KEGG   Kluyveromyces marxianus: KLMA_30222
Entry
KLMA_30222        CDS       T05269                                 
Symbol
DCAF13
Name
(RefSeq) protein SOF1
  KO
K11806  DDB1- and CUL4-associated factor 13
Organism
kmx  Kluyveromyces marxianus
Brite
KEGG Orthology (KO) [BR:kmx00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:kmx03009]
    KLMA_30222 (DCAF13)
   04121 Ubiquitin system [BR:kmx04121]
    KLMA_30222 (DCAF13)
Ribosome biogenesis [BR:kmx03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    KLMA_30222 (DCAF13)
Ubiquitin system [BR:kmx04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     KLMA_30222 (DCAF13)
SSDB
Motif
Pfam: WD40 Sof1 WD40_Prp19 Beta-prop_EML_2 WD40_CDC20-Fz WD40_WDHD1_1st WDR55 Beta-prop_EIPR1 EIF3I Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML WD40_MABP1-WDR62_2nd WD40_RFWD3 Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C Beta-prop_NUP159_NUP214 Beta-prop_WDR75_1st ANAPC4_WD40 WDR90_beta-prop_4th Beta-prop_IFT140_1st NBCH_WD40 Beta-prop_SCAP Beta-prop_HPS5 Beta-prop_DCAF12 Beta-prop_Vps41 Beta-prop_IFT122_1st Beta-prop_DCAF4 Beta-prop_NOL10_N WD40_like Ge1_WD40 CsoSCA_N Beta-prop_WDR11_1st
Other DBs
NCBI-GeneID: 34715506
NCBI-ProteinID: XP_022675361
UniProt: W0T7C0
LinkDB
Position
3:483633..485066
AA seq 477 aa
MKIKTISRSADDYVPVKSTQESQLPRNLDPALHPFERAREYTKALNATKLERMFAKPFIG
QLGYGHRDGVYTIAKNYNVLNKLATASGDGIIKYWNMSTREELSSFKAHYGMVTGLCVTP
LHLSPQRENFMLSCGDDKTVKLWSVNSDDFANVKDDTRLNNEHGIIKTFHGEHAFQSLDH
HRQKSNFVTGGAQIELWDTNRSKPISNLSWGADNINHVRFNQNEVDILASTGSDNSVVLY
DLRTNSPTQKIVQTMRTNSICWNPVEAFNFVIANEDHNAYYYDMRNMSRALHVFKDHVSA
VMDVDFSPTGDEVVTGSYDKTIRIYQVKHGHSREIYHTKRMQHVFQVKYTMDSKYIVSGS
DDGNVRLWRAKAWERSNAKSTREKNKLEYDEKLKERFKHMPEVKRISRHRHVPKVVKKAQ
EIKKIEIDSLKRRERNERRTRKDMPFVPERKKQIVGTVFQYEDKQKDNSKSTNSDDE
NT seq 1434 nt   +upstreamnt  +downstreamnt
atgaagatcaaaactatcagcagaagtgcagacgactatgttcctgtaaagagcactcaa
gaatcacaactgcctcgtaacttggatccagctttgcatccattcgaaagagccagagaa
tatacaaaagctttaaatgcaaccaaactcgagagaatgtttgcaaaaccatttattggt
caattaggttatggtcatagagatggtgtttatactattgcaaagaactataacgtgctt
aataagcttgctactgcgagtggtgatggtatcattaaatactggaatatgtctactaga
gaagaattgagttcgtttaaagcacattatggtatggtaacagggttatgtgtgactcct
ttacacctatctcctcaaagggaaaacttcatgttatcctgtggtgatgataaaactgta
aagttatggtccgttaactcagatgactttgctaatgtcaaagatgatactagattgaat
aacgaacatggtatcatcaagactttccatggtgagcatgcattccaatccttagatcac
cacagacaaaaatctaactttgttactggtggtgctcagatagaactttgggatactaat
aggtccaaaccaatttcaaacctttcttggggtgcagacaacataaatcacgttagattc
aatcaaaacgaagttgatattttagcaagtacgggtagtgataattctgtggtactttat
gatttaagaaccaattctccaactcaaaaaattgttcaaacaatgagaacgaactctatt
tgttggaatccagtggaagccttcaactttgtgattgctaatgaagatcataacgcgtac
tactacgatatgagaaatatgtctagggccctacacgtgtttaaggatcatgtcagtgct
gtcatggatgttgatttctcaccaacaggtgacgaagtcgtaactggttcttacgataag
acgataagaatttatcaagtcaaacacggtcactcaagagaaatttaccatacaaagaga
atgcaacatgtgttccaagtgaagtacactatggacagtaaatatatagtaagtggttca
gatgatggtaacgttagactatggagagctaaggcatgggagagatcaaatgctaagagt
acccgtgaaaagaataaactagagtatgatgaaaagctcaaggagagattcaaacacatg
ccagaagtcaagagaataagtagacacagacatgttcctaaggttgttaagaaggctcaa
gaaattaagaagatagaaatcgattcgttgaagagaagagagagaaacgaaagaagaaca
cggaaagatatgccctttgtaccagagagaaagaaacagattgtcggtactgttttccag
tacgaggataaacaaaaggacaattctaaatctaccaattcagatgatgagtag

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