Kluyveromyces marxianus: KLMA_20594
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Entry
KLMA_20594 CDS
T05269
Symbol
YRA1
Name
(RefSeq) hypothetical protein
KO
K12881
THO complex subunit 4
Organism
kmx
Kluyveromyces marxianus
Pathway
kmx03013
Nucleocytoplasmic transport
kmx03015
mRNA surveillance pathway
kmx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
kmx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
KLMA_20594 (YRA1)
09122 Translation
03013 Nucleocytoplasmic transport
KLMA_20594 (YRA1)
03015 mRNA surveillance pathway
KLMA_20594 (YRA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kmx03019
]
KLMA_20594 (YRA1)
03041 Spliceosome [BR:
kmx03041
]
KLMA_20594 (YRA1)
Messenger RNA biogenesis [BR:
kmx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
KLMA_20594 (YRA1)
TREX complex
KLMA_20594 (YRA1)
Spliceosome [BR:
kmx03041
]
Complex C
Other components
EJC/TREX
KLMA_20594 (YRA1)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
KLMA_20594 (YRA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_PARP14_3
FoP_duplication
RRM_3
Motif
Other DBs
NCBI-GeneID:
34715056
NCBI-ProteinID:
XP_022674911
UniProt:
W0T606
LinkDB
All DBs
Position
2:complement(join(1221112..1221525,1222832..1223086))
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AA seq
222 aa
AA seq
DB search
MSALDQSLDEIIGSAKQARRNNKTGPKKVSKNINRNRPRPGTGPAKGPKKGPTAAALVPA
LLRAPLSTRVNVEGLPRDINQDAVKEFFNHQVGGVQKALLSYNERGNSTGMATITFKNVE
QANLAVKKFNNAPIDGGKSKLRLTLIVDPSQKTLLDRIRPVQNVAAKNAAKKQVPAKAQP
KKKTAGPNKKAIAAKQKKRAKPEKKSLEDLDKEMADYFEESK
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atgtccgctttagatcaatctttggatgaaattattggttctgctaagcaggccagaaga
aacaacaagaccggcccaaagaaggtttctaagaatatcaacagaaaccgtcctagacca
ggaactggtccagccaagggtccaaagaagggtcctaccgctgctgccctagtgccagca
ttgctaagagcccctctatctaccagagttaatgtcgaaggtttgccaagagacattaac
caagatgctgtcaaagaatttttcaatcaccaagtcggtggtgtccaaaaggctttgttg
agttataacgaaagaggtaattccactggtatggctactatcactttcaagaacgttgaa
caagccaacctagctgtcaagaaatttaacaatgctccaatcgatggtggtaaatcaaag
ctaagattaactctaattgttgatccaagccaaaagactctattggacagaattcgtcca
gtccaaaatgttgcggccaagaacgctgctaagaagcaggtaccagcaaaggctcaacca
aagaagaagacagcaggtccaaacaagaaggccattgcagccaagcaaaagaagagagca
aagccagaaaagaagtctttggaagacttggacaaggaaatggccgactactttgaagaa
tctaagtaa
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integrated database retrieval system
