Kluyveromyces marxianus: KLMA_40463
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Entry
KLMA_40463 CDS
T05269
Symbol
SKI2
Name
(RefSeq) antiviral helicase SKI2
KO
K12599
antiviral helicase SKI2 [EC:
5.6.2.6
]
Organism
kmx
Kluyveromyces marxianus
Pathway
kmx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kmx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KLMA_40463 (SKI2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kmx03019
]
KLMA_40463 (SKI2)
Enzymes [BR:
kmx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
KLMA_40463 (SKI2)
Messenger RNA biogenesis [BR:
kmx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
KLMA_40463 (SKI2)
mRNA degradation factors
3'-5' decay
Ski complex
KLMA_40463 (SKI2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
Ski2_N
DEAD
Ski2_beta-barrel
MTR4-like_stalk
Helicase_C
DEXQc_Suv3
ResIII
BrxE
Motif
Other DBs
NCBI-GeneID:
34716449
NCBI-ProteinID:
XP_022676308
LinkDB
All DBs
Position
4:1050724..1054521
Genome browser
AA seq
1265 aa
AA seq
DB search
MTTSSFSTATDLFESLNGLDISDIHEFEDKIITPKGYSQAIEEVEISNRFLHTSNVLDWN
LLDLLQPMPNSNTLQVPSDLNEKNQERNDFIPLSMISCPEPVSRTQYHFHRVGIEGEIST
YEEKVNIEDVLNANSANSLSLTRKINPNGDLIRGTTNQLPFTPGGLDKDVVETGSDSVVA
NNEAGTKLLSRDEFGLFNIPPGLERGITPNIETNNQTTQKELEEIDRLSKLENDEQNKQE
IQKLRDLEHDKISSSAVVDESLGTSEIDELLPVDLNFGRHIRKLNKSSDRVEWAHMVDLN
SNMDNFNDLVPNPARTWPFELDTFQKEAVYHLEQGDSVFVAAHTSAGKTVVAEYAIAMSK
RNMTKTIYTSPIKALSNQKFRDFKEDFDDIDVGLITGDVQINPEADCLIMTTEILRSMLY
RGADLIRDVEFVIFDEVHYVNDQMRGVVWEEVIIMLPQHVKFILLSATVPNTFEFANWIG
RTKQKNIYVISTPKRPVPLEINIWTKKKLIPVINDKREFLPRGFREHKDLLTDSVVSGSD
PRSQQKNGKPSGNQKTITKGSKGVGAKGSNKSSFFKYDGPTKATWYNLLKHLKANDLLPA
VVFVFSKKRCEEYADAVEGADLLNAKERSAIHIFIEKSISRLRKDDRELPQILKIRSLLS
RGIAVHHGGLLPIVKELIEILFAKGFVKLLFATETFAMGLNLPTRTVVFSEISKHDGEKK
RNLLPGEFTQMAGRAGRRGKDKTGTVIVMSYSRPLDEASFKEVTLGIPTRLQSQFRLTYN
MILNLLRIEALRVEEMIKFSFSENSKETLKPEQENMIKELQAKVDLIDISKYSEEDIKEY
ESAYNLISGYSQTCVDIMTEIDETRTIGKRLSVGRFIIFRDKNGNPVAGFVFKSNPPKGT
CVVLKLTRPMLLGSESVNHLPSLFFFANYCSSHLSTWNSIKGCLDLEIQEISIFDIEVIS
KFIFSDVNGKFINSTSEEQRKLACEFLFSVSRRVQKTKDLTLASTPSLKVQQSVLQIQKI
VADLHRLRVVEDETFGKKFEPFYKRFELQKEIKNIYHMMSEQNLSLLPDYESRLSVLKET
GFIDYNNNVLLKGRVACEINTGYELVLTELILDNFLGDFEPEEIVALLSAFVYEGRTREE
EPPVITPRLAKGKEKIKEIYSKMQEVSERYQIPATQEEAEFLEKKRFALLNVIYEWARGL
SFKEIMEMSVEAEGTIVRVISRLDEVCREVRNAAVIIGNSVLHQKMTQAQELIKRDIVFA
ASLYL
NT seq
3798 nt
NT seq
+upstream
nt +downstream
nt
atgactactagtagtttttctactgctacagacctttttgagtcgttaaatggactcgat
ataagtgatatccatgagttcgaggataaaatcataaccccaaaggggtatagccaggct
attgaagaggtagaaatatctaataggttccttcacacttctaatgtcttggactggaac
ttactcgatcttttgcaaccaatgccgaattcaaatacactacaggttccaagtgatttg
aatgaaaaaaaccaggaaagaaatgatttcatacctttaagtatgatttcttgtccggaa
ccggtgagtaggacacaatatcactttcacagagtaggtattgagggtgaaatttctact
tatgaagagaaagttaatatcgaggatgtcttaaatgcaaactccgcaaattctttatca
ctaacaagaaaaatcaatcctaatggggacttgataaggggtaccacaaatcaattacca
tttacacctggtggtcttgataaagatgtagtcgaaacaggatcagactctgtagttgcg
aacaatgaagcaggaacaaagctattatcaagagatgagtttggtctattcaatattccg
ccaggattggaaagaggtatcactccaaacattgaaactaataaccaaacgacccagaag
gagctagaagaaattgatagattatcaaaacttgagaacgatgagcaaaataagcaagag
attcaaaaattaagagatctagaacatgataagatatcttcatctgctgtagttgatgaa
