Kluyveromyces marxianus: KLMA_40619
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Entry
KLMA_40619 CDS
T05269
Symbol
PRP43
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
kmx
Kluyveromyces marxianus
Pathway
kmx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
kmx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
KLMA_40619 (PRP43)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
kmx03041
]
KLMA_40619 (PRP43)
03009 Ribosome biogenesis [BR:
kmx03009
]
KLMA_40619 (PRP43)
Enzymes [BR:
kmx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
KLMA_40619 (PRP43)
Spliceosome [BR:
kmx03041
]
Complex A
U2 snRNP components
U2 related factors
KLMA_40619 (PRP43)
Complex B
KLMA_40619 (PRP43)
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
KLMA_40619 (PRP43)
Ribosome biogenesis [BR:
kmx03009
]
Eukaryotic type
90S particles
Helicases
KLMA_40619 (PRP43)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
DEAD
Helicase_C
HA2_N
AAA_22
AAA_19
SRP54
Flavi_DEAD
ResIII
AAA_23
nSTAND3
AAA_7
AAA_30
ABC_tran
Motif
Other DBs
NCBI-GeneID:
34716605
NCBI-ProteinID:
XP_022676464
LinkDB
All DBs
Position
4:complement(1388941..1391247)
Genome browser
AA seq
768 aa
AA seq
DB search
MGKRKLSNEHVSAVETSIPEHAAEIAEQRSKEHPLVFEEPLVHHDAGEFSGMVRHQTTAE
EAEKLENASVNPFTGNPYSEKYYGILKVRRDLPVHAQRAEFLKIYQENQIMVFVGETGSG
KTTQIPQFVLFDEMPHLRNTQVACTQPRRVAAMSVAQRVAEEMDVKLGEEVGYSIRFENK
TSNKTILKYMTDGMLLREAMEDHDLKRYSCIILDEAHERTLATDILMGLLKQVVQRRPDL
KIIIMSATLDAEKFQKYFNKAPLLAVPGRTHPVEIYYTPEFQRDYLDSAIRTVLQIHATE
EKGDVLLFLTGEDEIEDAVRKISLEGDQLIREQGCGPLSVYPLYGSLPPHQQQRIFEPAP
ESHNGRPGRKVIVSTNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKASA
QQRAGRAGRTRPGKCFRLYTEEAFKKELIEQSYPEILRSNLSSTVLELKKLGIDDLVHFD
FMDPPAPETMMRALEELNFLACLDDDGNLTPLGRLASQFPLDPMLAVMLIGSPEFSCSEE
ILTIVAMLSVPSVFIRPSKDKKRADDIKSAFAHPDGDHLTLLNVYHAFKSDEAYEYGINK
WCRDNFLNYRSLSAADNIRNQLERLMTRYNLELNTSDYNSPKYFDNIRKALAAGFFMQVA
KKRSGGKGYITVKDNQDVLIHPSTVLGHDAEWVVYNEFVLTSKNYIRTVTSVRPEWLLEV
APAYYNLDHFQKGDIKLSLERIKQKVDKMEELNKERKSKSGKSKKSKK
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaaagaaagttgtctaacgagcatgtttctgctgtcgaaacttcaattccagaa
catgctgccgaaattgctgaacaacgcagcaaggaacatccattagtttttgaagaacca
ctagttcatcatgatgctggtgaattttccggcatggttcgccatcaaactactgcagaa
gaagctgagaaattagagaatgcctctgtgaatccgtttaccggaaacccatattctgaa
aagtactatggaatcttaaaagttagaagagacttgccagtgcacgctcaaagagctgaa
ttcttgaaaatttatcaagaaaaccaaatcatggtgtttgtgggtgaaactggttctggt
aagaccactcaaattcctcaatttgtgttatttgacgaaatgccacatttaaggaatact
caagttgcttgtacacaaccacgtagggttgccgctatgtctgttgcacagagagttgca
gaagaaatggatgtaaagctaggggaagaggttggttactccataagatttgaaaataaa
acttccaataagactattctcaagtatatgactgatggtatgttattaagagaggccatg
gaagaccatgatttgaagcgttactcctgtattattttagatgaagcacacgaacgtacc
ctagctactgatatcttgatgggtcttcttaaacaagttgttcaacgtagacctgatttg
aaaattatcattatgtctgctaccttggatgcagaaaagttccaaaagtatttcaataaa
gctcccttattggccgttccaggtagaacacacccagttgagatctattacacaccagaa
tttcaaagggactatttagacagtgctataagaacagtattgcaaattcatgcaacggaa
gaaaaaggtgatgtgctattgtttttgactggtgaagatgaaattgaagacgccgtaaga
aagatctcactagaaggggatcaattaataagagaacaaggttgtggaccattgtctgtt
tatcctttgtatggttctttgccaccacatcagcaacaacgtatcttcgaaccagctcct
gaatctcataatggtagaccaggaagaaaggttatcgtatcaactaacattgcggaaaca
tctttgactattgacggtattgtgtacgttgttgatcctggtttctcgaagcaaaaggtt
tacaacccaagaataagagtggaatctcttttggtttccccaatttctaaagcttctgct
caacaaagagctggtagagctggtcgtaccagaccaggtaagtgtttcagactttacaca
gaagaagcgtttaagaaagagttgatcgaacagtcatacccagaaattttacgtagtaat
ctttcttctactgttttggagttaaagaagttaggtattgatgatttggttcatttcgat
ttcatggatccgccagctccagaaacaatgatgagagcacttgaagaattgaactttttg
gcttgtctagatgatgatggtaatctaacacctttaggtagattagcttcacaattcccg
cttgatcctatgcttgctgtcatgttgattggctcaccagaattttcatgttcagaagag
attttaactattgtcgctatgttgtcggttccaagtgttttcattcgtccttcaaaagat
aaaaagcgcgctgatgatataaagagtgccttcgcacatccggatggtgaccatttgaca
ttgttgaatgtttaccatgctttcaaatcagatgaagcgtacgaatacggcattaacaag
tggtgtcgtgacaatttcttaaactatagatctttatctgccgctgacaatatccgtaat
caattagaaagattgatgacacgttataacttggaattgaatacgtccgactacaattct
cctaaatatttcgacaatatcaggaaagctcttgcagcaggattcttcatgcaagtggca
aagaagaggtctggtggtaaagggtatattacagttaaagataatcaggatgtactaatc
catccttctacagttttaggacatgacgctgaatgggtagtttataatgaatttgtcctc
acttcaaagaactatattaggaccgttacatcagtgagaccagaatggttacttgaggtt
gcaccagcttattataaccttgatcatttccaaaagggtgatattaaactttcattagag
aggataaagcaaaaggttgacaagatggaagaactaaataaggaaaggaagtccaagtcc
ggaaaatccaagaagtcgaaaaaataa
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