Kluyveromyces marxianus: KLMA_30423
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Entry
KLMA_30423 CDS
T05269
Symbol
SSD1
Name
(RefSeq) protein SSD1
KO
K18748
protein SSD1
Organism
kmx
Kluyveromyces marxianus
Brite
KEGG Orthology (KO) [BR:
kmx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kmx03019
]
KLMA_30423 (SSD1)
Messenger RNA biogenesis [BR:
kmx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
KLMA_30423 (SSD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
Dis3l2_C_term
OB_Dis3
CSD2
Rrp44_CSD1
Motif
Other DBs
NCBI-GeneID:
34715699
NCBI-ProteinID:
XP_022675554
UniProt:
W0T9I6
LinkDB
All DBs
Position
3:complement(939829..943368)
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AA seq
1179 aa
AA seq
DB search
MSDQERFVKTTGGKGNPKQIHIAHRKSPSELTNLMIEQFTLQKQAENDNSGGSSSSQNQG
AGSFLPQPPNVPYQLSPNSGGRKGRSHSRSGSAYYNNNDHKQNTPATGHRRTGSQTSVYG
HSRRQSIGLNEAKRAAAEEQAKRESCPHIKVDNPQDIPKLANENEQTSYKFPGSPPPTDS
KNNSHRRTQSNMSPNRAFQFPPAKVNQKENNDDFIPVGTPHRRTNSRNEGIDGNWRVQQQ
QQMSPFYHSRTHSREFSGHPGLEPPPIFQPGHKSRGSNASTHSFNSANGQQQQNSNGRKS
LFAPYLPQANIPQLIEEGKLVAGILRVNKKNRSDAWVSTNGVLDADIFICGSKDRNRALE
GDLVAVELLLVDDVWESKKEKEEKKRRKDASAQQDIIPLDSKDDYHNDASTSIVSGTTAS
TESKDTDNTLGSSSGSIKRRGSLKQRPTQKKNDDVEVEGQSLLLVEEEEINDDYKPLYAG
HVVAVLDRIPGQLFSGTLGLLRPSQQANNDVNKPNKPKIVWFKPTDKKVPLIAIPIEQAP
KDFVENADKYQNKVFVASIKRWPITSLHPFGTLVSQLGELNDPKTEIDAILRDNNFLSDE
YLDPRDRTKERDSFQPVILSQEETNSRRLYENVIAISETGELSNYSVHLRDTENGNIELG
FHVVDVTLHIEESSSLDRRARKRSSAVFMPQTTVHLLPASLNEFLSLQPDKISNTLSVVY
ELHPENFDVISTWIGETRVKPTTTLTHERLNQELEKPASSRSKFVDKLESVARNFHHYRL
NSKTADLYRTLPLLESLDDEKVKPDLNILQRSKALALLSEIERKVNNTVATRLFTSLGDV
AFLRRQPEPISTKLKTFQKKVEKLGVPMDVMSSESVLNSILAIDDDITRMAIELFLSKTL
TPAKYFISGKVEPDQFAHYSLNLPLYTHFTAPLRRYSDHVVHRQLKSIINGSEYKETVDA
LKITSEYCNFKKDCAHHAQEQAIHLLLCKTTNDMGNQHGQILTLATVLQVYESSFDVFIP
ELGIEKRVHGDQLPLVKAEFDMAERVLELYWKKGVDSATFVPTDEQNPKSYRNSIKNKFN
SSSKEIAVNQSVLQNKLVSEEFSKELKELNLIPPTLKLPKSNIEDALEKYLEVAVTRQEG
DNNIQEIRELQQVPILLRAEIGMALPCLTVRALNPFMRS
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaccaggagagatttgtgaaaacaacagggggcaagggtaatcccaagcaaatc
catattgcgcacaggaagtcgccctctgaacttaccaatctaatgattgaacaatttaca
ttgcaaaaacaagccgagaatgataacagtggcggaagttcttcttcccagaaccaaggg
gcgggctcttttttaccacaaccacctaacgttccataccaactgtctcctaactcagga
ggtagaaagggaagatcccactctagaagtggctctgcatattacaacaataacgatcat
aaacaaaacacccctgctacaggccataggagaaccggttcacaaaccagtgtttatgga
cattctaggagacaatccatcggtttgaacgaagcaaagagagcagcagctgaagaacaa
gcaaaaagagaaagttgtcctcacattaaagttgataatcctcaagatatcccaaaactt
gctaacgaaaacgaacaaacaagctataagttccctggatcgccaccacctacggatagc
aagaataatagccaccgtagaacccagtctaatatgtcacctaatagggcttttcaattc
cctccagccaaggttaatcaaaaggaaaataatgatgatttcataccggttggaactccg
caccgtagaacaaattcaagaaatgagggtatagatggtaactggagagtgcaacagcag
cagcaaatgtcgccattctatcattccagaactcattccagagagttttctggccatcca
gggttagaaccaccaccaatttttcagccaggtcataaatctcgtggttctaatgcctct