tctctgggtacatcagagattgacgaattacttccagtagatctcaattttggtaggcat
attagaaaacttaacaagtcttcagatagggtggagtgggcgcatatggtagatttgaat
agtaatatggataatttcaatgacttggttccaaatcctgctcgtacatggccattcgag
ctagatacgttccaaaaagaagcggtttatcatctagaacaaggtgattcggtgtttgta
gccgctcatacatctgcagggaaaacagtggtcgcagaatatgcgatcgcgatgtctaaa
agaaacatgacaaaaacaatatacacttctccaattaaagctttgtcaaaccaaaaattc
agagatttcaaggaagatttcgatgatatcgatgttggtttaattacaggtgatgtgcaa
attaatcccgaagcagattgcttgatcatgacaacagaaattttaagatctatgctttac
cgtggagcagatttaatcagagatgtggaatttgttatttttgatgaagttcattacgtt
aatgatcaaatgcgtggtgttgtatgggaagaggtcataattatgcttccccaacatgtg
aagttcatcttgttatcagctactgtgccaaatacattcgagtttgccaattggattggt
agaactaagcaaaagaatatatatgtgatatcaacacctaaacgtcctgtgccattagag
attaatatttggactaagaagaaactaatacctgttataaatgataaaagggaattcttg
ccaaggggttttagagaacataaggatttacttaccgactcagttgtttccggcagtgac
ccaaggagtcaacaaaaaaatggaaaaccatcagggaaccagaagactattaccaaagga
tccaaaggcgttggagcaaaaggttcaaacaaatcatccttttttaagtatgatggtcct
acaaaagctacctggtacaacctactcaaacatctcaaagcaaatgatcttcttccagca
gttgttttcgttttcagcaaaaaaagatgcgaggaatatgctgatgcagttgaaggtgcc
gatctcttgaatgcaaaggagagatctgcaatccatattttcatcgaaaaatctatttct
cgtttaagaaaagatgacagagagcttcctcaaatcttaaagattagatcgctattatca
aggggtattgcagtgcaccacggtggtctcttaccgatagtaaaagaattaattgagatt
ttattcgcaaaaggttttgtaaagcttttgtttgccacagaaacgtttgctatgggtcta
aatttacctacgagaacagtagtgttcagtgagatatctaaacatgatggtgagaaaaag
cgcaatcttctccctggtgaatttactcaaatggcgggaagagctggacgtagaggtaaa
gataaaacagggactgtcattgtcatgtcttatagcagaccccttgacgaagcgtcattc
aaagaagttactttaggtatcccaactcgtttacaatctcagttcagattgacctacaat
atgattcttaatcttttaagaattgaagctttaagagtggaggagatgattaagttctca
tttagtgaaaatagcaaagagactttaaagcctgagcaagaaaacatgataaaagaatta
caagctaaggttgacttaattgatattagcaagtactctgaagaggacattaaggaatat
gaatctgcttataatttaatatctggttattctcagacttgcgttgatattatgaccgaa
attgacgaaacaagaacaataggaaagagattaagtgtaggaagattcataatattcaga
gataaaaatggaaatccagttgcagggttcgttttcaaatctaacccaccaaagggaact
tgtgttgtactaaaactaacacgtccaatgttattgggatctgaaagtgtcaaccacctt
ccatccctattcttctttgctaattactgctcttctcatctatcaacgtggaactctatc
aagggctgcttggatcttgaaatacaagaaatttcaatatttgatattgaggtgatttcg
aagttcatattctcagatgtcaacggtaaatttattaacagcacaagtgaagagcagagg
aaattggcttgtgaattcttatttagtgtctccagaagagtccagaagactaaagatcta
acattagcttcaacaccttcactaaaggttcagcaatctgttttgcaaattcaaaagata
gtagcagacttacatcggctaagagttgttgaagatgaaacatttgggaaaaaattcgaa
cccttctacaagcgctttgagttacaaaaggagataaaaaacatatatcatatgatgtcg
gaacaaaatctcagtctcttgccagattacgaatcacgtctcagcgtattaaaagagaca
ggatttatagactataataacaatgtgttattaaagggaagggtagcatgtgaaataaac
acaggttacgaattagttcttacggaattgatattggacaatttccttggtgactttgag
cctgaagagattgttgctcttttatcagcattcgtttatgagggacgaactagggaagaa
gagcctccagttataactccaagattggctaagggtaaggagaaaattaaggagatctat
tctaaaatgcaagaagtgtcggaaagatatcaaattcctgcaacacaagaggaggcagag
tttttagagaagaagagatttgcattattgaatgtgatatacgaatgggcaagaggtctt
tcatttaaagaaattatggagatgagtgttgaggctgaaggtactatagttagagtaatt
tcaagactagatgaagtttgtcgtgaggtcagaaatgctgcagtcatcattggtaattcc
gtccttcatcaaaagatgacccaagctcaggaactaattaaaagagatattgtgtttgct
gccagtttgtacttatga
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integrated database retrieval system
