Kluyveromyces marxianus: KLMA_20628
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Entry
KLMA_20628 CDS
T05269
Symbol
RPD3
Name
(RefSeq) histone deacetylase RPD3
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
kmx
Kluyveromyces marxianus
Pathway
kmx03082
ATP-dependent chromatin remodeling
kmx03083
Polycomb repressive complex
kmx04213
Longevity regulating pathway - multiple species
Brite
KEGG Orthology (KO) [BR:
kmx00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
KLMA_20628 (RPD3)
03083 Polycomb repressive complex
KLMA_20628 (RPD3)
09150 Organismal Systems
09149 Aging
04213 Longevity regulating pathway - multiple species
KLMA_20628 (RPD3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
kmx03036
]
KLMA_20628 (RPD3)
Enzymes [BR:
kmx01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
KLMA_20628 (RPD3)
Chromosome and associated proteins [BR:
kmx03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
KLMA_20628 (RPD3)
HDAC complexes
Sin3A-HDAC complex
KLMA_20628 (RPD3)
BRAF-HDAC complex
KLMA_20628 (RPD3)
REST complex
KLMA_20628 (RPD3)
SHIP complex
KLMA_20628 (RPD3)
MiDAC complex
KLMA_20628 (RPD3)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
KLMA_20628 (RPD3)
Heterochromatin formation proteins
Other heterochromatin formation proteins
KLMA_20628 (RPD3)
Chromatin remodeling factors
NuRD complex
KLMA_20628 (RPD3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
34715089
NCBI-ProteinID:
XP_022674944
UniProt:
W0T8D7
LinkDB
All DBs
Position
2:1293385..1294683
Genome browser
AA seq
432 aa
AA seq
DB search
MVYETKPFDPITVKPNEKKRVAYFYDADVGNYAYGAGHPMKPHRIRMTHSLIMNYGLYKK
MEIYRAKPATKQEMCQFHTDEYIDFLSRVTPDNLDMFQKESVKFNVGDDCPVFDGLYEYC
SISGGGSMEGAARLNRGKCDVAINYAGGLHHAKKSEASGFCYLNDIVLGIIELLRYHPRV
LYIDIDVHHGDGVEEAFYTTDRVMTCSFHKYGEFFPGTGELRDTGVGKGKYYAVNVPLRD
GIDDATYKSVFEPVIGKIMEWYQPSAVVLQCGGDSLSGDRLGCFNLSMKGHANCVNYMKS
FGVPLMIVGGGGYTMRNVARTWAFETGILNNVILDEELPYNDYYEYYGPDYKLDVRPSNM
YNVNTPEYLDKVLMNIFSNLEHTKYAPSVQLNHVPKDPEDKGDEEEDTAAAKDTRGGSQY
ARDNTIEHENDF
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atggtgtacgagactaaaccatttgatcctataacggtaaaaccgaatgaaaagaagaga
gtcgcatacttctatgatgcggatgtggggaattacgcttatggtgcaggtcatccaatg
aaaccacatagaataagaatgacccattctttgattatgaactatggtctttataagaag
atggaaatatatagagccaaacctgccacgaaacaagagatgtgccaatttcatacggac
gaatacattgatttcttatctcgggtgacgccggataacttggacatgttccaaaaggag
agtgtgaaattcaatgtcggtgatgactgtcctgtgtttgatggtttgtatgagtattgt
agtatttctggtggtggttcgatggaaggtgcagcaaggctcaatcgtgggaagtgtgat
gttgcgattaattatgcaggaggtttacatcatgcaaagaaatcagaagcttctggtttc
tgttatctaaatgatatcgtgttgggtattattgaattgctaaggtatcatccacgtgtg
ttgtatatcgacattgacgttcatcatggtgatggtgttgaagaagccttttatactacc
gatcgtgttatgacctgttctttccataaatatggtgaatttttccctggtaccggagag
ttgagagacacaggtgttggtaaaggtaaatattatgcggtcaatgttccactgagagat
ggtatagatgatgccacctacaagtcggtctttgaaccagtgattggtaaaataatggaa
tggtatcaaccctcagcagtggttcttcagtgtggtggtgactctttatctggggatcgt
ttaggttgctttaatctatcaatgaagggacacgctaactgtgttaactatatgaaatcg
tttggtgttccattaatgatcgttggtggtggtggttacactatgagaaacgttgcgcgt
acttgggccttcgaaacaggtatcctaaataatgttattttggatgaagaactaccttat
aatgattactacgagtactatggacctgattacaaacttgatgttaggccatcgaatatg
tacaacgtcaatacaccggagtatttggataaagttttgatgaatatcttcagtaacttg
gagcataccaaatatgctccaagtgttcaactaaatcacgttcctaaagatcctgaagat
aagggtgatgaagaagaagatactgcagctgctaaggatactagaggtggatctcaatat
gcaagggacaacactatcgaacatgaaaacgatttctag
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