acgcatagctttaactctgctaatggacagcagcaacaaaattccaacggccgtaaatct
ctcttcgcgccatatttaccacaagctaatatccctcaattaatcgaagaaggtaaacta
gtagcagggattctaagagttaataagaagaataggtcagatgcatgggtttcgaccaat
ggtgtcttagatgccgatattttcatttgtggctctaaagaccgtaatagagcactagaa
ggtgacctagtcgctgttgaacttctattggtggacgacgtctgggagtctaaaaaggaa
aaggaagaaaagaaaagaagaaaggacgccagtgctcaacaagatattattccgttagac
tctaaagacgactaccacaatgatgcttccacgagtatcgtttctggtacaacagcatcg
actgaaagtaaggatacagataatactttgggctcttcatctggatccatcaagagaaga
ggttcattgaaacaacgccctactcagaagaaaaatgatgatgtagaagttgaaggtcag
tccttattattagtcgaagaggaggaaattaatgatgactataaacctttatacgctggt
catgttgttgcagtgttggatcgtattcctggtcaattattcagtggtactctaggtctt
ctaagaccatctcaacaagccaacaatgatgtaaataaaccaaataagccaaagattgtt
tggttcaaaccaactgataagaaggtgccattgattgctattcctattgaacaagcacca
aaagacttcgtggaaaatgcagataagtatcagaacaaagtgtttgttgcaagtattaaa
cgttggcccattacatcgttgcatccctttggtactcttgtatctcaattgggtgaacta
aatgatccaaaaactgaaatagacgctatcttgagagacaataatttcttgagcgatgaa
tatttagaccctcgtgaccgtaccaaagaaagagacagtttccaaccagtgattctttca
caggaagaaactaacagtagaagattgtatgagaatgtcattgctatatctgagacggga
gaattatcaaattactctgtccacttaagagatactgaaaatggtaacattgaactagga
ttccacgttgtagacgttacccttcatattgaagaaagctcatcgttggatagaagagct
agaaagagatccagtgctgttttcatgcctcaaacaaccgttcatttgttgcctgcttcc
ttgaatgaattcttgagtttgcaaccagacaaaatttccaacacgctcagtgtcgtttat
gaattgcacccagaaaatttcgacgtcatctcaacttggattggtgaaactcgtgtcaag
ccaactactaccctaactcatgaaagattaaaccaagagcttgaaaaaccagcgtcatca
aggtcaaagttcgtggataagctagagtcagttgctcgtaacttccatcattacagattg
aactcgaagacagcggatttgtacagaactttaccactcttggaatctttagatgatgaa
aaggtaaaacctgacttgaatatcttacaacgttctaaggcgctagcacttctgtccgaa
attgaacgtaaggtgaacaatacggttgctacacgtttgtttacttctttgggagatgta
gcattcttgagaaggcagccggaaccaatatctactaaattgaagactttccaaaagaag
gttgagaaacttggtgttccaatggatgtgatgagttccgaatctgtcctaaattcgatt
ctagcaattgatgacgatataacgagaatggctattgaactatttttgtcgaagacgtta
accccggcaaaatatttcatatcaggaaaggttgagccagatcaattcgcgcactactct
ctaaatttaccattgtatacacactttaccgcaccattgagaagatactctgaccatgtt
gttcatagacaattgaagagtattataaatggttctgaatacaaggaaactgttgacgcc
ttgaaaattacatctgaatattgtaatttcaagaaggattgtgcacatcatgcacaggag
caagcaattcatctgttactttgtaagacaacaaacgatatgggcaaccagcacggacaa
atcttaactctggctaccgttttacaagtttatgagtcgtcctttgacgtttttatccca
gagttggggattgaaaaaagagttcatggtgatcagctcccacttgtaaaagcagaattt
gacatggctgaaagggttctggaactttactggaagaagggtgtcgatagcgcaacattt
gtgccaactgatgaacaaaatcctaaatcgtacagaaactccatcaaaaacaaatttaac
tcaagtagtaaggaaattgctgttaaccaatctgtcctacagaataaattagtaagcgag
gagttcagtaaagaattgaaagaattaaatctaattccaccaacattaaaactaccaaaa
tccaacatcgaagatgctttggaaaagtatttggaagttgcagttaccaggcaagaaggt
gataacaatattcaagaaattagagaattacaacaggttcctattctcttgagagcagaa
attggtatggccttaccttgcttgactgtacgtgcattaaacccatttatgagaagttaa
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