtgttgatccatctacttacttgaacacttga

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