Kluyveromyces marxianus: KLMA_30661
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Entry
KLMA_30661 CDS
T05269
Symbol
SYF1
Name
(RefSeq) pre-mRNA-splicing factor SYF1
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
kmx
Kluyveromyces marxianus
Pathway
kmx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
kmx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
KLMA_30661 (SYF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kmx03019
]
KLMA_30661 (SYF1)
03041 Spliceosome [BR:
kmx03041
]
KLMA_30661 (SYF1)
Messenger RNA biogenesis [BR:
kmx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
KLMA_30661 (SYF1)
Spliceosome [BR:
kmx03041
]
Complex B
Other components
Prp19-related factors
KLMA_30661 (SYF1)
Complex C
KLMA_30661 (SYF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
HAT_PRP39_N
TPR_14
HAT_Syf1_M
TPR_15
SR1P
Motif
Other DBs
NCBI-GeneID:
34715930
NCBI-ProteinID:
XP_022675787
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All DBs
Position
3:1415832..1418333
Genome browser
AA seq
833 aa
AA seq
DB search
MAYQRHGIDEKFRDEILALKEGQYECFIKDEDIPFEYSVVRDGKNAVAWSRYLSTKRNTG
DEVNLNWLYERCLQEINDDWKIWKEFLSWRISLLNDCNVEIYYKEYDKVTGLFNKCLSSP
CRKSKDLWIMLFEWLIKLRDLSRIRDYLVEALLELPLEYHQEIWKVLVNFIAEVVLADKN
PRRLSLDEAVDNYAHGYITLSGIDIDFWSSSLLKRYSMICSKDDDDDDIEKLLISVSKTG
DSHAIIETYERLLSDDLQPSRTSLYELYLNYINALIISGQSQKLFAVLKKCSELFPFKKG
EIKSMDVLMSIKNHNISIAEDTLDNLINQTTDINEFVFIYEFWIRLEELLVQEFIQIVRQ
HPLRDNNEAISKSKQHVEKLNYLLSNHAIKLNALQLRQEPNNIDLWLERAKMFKNIEDKA
EVFADAVITVDHKAQSIPGTLGDLWCEYAELFEGDETKKHTLLDRATNVPFKFLMDLENV
WIYWTTSCLKCKNVEEAIELIKIPLTIPDNYELLLKKFANSELPAQAAIFSSKRLWTVYL
CLLEVKGDYDNIKAAYETVISIKTATPFMFISYAKFYDSRGHSAEAFSVLERAVDVFPSD
IKTQIYDIYIEMALKTKLSNERMRDLFESAIKLSDDGEDCLSFFLQYSDFEIKSGFIEKG
VDILRKGAYKCHQIENKCILWEKCLSTSKDMLEINATRELYEQCIETLPNGKTIKFLLDF
ARLEENEKEFERCRALLEHGSKLLKPAQNEELWDYWKNFETLHGTRESFIKMLKIRRFLE
DTMKVDTEEVSKQDNNIQFVKSTSQPKANNAPNETIKSNTDEIDLGSIELEND
NT seq
2502 nt
NT seq
+upstream
nt +downstream
nt
atggcgtatcagaggcatggtatagatgaaaagtttagagatgagatcctagcacttaaa
gagggacaatacgagtgctttataaaagacgaagacattccctttgagtatagtgtagtt
cgtgatgggaaaaatgctgttgcttggtcgcgataccttagtaccaagcggaatactggc
gatgaggttaacttaaactggttgtatgagcgttgcttacaagaaattaatgatgattgg
aagatatggaaggagtttctaagttggaggattagtttattgaatgattgcaatgtagag
atctattacaaagaatatgataaggtcacgggtcttttcaataagtgcctatcatctcct
tgtagaaagtcaaaggatctttggataatgctcttcgagtggctcattaaattgagagat
ttgagtagaatcagggattatttggtagaagccttgctagaacttccgttggaataccat
caggaaatatggaaagtattagttaactttatcgctgaggtagtgttagctgacaagaat
ccccgtagactatcccttgatgaagctgtcgataactatgctcatggatatataacctta
tctggaatagatattgatttttggtcgtcttcattgcttaaaagatattcaatgatatgc
agtaaagatgacgacgacgatgatattgaaaagttgctgattagtgtatcgaagactgga
gacagtcacgctattatcgaaacatatgaaagacttttgagtgacgatttacaaccatct
agaactagcctttatgaattatatttgaactatattaacgcattaattataagcggacaa
tcacagaagttatttgccgttctcaaaaaatgttcagagctatttccattcaaaaagggc
gaaataaaatcaatggatgttttgatgtcaatcaagaaccataatattagtatagccgaa
gatacattggacaatttaataaatcaaacaacagacattaacgagtttgtatttatttat
gaattttggattcgtttagaggaactattagtacaagaatttattcagattgtaagacaa
caccctttaagagataataacgaggctatatcgaaatcaaagcaacatgttgaaaagttg
aactatctacttagtaatcatgccatcaagttgaatgctttacaactaagacaagagccc
aacaatatagacctgtggttagaaagagcgaaaatgttcaaaaacatagaggataaggcg
gaagtttttgcagatgccgtaataacagttgatcataaagcacaatcgattcctggtaca
ctaggagacttatggtgcgaatatgcggaactatttgaaggtgatgaaaccaaaaaacat
acactactggatagagcaacaaatgttccctttaaatttttgatggatctagagaatgta
tggatttactggacgacatcttgcttaaaatgtaaaaatgtggaagaggcaattgagctt
ataaaaataccattaactataccagataattatgaattgcttctaaagaagttcgcaaat
tcggaacttccggcccaagctgctattttttcatcaaaacgtctttggactgtatatctc
tgccttctagaagtgaaaggcgattacgataatattaaggcagcatatgagacagtaata
tcaatcaaaaccgctacaccattcatgttcataagttatgccaaattttatgattcgaga
ggacacagtgctgaagcattctctgtattggaaagagctgttgatgtttttccttcagat
ataaaaactcagatatatgatatctatattgaaatggcccttaagaccaaattatcaaac
gagcgcatgcgagatctattcgaatctgctatcaaattgtcagacgatggagaggattgc
ctttcatttttcttgcagtatagcgatttcgaaataaagtctggatttattgaaaagggg
gttgacatattgagaaaaggtgcgtataaatgtcatcagatagaaaataagtgcattctt
tgggagaaatgcctttctaccagtaaagatatgttagagataaatgccacacgtgaatta
tatgaacaatgtattgaaacactacccaacggaaaaacaataaaattcctgttagacttc
gcaagacttgaggaaaacgagaaagaattcgaacgttgcagagctttattagagcacgga
agcaagcttctaaaaccagctcaaaatgaggagctttgggactattggaagaacttcgaa
acgttgcatggtactagggagtcgtttataaaaatgctcaagataagaagattcttagaa
gataccatgaaggttgacactgaggaagtttccaaacaagataacaatattcagtttgtt
aagtcgacttcacagcccaaagcaaataacgcgccgaatgagacaattaaatccaataca
gatgaaattgacttaggatctatagaattggaaaatgactaa
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