KEGG   Kluyveromyces marxianus: KLMA_30661
Entry
KLMA_30661        CDS       T05269                                 
Symbol
SYF1
Name
(RefSeq) pre-mRNA-splicing factor SYF1
  KO
K12867  pre-mRNA-splicing factor SYF1
Organism
kmx  Kluyveromyces marxianus
Pathway
kmx03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:kmx00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    KLMA_30661 (SYF1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:kmx03019]
    KLMA_30661 (SYF1)
   03041 Spliceosome [BR:kmx03041]
    KLMA_30661 (SYF1)
Messenger RNA biogenesis [BR:kmx03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     KLMA_30661 (SYF1)
Spliceosome [BR:kmx03041]
 Complex B
  Other components
   Prp19-related factors
    KLMA_30661 (SYF1)
 Complex C
    KLMA_30661 (SYF1)
SSDB
Motif
Pfam: HAT_Syf1_CNRKL1_C HAT_Syf1_CNRKL1_N HAT_PRP39_C HAT_PRP39_N TPR_14 HAT_Syf1_M TPR_15 SR1P
Other DBs
NCBI-GeneID: 34715930
NCBI-ProteinID: XP_022675787
LinkDB
Position
3:1415832..1418333
AA seq 833 aa
MAYQRHGIDEKFRDEILALKEGQYECFIKDEDIPFEYSVVRDGKNAVAWSRYLSTKRNTG
DEVNLNWLYERCLQEINDDWKIWKEFLSWRISLLNDCNVEIYYKEYDKVTGLFNKCLSSP
CRKSKDLWIMLFEWLIKLRDLSRIRDYLVEALLELPLEYHQEIWKVLVNFIAEVVLADKN
PRRLSLDEAVDNYAHGYITLSGIDIDFWSSSLLKRYSMICSKDDDDDDIEKLLISVSKTG
DSHAIIETYERLLSDDLQPSRTSLYELYLNYINALIISGQSQKLFAVLKKCSELFPFKKG
EIKSMDVLMSIKNHNISIAEDTLDNLINQTTDINEFVFIYEFWIRLEELLVQEFIQIVRQ
HPLRDNNEAISKSKQHVEKLNYLLSNHAIKLNALQLRQEPNNIDLWLERAKMFKNIEDKA
EVFADAVITVDHKAQSIPGTLGDLWCEYAELFEGDETKKHTLLDRATNVPFKFLMDLENV
WIYWTTSCLKCKNVEEAIELIKIPLTIPDNYELLLKKFANSELPAQAAIFSSKRLWTVYL
CLLEVKGDYDNIKAAYETVISIKTATPFMFISYAKFYDSRGHSAEAFSVLERAVDVFPSD
IKTQIYDIYIEMALKTKLSNERMRDLFESAIKLSDDGEDCLSFFLQYSDFEIKSGFIEKG
VDILRKGAYKCHQIENKCILWEKCLSTSKDMLEINATRELYEQCIETLPNGKTIKFLLDF
ARLEENEKEFERCRALLEHGSKLLKPAQNEELWDYWKNFETLHGTRESFIKMLKIRRFLE
DTMKVDTEEVSKQDNNIQFVKSTSQPKANNAPNETIKSNTDEIDLGSIELEND
NT seq 2502 nt   +upstreamnt  +downstreamnt
atggcgtatcagaggcatggtatagatgaaaagtttagagatgagatcctagcacttaaa
gagggacaatacgagtgctttataaaagacgaagacattccctttgagtatagtgtagtt
cgtgatgggaaaaatgctgttgcttggtcgcgataccttagtaccaagcggaatactggc
gatgaggttaacttaaactggttgtatgagcgttgcttacaagaaattaatgatgattgg
aagatatggaaggagtttctaagttggaggattagtttattgaatgattgcaatgtagag
atctattacaaagaatatgataaggtcacgggtcttttcaataagtgcctatcatctcct
tgtagaaagtcaaaggatctttggataatgctcttcgagtggctcattaaattgagagat
ttgagtagaatcagggattatttggtagaagccttgctagaacttccgttggaataccat
caggaaatatggaaagtattagttaactttatcgctgaggtagtgttagctgacaagaat
ccccgtagactatcccttgatgaagctgtcgataactatgctcatggatatataacctta
tctggaatagatattgatttttggtcgtcttcattgcttaaaagatattcaatgatatgc
agtaaagatgacgacgacgatgatattgaaaagttgctgattagtgtatcgaagactgga
gacagtcacgctattatcgaaacatatgaaagacttttgagtgacgatttacaaccatct
agaactagcctttatgaattatatttgaactatattaacgcattaattataagcggacaa
tcacagaagttatttgccgttctcaaaaaatgttcagagctatttccattcaaaaagggc
gaaataaaatcaatggatgttttgatgtcaatcaagaaccataatattagtatagccgaa
gatacattggacaatttaataaatcaaacaacagacattaacgagtttgtatttatttat
gaattttggattcgtttagaggaactattagtacaagaatttattcagattgtaagacaa
caccctttaagagataataacgaggctatatcgaaatcaaagcaacatgttgaaaagttg
aactatctacttagtaatcatgccatcaagttgaatgctttacaactaagacaagagccc
aacaatatagacctgtggttagaaagagcgaaaatgttcaaaaacatagaggataaggcg
gaagtttttgcagatgccgtaataacagttgatcataaagcacaatcgattcctggtaca
ctaggagacttatggtgcgaatatgcggaactatttgaaggtgatgaaaccaaaaaacat
acactactggatagagcaacaaatgttccctttaaatttttgatggatctagagaatgta
tggatttactggacgacatcttgcttaaaatgtaaaaatgtggaagaggcaattgagctt
ataaaaataccattaactataccagataattatgaattgcttctaaagaagttcgcaaat
tcggaacttccggcccaagctgctattttttcatcaaaacgtctttggactgtatatctc
tgccttctagaagtgaaaggcgattacgataatattaaggcagcatatgagacagtaata
tcaatcaaaaccgctacaccattcatgttcataagttatgccaaattttatgattcgaga
ggacacagtgctgaagcattctctgtattggaaagagctgttgatgtttttccttcagat
ataaaaactcagatatatgatatctatattgaaatggcccttaagaccaaattatcaaac
gagcgcatgcgagatctattcgaatctgctatcaaattgtcagacgatggagaggattgc
ctttcatttttcttgcagtatagcgatttcgaaataaagtctggatttattgaaaagggg
gttgacatattgagaaaaggtgcgtataaatgtcatcagatagaaaataagtgcattctt
tgggagaaatgcctttctaccagtaaagatatgttagagataaatgccacacgtgaatta
tatgaacaatgtattgaaacactacccaacggaaaaacaataaaattcctgttagacttc
gcaagacttgaggaaaacgagaaagaattcgaacgttgcagagctttattagagcacgga
agcaagcttctaaaaccagctcaaaatgaggagctttgggactattggaagaacttcgaa
acgttgcatggtactagggagtcgtttataaaaatgctcaagataagaagattcttagaa
gataccatgaaggttgacactgaggaagtttccaaacaagataacaatattcagtttgtt
aagtcgacttcacagcccaaagcaaataacgcgccgaatgagacaattaaatccaataca
gatgaaattgacttaggatctatagaattggaaaatgactaa

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